Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-128b10.5

Gene Name Gene ID Reads Annotation
si:ch211-128b10.5 si:ch211-128b10.5 3










Genes with expression patterns similar to si:ch211-128b10.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-128b10.5 si:ch211-128b10.5 3 3 - - - 1.000 1.000 - - - 1.000
2. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1.944 - - - 1.000 - - - - 0.944 aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
3. si:dkey-9i5.4 si:dkey-9i5.4 14 1.847 - - - 0.847 1.000 - - - -
4. si:ch73-211l2.3 ENSDARG00000075932 4 1.749 - - - - 1.000 - - - 0.749 si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
5. si:ch211-128b10.4 si:ch211-128b10.4 3 1.702 - - - 0.702 1.000 - - - -
6. MEIS2 MEIS2 3 1 - - - - 1.000 - - - -
7. si:dkey-29p23.2 ENSDARG00000113192 2 1 - - - - 1.000 - - - - si:dkey-29p23.2 [Source:ZFIN;Acc:ZDB-GENE-110914-51]
8. AL935141.5 AL935141.5 24 1 - - - - 1.000 - - - -
9. TMCC1_1 TMCC1_1 1 1 - - - 1.000 - - - - -
10. irbp 2 1 - - - 1.000 - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
11. CU693477.1 CU693477.1 7 1 - - - - 1.000 - - - -
12. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - 1.000 - - - -
13. LRCH4 ENSDARG00000068258 22 1 - - - - 1.000 - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
14. glsa ENSDARG00000062812 1 1 - - - - 1.000 - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
15. si:ch211-207l22.1 si:ch211-207l22.1 1 1 - - - - 1.000 - - - -
16. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - 1.000 - - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
17. tmem144b ENSDARG00000036247 2 1 - - - - 1.000 - - - - transmembrane protein 144b [Source:ZFIN;Acc:ZDB-GENE-041010-58]
18. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - 1.000 - - - - -
19. BX469930.1 ENSDARG00000092358 3 1 - - - - 1.000 - - - -
20. si:dkey-51d8.2 si:dkey-51d8.2 0 1 - - - - 1.000 - - - -
21. SEMA4D ENSDARG00000067801 5 1 - - - - 1.000 - - - - semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]
22. CABZ01086835.1 ENSDARG00000110902 0 1 - - - - 1.000 - - - - synaptotagmin-4-like [Source:NCBI gene;Acc:101884989]
23. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - 1.000 - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
24. CR318624.1 ENSDARG00000094618 5 1 - - - 1.000 - - - - -
25. ROCK2_2 ROCK2_2 0 1 - - - - 1.000 - - - -
26. cdx1a ENSDARG00000114554 28 1 - - - 1.000 - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
27. zgc:173652 22 1 - - - - 1.000 - - - - zgc:173652
28. opn1sw1 ENSDARG00000045677 1 1 - - - - 1.000 - - - - opsin 1 (cone pigments), short-wave-sensitive 1 [Source:ZFIN;Acc:ZDB-GENE-991109-25]
29. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 - - - 1.000 - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
30. si:ch211-276k2.2 4 1 - - - 1.000 - - - - - si:ch211-276k2.2
31. ENSDARG00000091583 ENSDARG00000091583 0 1 - - - - 1.000 - - - -
32. ddx46 ENSDARG00000099458 24 1 - - - - 1.000 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
33. calhm3 ENSDARG00000079602 4 1 - - - - 1.000 - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
34. PLB1 PLB1 20 1 - - - - 1.000 - - - -
35. BX901974.1 ENSDARG00000067592 2 1 - - - 1.000 - - - - -
36. CABZ01040931.1 ENSDARG00000099474 0 1 - - - - 1.000 - - - -
37. si:ch211-278f21.5 si:ch211-278f21.5 1 1 - - - 1.000 - - - - -
38. CABZ01031627.2 CABZ01031627.2 1 1 - - - - 1.000 - - - -
39. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - 1.000 - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
40. si:ch211-79g12.1 ENSDARG00000116692 2 1 - - - - 1.000 - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
41. si:dkey-13k17.1 si:dkey-13k17.1 2 1 - - - - 1.000 - - - -
42. ADAD1 ENSDARG00000089181 9 1 - - - - 1.000 - - - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
43. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - 1.000 - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
44. espnla ENSDARG00000078211 8 1 - - - - 1.000 - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
45. U1_31 U1_31 0 1 - - - - 1.000 - - - -
46. USP2 USP2 157 1 - - - - 1.000 - - - -
47. TMEM150B TMEM150B 1 1 - - - - 1.000 - - - -
48. CABZ01076817.1 CABZ01076817.1 4 1 - - - - 1.000 - - - -
49. si:dkey-254e13.12 si:dkey-254e13.12 1 1 - - - - 1.000 - - - -
50. CT737190.1 ENSDARG00000091514 1 1 - - - 1.000 - - - - - si:dkey-286h2.5 [Source:NCBI gene;Acc:100536662]
51. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - - - 1.000 - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
52. si:dkey-34e4.1 ENSDARG00000022085 5 1 - - - - 1.000 - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
53. mir430c-2 2 1 - - - - 1.000 - - - - microRNA 430c-2
54. CABZ01076758.1 ENSDARG00000100810 3 1 - - - - 1.000 - - - -
55. BX000477.1 BX000477.1 1 1 - - - - 1.000 - - - -
56. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 1 - - - - 1.000 - - - -
57. dgcr8 ENSDARG00000035564, ENSDARG00000113898 39 1 - - - - 1.000 - - - - DGCR8 microprocessor complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-3421]
58. si:ch211-272h9.5 ENSDARG00000092167 8 1 - - - - 1.000 - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
59. CLCN2 CLCN2 8 1 - - - - 1.000 - - - -
60. greb1l_1 ENSDARG00000039196 8 1 - - - - 1.000 - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
61. zgc:153704 ENSDARG00000045979 11 1 - - - - 1.000 - - - - zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
62. or137-1 ENSDARG00000105789 2 1 - - - - 1.000 - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
63. suv39h1a ENSDARG00000026799 18 1 - - - - 1.000 - - - - suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111]
64. illr3 ENSDARG00000018327 5 1 - - - - 1.000 - - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
65. MUC5B MUC5B 1 1 - - - - 1.000 - - - -
66. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 - - - - 1.000 - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
67. DDO_1 DDO_1 5 1 - - - - 1.000 - - - -
68. omga ENSDARG00000086573 3 1 - - - - 1.000 - - - - oligodendrocyte myelin glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-091204-203]
69. tmprss3a ENSDARG00000053315 5 1 - - - - 1.000 - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
70. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - 1.000 - - - -
71. CUZD1 CUZD1 2 1 - - - 1.000 - - - - -
72. nyx ENSDARG00000061791 2 1 - - - 1.000 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
73. gucy2f ENSDARG00000025504 6 1 - - - 1.000 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
74. CABZ01069745.1 CABZ01069745.1 0 1 - - - - 1.000 - - - -
75. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - 1.000 - - - - -
76. PLCH2 PLCH2 3 1 - - - 1.000 - - - - -
77. mamdc2a ENSDARG00000098345 21 1 - - - - 1.000 - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
78. si:ch211-210m1.3 si:ch211-210m1.3 2 1 - - - 1.000 - - - - -
79. acsl6 0 1 - - - - 1.000 - - - - acyl-CoA synthetase long-chain family member 6
80. BX088525.2 ENSDARG00000117222 11 1 - - - - 1.000 - - - -
81. KBTBD11 ENSDARG00000104958 8 1 - - - - 1.000 - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
82. pcdh15b ENSDARG00000008127 2 1 - - - - 1.000 - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
83. SLC22A23_2 SLC22A23_2 0 1 - - - - 1.000 - - - -
84. slc5a5 ENSDARG00000005392 6 1 - - - 1.000 - - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
85. rfc4 ENSDARG00000042458 2 1 - - - 1.000 - - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
86. tacr3a ENSDARG00000075112 1 1 - - - 1.000 - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
87. si:ch211-224l10.5 si:ch211-224l10.5 1 1 - - - 1.000 - - - - -
88. ENDOD1_4 ENDOD1_4 2 1 - - - - 1.000 - - - -
89. zgc:113343 ENSDARG00000103196 2 1 - - - - 1.000 - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
90. pnocb ENSDARG00000024189 18 1 - - - - 1.000 - - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
91. zgc:173603 zgc:173603 2 1 - - - - 1.000 - - - -
92. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 - - - - 1.000 - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
93. U1_34 U1_34 0 1 - - - - 1.000 - - - -
94. CR392006.2 CR392006.2 0 1 - - - - 1.000 - - - -
95. agbl5 ENSDARG00000045900 2 1 - - - - 1.000 - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
96. irf1b ENSDARG00000043249 30 1 - - - - 1.000 - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
97. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - 1.000 - - - -
98. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - 1.000 - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
99. or102-3 ENSDARG00000074966 0 1 - - - - 1.000 - - - - odorant receptor, family C, subfamily 102, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-3]
100. si:dkey-4m13.3 6 1 - - - 1.000 - - - - - si:dkey-4m13.3

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA