Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-133l5.5

Gene Name Gene ID Reads Annotation
si:ch211-133l5.5 si:ch211-133l5.5 123










Genes with expression patterns similar to si:ch211-133l5.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-133l5.5 si:ch211-133l5.5 123 5 - - 1.000 1.000 1.000 - - 1.000 1.000
2. RCVRN_1 RCVRN_1 46 3.978 - - 1.000 0.982 - - - 1.000 0.996
3. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 3.953 - - 1.000 0.990 - - - 0.964 0.999 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
4. ETV3L ETV3L 67 2.998 - - 1.000 - - - - 1.000 0.998
5. gnb3b ENSDARG00000002696 46 2.939 - - - 0.946 - - - 1.000 0.993 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
6. arr3a ENSDARG00000056511, ENSDARG00000114648 192 2.892 - - - 0.897 - - - 1.000 0.995 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
7. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 2.855 - - - 0.901 - - - 0.995 0.959 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
8. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 2.824 - - 0.987 - - - - 0.978 0.859 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
9. guca1g ENSDARG00000045737, ENSDARG00000114717 22 2.737 - - 1.000 0.751 - - - - 0.986 guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
10. saga ENSDARG00000012610 63 2.718 - - - 0.796 - - - 0.988 0.934 S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
11. rpe65a ENSDARG00000007480 52 2.639 - - 0.749 0.919 - - - - 0.971 retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
12. UNC119 UNC119 104 2 - - 1.000 - - - - - 1.000
13. gngt2b ENSDARG00000103543 132 1.999 - - - - - - - 1.000 0.999 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
14. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.996 - - 1.000 - - - - - 0.996 guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
15. CABZ01068819.1 CABZ01068819.1 20 1.991 - - 1.000 - - - - - 0.991
16. sagb ENSDARG00000038378 28 1.991 - - - - - - - 0.998 0.993 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
17. zgc:109965 ENSDARG00000012126 11 1.977 - - 1.000 0.977 - - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
18. slc6a2 ENSDARG00000016141 49 1.962 - - - - - - - 0.999 0.963 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
19. crx ENSDARG00000011989, ENSDARG00000113850 330 1.958 - - 1.000 0.958 - - - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
20. grk7a ENSDARG00000020602 10 1.953 - - - 0.953 - - - - 1.000 G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
21. fut9d ENSDARG00000028098 427 1.947 - - - - - - - 0.963 0.984 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
22. gnat2 ENSDARG00000042529 112 1.946 - - 1.000 - - - - - 0.946 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
23. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.945 - - - - - - - 0.997 0.948 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
24. guk1b ENSDARG00000005776 23 1.93 - - 1.000 - - - - - 0.930 guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
25. si:ch211-130m23.2 ENSDARG00000095136 121 1.916 - - - - - - - 0.982 0.934 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
26. TULP1 TULP1 50 1.909 - - - - - - - 0.992 0.917
27. muc13a ENSDARG00000069559 985 1.901 - - - - - - - 0.985 0.916 mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
28. cck cck 62 1.881 - - 0.935 - - - - 0.946 -
29. dhrs9 ENSDARG00000019260 250 1.875 - - - - - - - 0.949 0.926 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
30. si:ch73-211l2.1 605 1.868 - - - - - - - 0.956 0.912 si:ch73-211l2.1
31. ppp1r3da ENSDARG00000077513 109 1.85 - - - - - - - 0.936 0.914 protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
32. CR974475.2 CR974475.2 38 1.84 - - 0.935 - - - - - 0.905
33. si:ch211-117m20.5 ENSDARG00000091996 7246 1.835 - - - - - - - 0.965 0.870 si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
34. aanat2 ENSDARG00000079802 175 1.821 - - - - - - - 0.902 0.919 arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
35. th ENSDARG00000030621, ENSDARG00000109947 6 1.815 - - 0.928 0.887 - - - - - tyrosine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-990621-5]
36. zgc:163030 ENSDARG00000069192 2963 1.804 - - - - - - - 0.832 0.972 zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
37. NPFFR1 ENSDARG00000111997 29 1.788 - - 0.800 - - - - - 0.988 neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
38. zgc:158340 zgc:158340 21 1.77 - - 0.843 - - - - - 0.927
39. rcvrna ENSDARG00000052223, ENSDARG00000113117 20 1.761 - - - 0.806 - - - - 0.955 recoverin a [Source:ZFIN;Acc:ZDB-GENE-050913-106]
40. ncaldb ENSDARG00000011334 123 1.759 - - - - - - - 0.897 0.862 neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
41. tgm1l4 ENSDARG00000101407 800 1.745 - - - - - - - 0.872 0.873 transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
42. scamp2l ENSDARG00000017010 491 1.743 - - - - - - - 0.837 0.906 secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
43. phlda3 ENSDARG00000037804 1116 1.743 - - - - - - - 0.922 0.821 pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
44. SLC5A8 ENSDARG00000087120 60 1.733 - - - - 0.799 - - 0.934 - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
45. flh flh 47 1.723 - - 0.735 0.988 - - - - -
46. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.722 - - - - - - - 0.827 0.895 plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
47. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1.704 - - - - - - - 0.768 0.936 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
48. ap1s3b ENSDARG00000027966 1064 1.692 - - - - - - - 0.869 0.823 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
49. cyp26a1 ENSDARG00000033999 1136 1.676 - - - - - - - 0.773 0.903 cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
50. rbp4l ENSDARG00000044684 3292 1.671 - - - - - - - 0.913 0.758 retinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
51. casp9 ENSDARG00000004325 306 1.67 - - - - - - - 0.942 0.728 caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
52. CABZ01048956.1 ENSDARG00000117474 253 1.669 - - - - - - - 0.712 0.957 probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
53. otud3 ENSDARG00000022648 263 1.641 - - - - - - - 0.894 0.747 OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
54. fam46ba 4575 1.64 - - - - - - - 0.849 0.791 family with sequence similarity 46, member Ba
55. CCDC64B CCDC64B 337 1.622 - - - - - - - 0.820 0.802
56. exosc2 ENSDARG00000028688 726 1.573 - - - - - - - 0.809 0.764 exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
57. sh3bp5b ENSDARG00000103978 513 1.55 - - - - - - - 0.828 0.722 SH3-domain binding protein 5b (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2813]
58. kcnab2b ENSDARG00000062134 80 1.54 - - - - 0.830 - - - 0.710 potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
59. FRMPD1_2 FRMPD1_2 2 1 - - 1.000 - - - - - -
60. SCARNA6 SCARNA6 258 1 - - 1.000 - - - - - -
61. CABZ01087025.1 ENSDARG00000117232 10 1 - - 1.000 - - - - - -
62. ntm ENSDARG00000018065 1 1 - - 1.000 - - - - - - neurotrimin [Source:ZFIN;Acc:ZDB-GENE-060421-6020]
63. kcnj1a.6 ENSDARG00000088484 4 1 - - 1.000 - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-050420-272]
64. tmx3 5 1 - - 1.000 - - - - - - thioredoxin-related transmembrane protein 3
65. CABZ01055343.4 CABZ01055343.4 9 1 - - 1.000 - - - - - -
66. ENKD1 ENSDARG00000043550 44 1 - - 1.000 - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
67. prdm11 ENSDARG00000074468 2 1 - - 1.000 - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
68. si:ch1073-188e1.1 ENSDARG00000074085 0 1 - - 1.000 - - - - - - si:ch1073-188e1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-5]
69. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - - 1.000 - - - - - -
70. si:dkey-242e21.4 1 1 - - 1.000 - - - - - - si:dkey-242e21.4
71. plp1b ENSDARG00000011929 8 1 - - 1.000 - - - - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
72. SNORD15_1 SNORD15_1 1 1 - - 1.000 - - - - - -
73. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - 1.000 - - - - - -
74. cnga3a ENSDARG00000070726 8 1 - - 1.000 - - - - - - cyclic nucleotide gated channel alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090611-2]
75. si:ch211-1e14.1 ENSDARG00000063361, ENSDARG00000114300 0 1 - - 1.000 - - - - - - si:ch211-1e14.1 [Source:ZFIN;Acc:ZDB-GENE-050420-149]
76. pde8b ENSDARG00000063706 1 1 - - 1.000 - - - - - - phosphodiesterase 8B [Source:ZFIN;Acc:ZDB-GENE-091117-3]
77. zgc:113293 ENSDARG00000038271 0 1 - - 1.000 - - - - - - zgc:113293 [Source:ZFIN;Acc:ZDB-GENE-050417-453]
78. adam10b ENSDARG00000015502 26 1 - - 1.000 - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
79. si:dkey-254e13.12 si:dkey-254e13.12 1 1 - - 1.000 - - - - - -
80. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1 - - 1.000 - - - - - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
81. si:dkey-151m22.8 ENSDARG00000095934 41 1 - - 1.000 - - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
82. si:ch211-284e13.12 ENSDARG00000094492 0 1 - - 1.000 - - - - - - si:ch211-284e13.12 [Source:ZFIN;Acc:ZDB-GENE-060526-158]
83. badb ENSDARG00000054937, ENSDARG00000114609 11 1 - - 1.000 - - - - - - BCL2 associated agonist of cell death b [Source:ZFIN;Acc:ZDB-GENE-000616-1]
84. taar10b ENSDARG00000090592 0 1 - - 1.000 - - - - - - trace amine-associated receptor 10b [Source:ZFIN;Acc:ZDB-GENE-041014-67]
85. C20H2orf71 C20H2orf71 2 1 - - 1.000 - - - - - -
86. COL9A3 ENSDARG00000037845 1 1 - - 1.000 - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
87. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - 1.000 - - - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
88. KSR1_1 KSR1_1 1 1 - - 1.000 - - - - - -
89. WASF3 WASF3 1 1 - - 1.000 - - - - - -
90. SYNPR ENSDARG00000037587 20 1 - - 1.000 - - - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
91. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - 1.000 - - - - - -
92. klf9 ENSDARG00000068194 5 1 - - 1.000 - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
93. MOB2 MOB2 4 1 - - 1.000 - - - - - -
94. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - 1.000 - - - - - -
95. SPTBN4 ENSDARG00000092624 6 1 - - 1.000 - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
96. tk1 ENSDARG00000102245 1 1 - - 1.000 - - - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
97. WASF1 ENSDARG00000060349 1 1 - - 1.000 - - - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
98. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - 1.000 - - - - - -
99. erlec1 ENSDARG00000086309 1 1 - - 1.000 - - - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
100. si:ch211-166e11.1 si:ch211-166e11.1 1 1 - - 1.000 - - - - - -

There are 841 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA