Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-131e11.21

Gene Name Gene ID Reads Annotation
si:ch211-131e11.21 si:ch211-131e11.21 1










Genes with expression patterns similar to si:ch211-131e11.21

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-254e13.13 si:dkey-254e13.13 6 1 1.000 - - - - - - - -
2. UBASH3B_1 UBASH3B_1 28 1 1.000 - - - - - - - -
3. NYAP2 NYAP2 7 1 1.000 - - - - - - - -
4. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 1.000 - - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
5. zgc:112234_6 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 4 1 1.000 - - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
6. TENM3 ENSDARG00000005479 39 1 1.000 - - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
7. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 1.000 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
8. si:ch211-113a14.15 3 1 1.000 - - - - - - - - si:ch211-113a14.15
9. hsf4 ENSDARG00000013251 5 1 1.000 - - - - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
10. prdm1b ENSDARG00000098925 440 1 1.000 - - - - - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
11. TRIM35 TRIM35 100 1 1.000 - - - - - - - -
12. grin2ab ENSDARG00000070543 31 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
13. lrrc18b ENSDARG00000076236 5 1 1.000 - - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
14. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
15. si:ch211-265g21.1 si:ch211-265g21.1 35 1 1.000 - - - - - - - -
16. mir196b ENSDARG00000081346 35 1 1.000 - - - - - - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
17. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
18. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
19. dock11 ENSDARG00000062485 17 1 1.000 - - - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
20. si:dkey-113d16.9 si:dkey-113d16.9 345 1 1.000 - - - - - - - -
21. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
22. gpat2 ENSDARG00000053575 12 1 1.000 - - - - - - - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
23. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
24. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
25. CD200_2 CD200_2 47 1 1.000 - - - - - - - -
26. man2a1 ENSDARG00000102200 12 1 1.000 - - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
27. pxmp2 ENSDARG00000003144 50 1 1.000 - - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
28. tmem184b tmem184b 2 1 1.000 - - - - - - - -
29. VWDE_1 VWDE_1 2 1 1.000 - - - - - - - -
30. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
31. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
32. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
33. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
34. gdf7 ENSDARG00000042784 36 1 1.000 - - - - - - - - growth differentiation factor 7 [Source:ZFIN;Acc:ZDB-GENE-990714-1]
35. nfatc1 ENSDARG00000036168 16 1 1.000 - - - - - - - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
36. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
37. U5_3 U5_3 3 1 1.000 - - - - - - - -
38. cthrc1b ENSDARG00000001971 44 1 1.000 - - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
39. CR383676.3_2 CR383676.3_2 9 1 1.000 - - - - - - - -
40. CAMK1 CAMK1 28 1 1.000 - - - - - - - -
41. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
42. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1 1.000 - - - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
43. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
44. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
45. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
46. CD200_1 CD200_1 1 1 1.000 - - - - - - - -
47. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 1.000 - - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
48. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
49. mir22a-1 mir22a-1 192 1 1.000 - - - - - - - -
50. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
51. mea1 ENSDARG00000039820 589 1 1.000 - - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
52. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
53. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 1.000 - - - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
54. si:ch211-187d1.3 si:ch211-187d1.3 1 1 1.000 - - - - - - - -
55. sorbs2a ENSDARG00000003046 242 1 1.000 - - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
56. cpeb1b ENSDARG00000008454 37 1 1.000 - - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
57. nsun5_1 ENSDARG00000043209 3 1 1.000 - - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
58. si:ch211-237l4.6 ENSDARG00000056915 49 1 1.000 - - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
59. cpa5 ENSDARG00000021339 61 1 1.000 - - - - - - - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
60. styx ENSDARG00000057699 48 1 1.000 - - - - - - - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
61. pcdh1g18 ENSDARG00000099447 7 1 1.000 - - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
62. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
63. SLC1A7 SLC1A7 3 1 1.000 - - - - - - - -
64. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
65. cdk5r1a ENSDARG00000037916 46 1 1.000 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
66. si:ch211-131e11.21 si:ch211-131e11.21 1 1 1.000 - - - - - - - -
67. flj13639 ENSDARG00000010764 29 1 1.000 - - - - - - - - flj13639 [Source:ZFIN;Acc:ZDB-GENE-030131-8104]
68. si:ch211-235f12.5 si:ch211-235f12.5 1 1 1.000 - - - - - - - -
69. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
70. fam221a ENSDARG00000027599 1 1 1.000 - - - - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
71. PLEKHS1_1 PLEKHS1_1 23 1 1.000 - - - - - - - -
72. nt5c1ba ENSDARG00000018153 31 1 1.000 - - - - - - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
73. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
74. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
75. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
76. NPFFR1 ENSDARG00000111997 29 1 1.000 - - - - - - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
77. FP236162.1 FP236162.1 2 1 1.000 - - - - - - - -
78. PARP9 ENSDARG00000006848 34 1 1.000 - - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
79. foxq1a ENSDARG00000030896 121 1 1.000 - - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
80. bmp8a ENSDARG00000035677 40 1 1.000 - - - - - - - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
81. zgc:154040 16 1 1.000 - - - - - - - - zgc:154040
82. lingo2 lingo2 67 1 1.000 - - - - - - - -
83. st8sia3 ENSDARG00000045301 3 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
84. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
85. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
86. fancg ENSDARG00000024967, ENSDARG00000113462 82 1 1.000 - - - - - - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
87. ccnd3 ENSDARG00000027391 1 1 1.000 - - - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
88. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
89. CU929052.1 CU929052.1 642 1 1.000 - - - - - - - -
90. si:dkey-14d8.7 ENSDARG00000045834 5 1 1.000 - - - - - - - - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
91. si:dkey-14d8.9 si:dkey-14d8.9 66 1 1.000 - - - - - - - -
92. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 1.000 - - - - - - - -
93. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
94. kirrel3a ENSDARG00000075806 36 0.957 0.957 - - - - - - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
95. ppp1r3db ENSDARG00000076248 32 0.957 0.957 - - - - - - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
96. blm ENSDARG00000077089 245 0.938 0.938 - - - - - - - - Bloom syndrome, RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-070702-5]
97. C2CD4A ENSDARG00000061416 61 0.935 0.935 - - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
98. fam136a ENSDARG00000098401 50 0.926 0.926 - - - - - - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
99. mxra8b ENSDARG00000062129 1004 0.924 0.924 - - - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
100. si:dkey-30j22.1 ENSDARG00000042829 25 0.924 0.924 - - - - - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]

There are 82 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA