Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-128b10.5

Gene Name Gene ID Reads Annotation
si:ch211-128b10.5 si:ch211-128b10.5 3










Genes with expression patterns similar to si:ch211-128b10.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-128b10.5 si:ch211-128b10.5 3 3 - - - 1.000 1.000 - - - 1.000
2. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1.944 - - - 1.000 - - - - 0.944 aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
3. si:dkey-9i5.4 si:dkey-9i5.4 14 1.847 - - - 0.847 1.000 - - - -
4. si:ch73-211l2.3 ENSDARG00000075932 4 1.749 - - - - 1.000 - - - 0.749 si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
5. si:ch211-128b10.4 si:ch211-128b10.4 3 1.702 - - - 0.702 1.000 - - - -
6. Metazoa_SRP_30 Metazoa_SRP_30 10 1 - - - - 1.000 - - - -
7. si:ch211-207l22.1 si:ch211-207l22.1 1 1 - - - - 1.000 - - - -
8. CR753866.2 CR753866.2 6 1 - - - - 1.000 - - - -
9. SLC22A23_2 SLC22A23_2 0 1 - - - - 1.000 - - - -
10. or102-3 ENSDARG00000074966 0 1 - - - - 1.000 - - - - odorant receptor, family C, subfamily 102, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-3]
11. zgc:153704 ENSDARG00000045979 11 1 - - - - 1.000 - - - - zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
12. U1_34 U1_34 0 1 - - - - 1.000 - - - -
13. sult1st2 ENSDARG00000041540 1 1 - - - - 1.000 - - - - sulfotransferase family 1, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-27]
14. RNaseP_nuc_2 RNaseP_nuc_2 0 1 - - - - 1.000 - - - -
15. si:dkey-51d8.2 si:dkey-51d8.2 0 1 - - - - 1.000 - - - -
16. si:ch73-138e16.4 ENSDARG00000102363 0 1 - - - - 1.000 - - - - si:ch73-138e16.4 [Source:ZFIN;Acc:ZDB-GENE-070705-203]
17. CLCN2 CLCN2 8 1 - - - - 1.000 - - - -
18. ZNF70_13 ZNF70_13 1 1 - - - - 1.000 - - - -
19. trpc2 trpc2 10 1 - - - 1.000 - - - - -
20. si:dkey-56e5.2 si:dkey-56e5.2 14 1 - - - - 1.000 - - - -
21. si:dkey-220o5.5 ENSDARG00000099211 0 1 - - - - 1.000 - - - - si:dkey-220o5.5 [Source:ZFIN;Acc:ZDB-GENE-081104-376]
22. calhm3 ENSDARG00000079602 4 1 - - - - 1.000 - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
23. si:dkey-34e4.1 ENSDARG00000022085 5 1 - - - - 1.000 - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
24. suv39h1a ENSDARG00000026799 18 1 - - - - 1.000 - - - - suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111]
25. cdx1a ENSDARG00000114554 28 1 - - - 1.000 - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
26. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - 1.000 - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
27. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - 1.000 - - - - -
28. or137-1 ENSDARG00000105789 2 1 - - - - 1.000 - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
29. si:ch1073-15f19.2 ENSDARG00000095640 4 1 - - - - 1.000 - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
30. si:ch211-79g12.1 ENSDARG00000116692 2 1 - - - - 1.000 - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
31. MUC5B MUC5B 1 1 - - - - 1.000 - - - -
32. CABZ01076758.1 ENSDARG00000100810 3 1 - - - - 1.000 - - - -
33. AL935141.5 AL935141.5 24 1 - - - - 1.000 - - - -
34. bmpr1ab ENSDARG00000105045 2 1 - - - - 1.000 - - - - bone morphogenetic protein receptor, type IAb [Source:ZFIN;Acc:ZDB-GENE-040912-150]
35. ms4a17a.1 ENSDARG00000043798 7 1 - - - 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
36. USP2 USP2 157 1 - - - - 1.000 - - - -
37. BX088525.2 ENSDARG00000117222 11 1 - - - - 1.000 - - - -
38. CABZ01076817.1 CABZ01076817.1 4 1 - - - - 1.000 - - - -
39. si:dkey-13k17.1 si:dkey-13k17.1 2 1 - - - - 1.000 - - - -
40. GSTK1_2 GSTK1_2 8 1 - - - - 1.000 - - - -
41. irf1b ENSDARG00000043249 30 1 - - - - 1.000 - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
42. irbp 2 1 - - - 1.000 - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
43. illr3 ENSDARG00000018327 5 1 - - - - 1.000 - - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
44. kcnf1b ENSDARG00000027285 2 1 - - - 1.000 - - - - - potassium voltage-gated channel, subfamily F, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-39]
45. CU367845.1_1 CU367845.1_1 43 1 - - - 1.000 - - - - -
46. acsl6 0 1 - - - - 1.000 - - - - acyl-CoA synthetase long-chain family member 6
47. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - - - - 1.000 - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
48. tmem144b ENSDARG00000036247 2 1 - - - - 1.000 - - - - transmembrane protein 144b [Source:ZFIN;Acc:ZDB-GENE-041010-58]
49. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 - - - 1.000 - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
50. CABZ01072853.1 CABZ01072853.1 35 1 - - - - 1.000 - - - -
51. BX469930.1 ENSDARG00000092358 3 1 - - - - 1.000 - - - -
52. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - 1.000 - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
53. pcdh15b ENSDARG00000008127 2 1 - - - - 1.000 - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
54. PLCH2 PLCH2 3 1 - - - 1.000 - - - - -
55. nyx ENSDARG00000061791 2 1 - - - 1.000 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
56. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - 1.000 - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
57. espnla ENSDARG00000078211 8 1 - - - - 1.000 - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
58. DDO_1 DDO_1 5 1 - - - - 1.000 - - - -
59. zgc:162971 ENSDARG00000101093 1 1 - - - - 1.000 - - - - zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
60. U1_31 U1_31 0 1 - - - - 1.000 - - - -
61. agbl5 ENSDARG00000045900 2 1 - - - - 1.000 - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
62. CU693477.1 CU693477.1 7 1 - - - - 1.000 - - - -
63. zgc:173603 zgc:173603 2 1 - - - - 1.000 - - - -
64. CR392006.2 CR392006.2 0 1 - - - - 1.000 - - - -
65. CABZ01040931.1 ENSDARG00000099474 0 1 - - - - 1.000 - - - -
66. si:ch211-224l10.5 si:ch211-224l10.5 1 1 - - - 1.000 - - - - -
67. rfc4 ENSDARG00000042458 2 1 - - - 1.000 - - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
68. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 - - - - 1.000 - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
69. si:ch211-278f21.5 si:ch211-278f21.5 1 1 - - - 1.000 - - - - -
70. mamdc2a ENSDARG00000098345 21 1 - - - - 1.000 - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
71. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - 1.000 - - - -
72. MEIS2 MEIS2 3 1 - - - - 1.000 - - - -
73. si:ch211-210m1.3 si:ch211-210m1.3 2 1 - - - 1.000 - - - - -
74. CABZ01086835.1 ENSDARG00000110902 0 1 - - - - 1.000 - - - - synaptotagmin-4-like [Source:NCBI gene;Acc:101884989]
75. pnocb ENSDARG00000024189 18 1 - - - - 1.000 - - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
76. BX000477.1 BX000477.1 1 1 - - - - 1.000 - - - -
77. CABZ01031627.2 CABZ01031627.2 1 1 - - - - 1.000 - - - -
78. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 - - - - 1.000 - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
79. CRYGM4 ENSDARG00000008219 1 1 - - - 1.000 - - - - - crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
80. ENSDARG00000091583 ENSDARG00000091583 0 1 - - - - 1.000 - - - -
81. si:ch211-15p9.2 ENSDARG00000062241 1 1 - - - - 1.000 - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
82. nitr7b ENSDARG00000067977 0 1 - - - - 1.000 - - - - novel immune-type receptor 7b [Source:ZFIN;Acc:ZDB-GENE-041001-8]
83. TMEM150B TMEM150B 1 1 - - - - 1.000 - - - -
84. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - - - 1.000 - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
85. si:dkey-254e13.12 si:dkey-254e13.12 1 1 - - - - 1.000 - - - -
86. mir430c-2 2 1 - - - - 1.000 - - - - microRNA 430c-2
87. ENDOD1_4 ENDOD1_4 2 1 - - - - 1.000 - - - -
88. CLTCL1_2 CLTCL1_2 1 1 - - - - 1.000 - - - -
89. zgc:113343 ENSDARG00000103196 2 1 - - - - 1.000 - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
90. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - 1.000 - - - -
91. CABZ01069745.1 CABZ01069745.1 0 1 - - - - 1.000 - - - -
92. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - 1.000 - - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
93. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - 1.000 - - - -
94. ROCK2_2 ROCK2_2 0 1 - - - - 1.000 - - - -
95. CR318624.1 ENSDARG00000094618 5 1 - - - 1.000 - - - - -
96. gucy2f ENSDARG00000025504 6 1 - - - 1.000 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
97. gatsl3 7 1 - - - - 1.000 - - - - GATS protein-like 3
98. LRRC69 LRRC69 1 1 - - - - 1.000 - - - -
99. KBTBD11 ENSDARG00000104958 8 1 - - - - 1.000 - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
100. SEMA4D ENSDARG00000067801 5 1 - - - - 1.000 - - - - semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA