Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-128b10.5

Gene Name Gene ID Reads Annotation
si:ch211-128b10.5 si:ch211-128b10.5 3










Genes with expression patterns similar to si:ch211-128b10.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-128b10.5 si:ch211-128b10.5 3 3 - - - 1.000 1.000 - - - 1.000
2. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1.944 - - - 1.000 - - - - 0.944 aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
3. si:dkey-9i5.4 si:dkey-9i5.4 14 1.847 - - - 0.847 1.000 - - - -
4. si:ch73-211l2.3 ENSDARG00000075932 4 1.749 - - - - 1.000 - - - 0.749 si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
5. si:ch211-128b10.4 si:ch211-128b10.4 3 1.702 - - - 0.702 1.000 - - - -
6. Metazoa_SRP_30 Metazoa_SRP_30 10 1 - - - - 1.000 - - - -
7. pcdh15b ENSDARG00000008127 2 1 - - - - 1.000 - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
8. ddx46 ENSDARG00000099458 24 1 - - - - 1.000 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
9. rpz3 ENSDARG00000069728 11 1 - - - - 1.000 - - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
10. si:ch73-138e16.4 ENSDARG00000102363 0 1 - - - - 1.000 - - - - si:ch73-138e16.4 [Source:ZFIN;Acc:ZDB-GENE-070705-203]
11. irbp 2 1 - - - 1.000 - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
12. zgc:103519 zgc:103519 3 1 - - - - 1.000 - - - -
13. nitr7b ENSDARG00000067977 0 1 - - - - 1.000 - - - - novel immune-type receptor 7b [Source:ZFIN;Acc:ZDB-GENE-041001-8]
14. rfc4 ENSDARG00000042458 2 1 - - - 1.000 - - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
15. si:dkey-13k17.1 si:dkey-13k17.1 2 1 - - - - 1.000 - - - -
16. mamdc2a ENSDARG00000098345 21 1 - - - - 1.000 - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
17. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - - - 1.000 - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
18. TMEM150B TMEM150B 1 1 - - - - 1.000 - - - -
19. si:ch211-278f21.5 si:ch211-278f21.5 1 1 - - - 1.000 - - - - -
20. si:ch211-79g12.1 ENSDARG00000116692 2 1 - - - - 1.000 - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
21. DENND1C DENND1C 1 1 - - - - 1.000 - - - -
22. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - 1.000 - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
23. agbl5 ENSDARG00000045900 2 1 - - - - 1.000 - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
24. si:ch211-15p9.2 ENSDARG00000062241 1 1 - - - - 1.000 - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
25. si:dkey-51d8.2 si:dkey-51d8.2 0 1 - - - - 1.000 - - - -
26. GRXCR2 0 1 - - - - 1.000 - - - - glutaredoxin and cysteine rich domain containing 2
27. si:ch211-207l22.1 si:ch211-207l22.1 1 1 - - - - 1.000 - - - -
28. AL935141.5 AL935141.5 24 1 - - - - 1.000 - - - -
29. si:dkey-220o5.5 ENSDARG00000099211 0 1 - - - - 1.000 - - - - si:dkey-220o5.5 [Source:ZFIN;Acc:ZDB-GENE-081104-376]
30. opn1sw1 ENSDARG00000045677 1 1 - - - - 1.000 - - - - opsin 1 (cone pigments), short-wave-sensitive 1 [Source:ZFIN;Acc:ZDB-GENE-991109-25]
31. greb1l_1 ENSDARG00000039196 8 1 - - - - 1.000 - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
32. ENSDARG00000091583 ENSDARG00000091583 0 1 - - - - 1.000 - - - -
33. USP2 USP2 157 1 - - - - 1.000 - - - -
34. gucy2f ENSDARG00000025504 6 1 - - - 1.000 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
35. gatsl3 7 1 - - - - 1.000 - - - - GATS protein-like 3
36. CR753866.2 CR753866.2 6 1 - - - - 1.000 - - - -
37. CABZ01069745.1 CABZ01069745.1 0 1 - - - - 1.000 - - - -
38. CABZ01031627.2 CABZ01031627.2 1 1 - - - - 1.000 - - - -
39. PLB1 PLB1 20 1 - - - - 1.000 - - - -
40. slc5a5 ENSDARG00000005392 6 1 - - - 1.000 - - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
41. CLCN2 CLCN2 8 1 - - - - 1.000 - - - -
42. LRCH4 ENSDARG00000068258 22 1 - - - - 1.000 - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
43. si:dkey-4m13.3 6 1 - - - 1.000 - - - - - si:dkey-4m13.3
44. CR318624.1 ENSDARG00000094618 5 1 - - - 1.000 - - - - -
45. zgc:173603 zgc:173603 2 1 - - - - 1.000 - - - -
46. or115-8 ENSDARG00000092406 1 1 - - - - 1.000 - - - - odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
47. suv39h1a ENSDARG00000026799 18 1 - - - - 1.000 - - - - suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111]
48. zgc:153704 ENSDARG00000045979 11 1 - - - - 1.000 - - - - zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
49. calhm3 ENSDARG00000079602 4 1 - - - - 1.000 - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
50. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 - - - - 1.000 - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
51. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - 1.000 - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
52. or102-3 ENSDARG00000074966 0 1 - - - - 1.000 - - - - odorant receptor, family C, subfamily 102, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-3]
53. si:dkey-254e13.12 si:dkey-254e13.12 1 1 - - - - 1.000 - - - -
54. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - 1.000 - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
55. pnocb ENSDARG00000024189 18 1 - - - - 1.000 - - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
56. VWA5A_1 VWA5A_1 6 1 - - - - 1.000 - - - -
57. SEMA4D ENSDARG00000067801 5 1 - - - - 1.000 - - - - semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]
58. CABZ01072853.1 CABZ01072853.1 35 1 - - - - 1.000 - - - -
59. si:dkey-29p23.2 ENSDARG00000113192 2 1 - - - - 1.000 - - - - si:dkey-29p23.2 [Source:ZFIN;Acc:ZDB-GENE-110914-51]
60. cdx1a ENSDARG00000114554 28 1 - - - 1.000 - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
61. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - 1.000 - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
62. BX088525.2 ENSDARG00000117222 11 1 - - - - 1.000 - - - -
63. DDO_1 DDO_1 5 1 - - - - 1.000 - - - -
64. CU367845.1_1 CU367845.1_1 43 1 - - - 1.000 - - - - -
65. CR392006.2 CR392006.2 0 1 - - - - 1.000 - - - -
66. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 - - - - 1.000 - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
67. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - 1.000 - - - -
68. CLTCL1_2 CLTCL1_2 1 1 - - - - 1.000 - - - -
69. glsa ENSDARG00000062812 1 1 - - - - 1.000 - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
70. tmprss3a ENSDARG00000053315 5 1 - - - - 1.000 - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
71. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - 1.000 - - - - -
72. or137-1 ENSDARG00000105789 2 1 - - - - 1.000 - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
73. dgcr8 ENSDARG00000035564, ENSDARG00000113898 39 1 - - - - 1.000 - - - - DGCR8 microprocessor complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-3421]
74. ENDOD1_4 ENDOD1_4 2 1 - - - - 1.000 - - - -
75. ADAD1 ENSDARG00000089181 9 1 - - - - 1.000 - - - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
76. ZNF70_13 ZNF70_13 1 1 - - - - 1.000 - - - -
77. PEG3_8 PEG3_8 1 1 - - - - 1.000 - - - -
78. si:dkey-34e4.1 ENSDARG00000022085 5 1 - - - - 1.000 - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
79. nyx ENSDARG00000061791 2 1 - - - 1.000 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
80. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 1 - - - - 1.000 - - - -
81. CRYGM4 ENSDARG00000008219 1 1 - - - 1.000 - - - - - crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
82. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - 1.000 - - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
83. si:ch211-272h9.5 ENSDARG00000092167 8 1 - - - - 1.000 - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
84. ROCK2_2 ROCK2_2 0 1 - - - - 1.000 - - - -
85. mir430c-2 2 1 - - - - 1.000 - - - - microRNA 430c-2
86. espnla ENSDARG00000078211 8 1 - - - - 1.000 - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
87. KBTBD11 ENSDARG00000104958 8 1 - - - - 1.000 - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
88. TMCC1_1 TMCC1_1 1 1 - - - 1.000 - - - - -
89. kcnf1b ENSDARG00000027285 2 1 - - - 1.000 - - - - - potassium voltage-gated channel, subfamily F, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-39]
90. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 - - - 1.000 - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
91. SLC22A23_2 SLC22A23_2 0 1 - - - - 1.000 - - - -
92. GSTK1_2 GSTK1_2 8 1 - - - - 1.000 - - - -
93. zgc:113343 ENSDARG00000103196 2 1 - - - - 1.000 - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
94. si:ch211-210m1.3 si:ch211-210m1.3 2 1 - - - 1.000 - - - - -
95. ms4a17a.1 ENSDARG00000043798 7 1 - - - 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
96. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - - - - 1.000 - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
97. tmem144b ENSDARG00000036247 2 1 - - - - 1.000 - - - - transmembrane protein 144b [Source:ZFIN;Acc:ZDB-GENE-041010-58]
98. MEIS2 MEIS2 3 1 - - - - 1.000 - - - -
99. BX901974.1 ENSDARG00000067592 2 1 - - - 1.000 - - - - -
100. irf1b ENSDARG00000043249 30 1 - - - - 1.000 - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA