Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-131e11.16

Gene Name Gene ID Reads Annotation
si:ch211-131e11.16 si:ch211-131e11.16 111










Genes with expression patterns similar to si:ch211-131e11.16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-131e11.16 si:ch211-131e11.16 111 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. traf3ip1 ENSDARG00000010300 69 1.729 - - - - 0.868 0.861 - - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
3. si:ch211-119c24.1 si:ch211-119c24.1 17 1.723 - - - - - 0.932 - 0.791 -
4. RAP1GAP2_1 RAP1GAP2_1 80 1.668 0.872 - - - - 0.796 - - -
5. BX004785.5 BX004785.5 35 1.625 - - - - - 0.901 0.724 - -
6. MAP4 MAP4 315 1.622 0.862 - - - - - 0.760 - -
7. zgc:173709 86 1.613 - - - - - 0.854 0.759 - - zgc:173709
8. kdm5bb ENSDARG00000003098 531 1.592 - 0.727 - - - 0.865 - - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
9. antxr1a ENSDARG00000025672 32 1.56 - - - - 0.709 0.851 - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
10. si:dkey-14k9.3 ENSDARG00000045595 256 1.537 - - - - - 0.830 0.707 - - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
11. RBBP8NL RBBP8NL 813 1.534 - 0.791 - - - 0.743 - - -
12. adcy5 ENSDARG00000091342 122 1.509 - - 0.712 - - 0.797 - - - adenylate cyclase 5 [Source:ZFIN;Acc:ZDB-GENE-081104-470]
13. SEMA7A ENSDARG00000078707 465 1.494 - 0.723 - - - - 0.771 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
14. pdzrn4 ENSDARG00000045687 362 1.484 - - 0.714 - - - 0.770 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
15. si:dkey-22l11.6 ENSDARG00000070126 27 1.48 - - - - 0.721 - 0.759 - - si:dkey-22l11.6 [Source:ZFIN;Acc:ZDB-GENE-041210-251]
16. sypb ENSDARG00000002230 262 1.458 - 0.715 - - - - 0.743 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
17. SPIN4 SPIN4 120 1.457 - - 0.727 - - - 0.730 - -
18. si:ch211-199m9.3 50 0.983 - - - - - 0.983 - - - si:ch211-199m9.3, transcript variant X3
19. pdxka ENSDARG00000088959 217 0.981 - - - - - 0.981 - - - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
20. gpc2 ENSDARG00000104217 10 0.972 - - - - - 0.972 - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
21. si:dkey-7e14.3 ENSDARG00000086055 50 0.972 - - - - - 0.972 - - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
22. UBAC2 ENSDARG00000093065, ENSDARG00000116281, ENSDARG00000116596 16 0.972 - - - - - 0.972 - - - UBA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-2122]
23. syne2a 63 0.959 - - - - - 0.959 - - - spectrin repeat containing, nuclear envelope 2a
24. invs ENSDARG00000002213 261 0.951 - - - - - 0.951 - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
25. cep44 ENSDARG00000053106 683 0.949 - - - - - 0.949 - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
26. setd1ba ENSDARG00000060847, ENSDARG00000111265 146 0.948 - - - - - 0.948 - - - SET domain containing 1B, a [Source:ZFIN;Acc:ZDB-GENE-050309-289]
27. CNNM2 CNNM2 225 0.946 - - - - - 0.946 - - -
28. SNORD38 SNORD38 171 0.944 - - - - - 0.944 - - -
29. pou5f3 ENSDARG00000044774 212 0.943 - - - - - 0.943 - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
30. ZNF341 ENSDARG00000103725 6 0.942 - - - - - 0.942 - - - zinc finger protein 341 [Source:ZFIN;Acc:ZDB-GENE-080204-99]
31. fopnl ENSDARG00000071198 1002 0.94 - - - - - 0.940 - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
32. nos1 ENSDARG00000068910 399 0.939 - - - - - 0.939 - - - nitric oxide synthase 1 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-001101-1]
33. anapc4 ENSDARG00000032237 385 0.939 - - - - - 0.939 - - - anaphase promoting complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041212-10]
34. SNORD30 SNORD30 34 0.939 - - - - - 0.939 - - -
35. SLC7A8 SLC7A8 25 0.939 - - - - - 0.939 - - -
36. ca4c ENSDARG00000044512 102 0.938 - - - - - 0.938 - - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
37. AMDHD1 ENSDARG00000007366 89 0.932 - - - - - 0.932 - - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
38. vax2 ENSDARG00000058702 175 0.932 - - - - - 0.932 - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
39. fbln5 ENSDARG00000039273 105 0.932 - - - - - 0.932 - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
40. muc13a ENSDARG00000069559 985 0.93 - - - - - 0.930 - - - mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
41. FAM120A ENSDARG00000075021 73 0.93 - - - - - 0.930 - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
42. trim24 ENSDARG00000103350 431 0.926 - - - - - 0.926 - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
43. si:dkeyp-72e1.7 ENSDARG00000104457 169 0.921 - - - - - 0.921 - - - si:dkeyp-72e1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-229]
44. znf804a ENSDARG00000027079 121 0.921 - - - - - - 0.921 - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
45. si:dkey-23a17.1 si:dkey-23a17.1 15 0.92 - - - - - 0.920 - - -
46. agmo ENSDARG00000025595 42 0.92 - - - - - 0.920 - - - alkylglycerol monooxygenase [Source:ZFIN;Acc:ZDB-GENE-040426-2207]
47. map7d2a ENSDARG00000068480 513 0.918 - - - - - - 0.918 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
48. NMUR1 NMUR1 30 0.918 - - - - - 0.918 - - -
49. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 0.918 - - - - - 0.918 - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
50. adcyap1a ENSDARG00000004015 67 0.918 - - - - - 0.918 - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
51. otx2 766 0.918 - - - - - 0.918 - - - orthodenticle homeobox 2, transcript variant X2
52. fosl1a ENSDARG00000015355 139 0.918 - - - - - 0.918 - - - FOS-like antigen 1a [Source:ZFIN;Acc:ZDB-GENE-061207-7]
53. NSUN6 ENSDARG00000103478 29 0.918 - - - - - 0.918 - - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
54. si:dkey-11f4.14 ENSDARG00000098461 35 0.918 - - - - - 0.918 - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
55. PTPDC1_1 PTPDC1_1 12 0.918 - - - - - 0.918 - - -
56. C5H2orf68 C5H2orf68 849 0.917 - - - - - 0.917 - - -
57. celf3b ENSDARG00000006983 171 0.917 - - - - - - 0.917 - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
58. braf ENSDARG00000017661 106 0.917 - - - - - - 0.917 - - B-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040805-1]
59. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 0.917 - - - - - - 0.917 - - methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
60. aldh3b1 ENSDARG00000013839 796 0.916 - - - - - 0.916 - - - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
61. GDPD4 GDPD4 513 0.915 - - - - - 0.915 - - -
62. CU104700.1 CU104700.1 114 0.914 - - - - - 0.914 - - -
63. hoxc13b ENSDARG00000113877 549 0.914 - - - - - 0.914 - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
64. si:dkey-220o10.1 si:dkey-220o10.1 63 0.914 - - - - - 0.914 - - -
65. trpc2 trpc2 10 0.913 - - - - - 0.913 - - -
66. BX004785.2 ENSDARG00000093487 10 0.913 - - - - - 0.913 - - -
67. neurod6b ENSDARG00000020794 164 0.913 - - - - - 0.913 - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
68. iffo1a ENSDARG00000062976 5 0.913 - - - - - 0.913 - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
69. scospondin ENSDARG00000067859 4 0.913 - - - - - 0.913 - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
70. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 0.913 - - - - - 0.913 - - - abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
71. itln3 ENSDARG00000003523 3 0.913 - - - - - 0.913 - - - intelectin 3 [Source:ZFIN;Acc:ZDB-GENE-090527-4]
72. CT583679.1 CT583679.1 11 0.913 - - - - - 0.913 - - -
73. PLEKHG3 72 0.913 - - - - - 0.913 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
74. tmem196b ENSDARG00000090140 20 0.913 - - - - - 0.913 - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
75. si:dkey-9i23.6 ENSDARG00000094678 58 0.913 - - - - - 0.913 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
76. sybu ENSDARG00000060112 22 0.913 - - - - - 0.913 - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
77. CABZ01085657.1 CABZ01085657.1 23 0.913 - - - - - 0.913 - - -
78. SDSL ENSDARG00000074698 34 0.913 - - - - - 0.913 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
79. si:dkey-94e7.2 ENSDARG00000068474 14 0.913 - - - - - 0.913 - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
80. CR790363.1 ENSDARG00000097364 145 0.913 - - - - - 0.913 - - -
81. rpn2 ENSDARG00000009724 322 0.913 - - - - - 0.913 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
82. zgc:174696 ENSDARG00000110658 67 0.913 - - - - - 0.913 - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
83. SLC1A7 SLC1A7 3 0.913 - - - - - 0.913 - - -
84. si:dkey-229d11.3 ENSDARG00000093255 41 0.913 - - - - - 0.913 - - - si:dkey-229d11.3 [Source:ZFIN;Acc:ZDB-GENE-091117-40]
85. PLEKHS1_2 PLEKHS1_2 21 0.913 - - - - - 0.913 - - -
86. ptprua ENSDARG00000092638 479 0.913 - - - - - 0.913 - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
87. gabrr2b ENSDARG00000014057 9 0.913 - - - - - 0.913 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
88. bend5 ENSDARG00000075624 10 0.913 - - - - - 0.913 - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
89. 5_8S_rRNA 5_8S_rRNA 24 0.913 - - - - - 0.913 - - -
90. si:ch211-212k5.2 si:ch211-212k5.2 152 0.913 - - - - - 0.913 - - -
91. CABZ01118004.1 ENSDARG00000117218 2 0.913 - - - - - 0.913 - - -
92. pde6c ENSDARG00000100397 49 0.913 - - - - - 0.913 - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
93. exoc4 ENSDARG00000004336 32 0.913 - - - - - 0.913 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
94. BX005085.3 ENSDARG00000103450 45 0.913 - - - - - 0.913 - - -
95. SLC2A4RG SLC2A4RG 47 0.913 - - - - - 0.913 - - -
96. mxd ENSDARG00000023369 8 0.913 - - - - - 0.913 - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
97. CABZ01092722.1 CABZ01092722.1 2 0.913 - - - - - 0.913 - - -
98. ssr1 ENSDARG00000101627 151 0.913 - - - - - 0.913 - - - signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
99. sowahaa ENSDARG00000077861 3 0.913 - - - - - 0.913 - - - sosondowah ankyrin repeat domain family member Aa [Source:ZFIN;Acc:ZDB-GENE-100910-3]
100. slc27a6 ENSDARG00000046053 57 0.913 - - - - - 0.913 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]

There are 1284 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA