Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-135f11.1

Gene Name Gene ID Reads Annotation
si:ch211-135f11.1 166 si:ch211-135f11.1, transcript variant X3










Genes with expression patterns similar to si:ch211-135f11.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-135f11.1 166 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-135f11.1, transcript variant X3
2. CU681846.1 CU681846.1 86 2.65 - - - - 0.924 0.734 0.992 - -
3. CABZ01054962.1 CABZ01054962.1 91 2.44 - - - - 0.947 0.765 0.728 - -
4. dnph1 ENSDARG00000075730 403 2.389 - - - - 0.816 0.732 0.841 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
5. rab25a ENSDARG00000058800 451 2.388 - 0.749 0.814 - - - 0.825 - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
6. sgsh ENSDARG00000032087 294 2.194 - 0.718 0.747 - - - - 0.729 - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:ZFIN;Acc:ZDB-GENE-030131-4958]
7. fgf8a ENSDARG00000003399 580 1.929 - - - - - - 0.950 - 0.979 fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
8. zgc:136439 ENSDARG00000009267 720 1.893 - - - - - - 0.904 - 0.989 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
9. ppp6r2b ENSDARG00000069654 323 1.879 - - - - - - - 0.883 0.996 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
10. vcana ENSDARG00000103515 611 1.877 - - - - - - 0.906 - 0.971 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
11. pex7 ENSDARG00000042553 409 1.876 - - - - - - 0.882 - 0.994 peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
12. zgc:158254 ENSDARG00000071233 265 1.871 - - - - 0.896 - - - 0.975 zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
13. pdpk1a ENSDARG00000062304 213 1.869 - - - - - - 0.982 0.887 - 3-phosphoinositide dependent protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-109]
14. mmp9 ENSDARG00000042816 298 1.869 - - - - - - 0.882 - 0.987 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
15. herc3 ENSDARG00000075887 41 1.858 - - 0.903 - 0.955 - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
16. ssh2b ENSDARG00000098955 614 1.855 - - - - - - 0.882 - 0.973 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
17. SUOX ENSDARG00000091574 122 1.852 - - - - - - 0.985 0.867 - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
18. CARD11 ENSDARG00000052741 249 1.841 - - - - - - 0.859 - 0.982 caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
19. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.836 - - - - 0.926 0.910 - - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
20. otx2 766 1.821 - - - - - 0.823 0.998 - - orthodenticle homeobox 2, transcript variant X2
21. lpar6b ENSDARG00000069441 65 1.813 - - 0.822 - - - 0.991 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
22. trpv6 ENSDARG00000014496, ENSDARG00000110671 128 1.812 - - - - - 0.882 0.930 - - transient receptor potential cation channel, subfamily V, member 6 [Source:ZFIN;Acc:ZDB-GENE-040624-12]
23. MON1B_1 MON1B_1 697 1.81 - - - - - - 0.822 - 0.988
24. CABZ01059627.1 ENSDARG00000078394 101 1.809 - - 0.850 - - - 0.959 - -
25. gadd45aa ENSDARG00000043581 114 1.804 - - - - 0.955 - 0.849 - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
26. CR385054.1_1 ENSDARG00000100106 43 1.802 - - - - - 0.910 - 0.892 -
27. fpgt ENSDARG00000042139 155 1.799 - - - - - 0.805 0.994 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
28. sar1b ENSDARG00000103403 1699 1.798 - - - - - - 0.818 - 0.980 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
29. si:ch211-102c2.4 ENSDARG00000079387 101 1.794 - - - - 0.956 0.838 - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
30. CU638740.3 CU638740.3 164 1.783 - - - - - 0.820 0.963 - -
31. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.774 - - - - 0.789 - - - 0.985 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
32. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.771 - - - - - - 0.830 - 0.941 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
33. cyp26c1 ENSDARG00000056029 1426 1.762 - - - - - - 0.945 - 0.817 cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
34. zgc:123295 ENSDARG00000056324 361 1.756 - - - - - 0.898 0.858 - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
35. si:busm1-180g5.7 si:busm1-180g5.7 15 1.753 - 0.757 - - - - 0.996 - -
36. ctgfb ENSDARG00000104292 69 1.753 - 0.757 - - - - 0.996 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
37. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 1.748 - 0.757 - - - - 0.991 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
38. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.746 - - - - - 0.813 0.933 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
39. fubp3 ENSDARG00000086896 21 1.742 - 0.749 - - - - 0.993 - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
40. emc4 ENSDARG00000039268 553 1.741 - - - - - - 0.803 0.938 - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
41. si:ch211-10m5.3 si:ch211-10m5.3 10 1.737 - 0.855 - - - 0.882 - - -
42. si:dkey-7e14.3 ENSDARG00000086055 50 1.732 - - - - 0.962 0.770 - - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
43. si:dkey-163m14.7 65 1.729 - 0.855 - - 0.874 - - - - si:dkey-163m14.7
44. tmem176l.3a ENSDARG00000098387 168 1.725 - - - - - - 0.858 0.867 - transmembrane protein 176l.3a [Source:ZFIN;Acc:ZDB-GENE-080829-13]
45. BX927351.1 ENSDARG00000096844 125 1.72 - - - - - 0.799 0.921 - -
46. chico ENSDARG00000019588 77 1.718 - - 0.834 - - 0.884 - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
47. atp2a3 ENSDARG00000060978 1408 1.711 - - 0.750 - - - - - 0.961 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
48. atrip ENSDARG00000063076 385 1.706 - - - - - 0.818 0.888 - - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
49. bty bty 752 1.702 - - - - - - 0.746 - 0.956
50. TMC6 TMC6 773 1.701 - - - - - - 0.735 - 0.966
51. CABZ01065246.2 CABZ01065246.2 45 1.696 - 0.801 - - - 0.895 - - -
52. cnga3a ENSDARG00000070726 8 1.696 - 0.855 - - - 0.841 - - - cyclic nucleotide gated channel alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090611-2]
53. si:dkey-43f9.4 si:dkey-43f9.4 180 1.683 - 0.765 - - - - 0.918 - -
54. tnfaip8l2b ENSDARG00000046148 1133 1.681 - - - - - 0.756 - - 0.925 tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
55. pigs ENSDARG00000017813 718 1.68 - - - - - - 0.867 0.813 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
56. cbln4 ENSDARG00000061240 67 1.674 - - 0.761 - - - - 0.913 - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
57. CNNM2 CNNM2 225 1.673 - - - - - 0.801 0.872 - -
58. odf3l2 36 1.668 - 0.753 - - - - - 0.915 - outer dense fiber of sperm tails 3-like 2
59. arhgap15 ENSDARG00000062349 28 1.662 - 0.855 - - - - - 0.807 - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
60. BX465851.1 BX465851.1 237 1.655 - 0.757 - - - - 0.898 - -
61. arhgap5 ENSDARG00000061294 2228 1.653 - - - - - - 0.708 - 0.945 Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
62. si:ch211-161h7.8 ENSDARG00000089919 60 1.652 - 0.855 - - - 0.797 - - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
63. vps13d ENSDARG00000017986 183 1.651 - 0.765 - - - - - 0.886 - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
64. si:dkey-4c15.12 ENSDARG00000095350 119 1.644 - - - - - 0.874 - 0.770 - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
65. azi1_1 azi1_1 1375 1.64 - - - - - 0.759 0.881 - -
66. tmem168a ENSDARG00000068705 498 1.637 - - 0.772 - - - 0.865 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
67. si:dkey-56e3.2 ENSDARG00000092551 835 1.632 - - - - - - 0.854 - 0.778 si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
68. si:dkey-11f4.14 ENSDARG00000098461 35 1.626 - - - - - 0.823 0.803 - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
69. slc22a18 ENSDARG00000052271 193 1.621 - - - - - - 0.796 0.825 - solute carrier family 22, member 18 [Source:ZFIN;Acc:ZDB-GENE-051120-165]
70. MDFIC ENSDARG00000074223 781 1.618 - - - - - 0.733 0.885 - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
71. si:ch211-263m18.4 ENSDARG00000093353 27 1.615 - - 0.837 - - 0.778 - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
72. zgc:158852 ENSDARG00000102076 65 1.613 - - - - - 0.703 0.910 - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
73. si:dkey-225k4.1 ENSDARG00000092045 47 1.612 - - - - - 0.763 0.849 - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
74. zgc:162232 zgc:162232 251 1.61 - - - - 0.900 - 0.710 - -
75. grk4_1 ENSDARG00000070448 511 1.609 - - - - - - 0.815 0.794 - G protein-coupled receptor kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-1198]
76. pnp5a ENSDARG00000078619 1461 1.608 - - 0.710 - - - - - 0.898 purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
77. C5H2orf68 C5H2orf68 849 1.605 - - - - - 0.779 - 0.826 -
78. AIM1L AIM1L 899 1.597 - - 0.786 - - - 0.811 - -
79. lmo7a ENSDARG00000004930 2414 1.594 - - 0.729 - - - - - 0.865 LIM domain 7a [Source:ZFIN;Acc:ZDB-GENE-030219-74]
80. zgc:77816 zgc:77816 800 1.589 - 0.706 - - - - 0.883 - -
81. tmem258 ENSDARG00000078785 9578 1.588 - - - - - - 0.772 - 0.816 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
82. ZDHHC21 ENSDARG00000110709 295 1.588 - - - - - - 0.754 0.834 - zinc finger, DHHC-type containing 21 [Source:ZFIN;Acc:ZDB-GENE-080401-2]
83. phf16 phf16 1116 1.579 - - - - - 0.775 0.804 - -
84. aptx ENSDARG00000027143 87 1.578 - 0.733 - - - - - 0.845 - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
85. slc25a39 ENSDARG00000007449 630 1.575 - 0.738 - - 0.837 - - - - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
86. si:dkey-14k9.3 ENSDARG00000045595 256 1.567 - 0.736 - - - 0.831 - - - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
87. chic2 ENSDARG00000022690 184 1.565 - - 0.713 - - - 0.852 - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
88. ddit3 ENSDARG00000059836 334 1.564 - - 0.794 - - 0.770 - - - DNA-damage-inducible transcript 3 [Source:ZFIN;Acc:ZDB-GENE-070410-90]
89. trpm4 trpm4 501 1.562 - - - - - 0.815 0.747 - -
90. dusp22b ENSDARG00000039850 133 1.561 - - - - - 0.760 - 0.801 - dual specificity phosphatase 22b [Source:ZFIN;Acc:ZDB-GENE-050417-257]
91. swap70a ENSDARG00000051819 115 1.557 - - - - - - 0.767 0.790 - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
92. fbln5 ENSDARG00000039273 105 1.548 - - - - - 0.785 - 0.763 - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
93. SPIN4 SPIN4 120 1.542 - - - - 0.733 0.809 - - -
94. ece1 ENSDARG00000061737 91 1.54 - 0.777 0.763 - - - - - - endothelin converting enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-061110-100]
95. rad18 ENSDARG00000027938 574 1.539 - - - - - - 0.790 0.749 - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
96. upb1 ENSDARG00000011521, ENSDARG00000116790 920 1.535 - - 0.713 - - - 0.822 - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
97. tank ENSDARG00000067723 225 1.534 - 0.722 - - - - - 0.812 - TRAF family member-associated NFKB activator [Source:ZFIN;Acc:ZDB-GENE-060929-308]
98. slc25a1b ENSDARG00000076381 6213 1.528 - - 0.752 - - - - - 0.776 slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
99. fnbp1l ENSDARG00000020131 79 1.523 - - 0.822 - - 0.701 - - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
100. gk5 ENSDARG00000062864 738 1.512 - - - - 0.745 - 0.767 - - glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]

There are 2042 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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