Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-128b10.4

Gene Name Gene ID Reads Annotation
si:ch211-128b10.4 si:ch211-128b10.4 3










Genes with expression patterns similar to si:ch211-128b10.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-128b10.4 si:ch211-128b10.4 3 5 - - 1.000 1.000 1.000 1.000 - - 1.000
2. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 2 - - - - - 1.000 - - 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
3. glsa ENSDARG00000062812 1 2 - - - - 1.000 - - - 1.000 glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
4. CABZ01071407.1 CABZ01071407.1 6 2 - - - - 1.000 - - - 1.000
5. KBTBD11 ENSDARG00000104958 8 1.926 - - 0.926 - 1.000 - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
6. si:ch211-93g21.1 ENSDARG00000093602 5 1.828 - - - - 1.000 - - - 0.828 si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
7. BX546499.2 ENSDARG00000093947 26 1.822 - - - - - 0.954 - - 0.868
8. 5S_rRNA_15 5S_rRNA_15 9 1.806 - - - - 0.806 1.000 - - -
9. FBLN7 ENSDARG00000089519 4 1.806 - - 0.806 - - 1.000 - - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
10. trpa1b ENSDARG00000031875 39 1.784 - - 0.784 - - 1.000 - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
11. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.781 - - 1.000 - - 0.781 - - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
12. ENSDARG00000087581 ENSDARG00000087581 2 1.753 - - - - 0.753 - - - 1.000
13. sla2 ENSDARG00000020788, ENSDARG00000115055 13 1.737 - - - - 0.971 - - - 0.766 Src-like-adaptor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-98]
14. tbkbp1 ENSDARG00000061473 24 1.705 - - 0.836 - - 0.869 - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
15. si:ch211-128b10.5 si:ch211-128b10.5 3 1.702 - - - 0.702 1.000 - - - -
16. si:ch211-81g2.1 si:ch211-81g2.1 5 1.553 - - 0.851 0.702 - - - - -
17. avpr2aa ENSDARG00000007436 43 1.459 - - - - - 0.724 - - 0.735 arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
18. si:ch211-180p9.2 si:ch211-180p9.2 1 1 - - - - - - - - 1.000
19. ppp4r4 ENSDARG00000010407 1 1 - - - - - 1.000 - - - protein phosphatase 4, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041001-164]
20. ACSL6 12 1 - - - - - 1.000 - - - acyl-CoA synthetase long-chain family member 6
21. chrm2a ENSDARG00000098612 5 1 - - - - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
22. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
23. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - - - - - - - - 1.000
24. CABZ01040931.1 ENSDARG00000099474 0 1 - - - - 1.000 - - - -
25. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - 1.000 - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
26. cecr1b 2 1 - - - - - 1.000 - - - cat eye syndrome chromosome region, candidate 1b
27. radil ENSDARG00000079779 14 1 - - - - - - - - 1.000 Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
28. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
29. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
30. CR381630.1 CR381630.1 23 1 - - - - - 1.000 - - -
31. si:dkey-51d8.2 si:dkey-51d8.2 0 1 - - - - 1.000 - - - -
32. CABZ01072853.1 CABZ01072853.1 35 1 - - - - 1.000 - - - -
33. GTF3A GTF3A 6 1 - - - - - - - - 1.000
34. wnt10b ENSDARG00000040925 162 1 - - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
35. AL935141.5 AL935141.5 24 1 - - - - 1.000 - - - -
36. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
37. desmb ENSDARG00000005221, ENSDARG00000110245 3 1 - - - - - - - - 1.000 desmin b [Source:ZFIN;Acc:ZDB-GENE-061027-102]
38. skor1a ENSDARG00000069030 19 1 - - - - - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
39. GRXCR2 0 1 - - - - 1.000 - - - - glutaredoxin and cysteine rich domain containing 2
40. CT583709.2 CT583709.2 55 1 - - 1.000 - - - - - -
41. BX005052.1 BX005052.1 16 1 - - - - - 1.000 - - -
42. si:ch1073-15f19.2 ENSDARG00000095640 4 1 - - - - 1.000 - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
43. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
44. ZNF337_16 ZNF337_16 22 1 - - - - - 1.000 - - -
45. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
46. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - - - - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
47. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - - 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
48. GSTK1_2 GSTK1_2 8 1 - - - - 1.000 - - - -
49. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1 - - - - - 1.000 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
50. fam189a1 ENSDARG00000053380 11 1 - - - - 1.000 - - - - family with sequence similarity 189, member A1 [Source:ZFIN;Acc:ZDB-GENE-040718-129]
51. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
52. pygo1 ENSDARG00000098687 4 1 - - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
53. si:ch211-245l1.1 si:ch211-245l1.1 1 1 - - - - - 1.000 - - -
54. GAS2 18 1 - - - - - 1.000 - - - growth arrest specific 2, transcript variant X1
55. or137-1 ENSDARG00000105789 2 1 - - - - 1.000 - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
56. rhbdd3 ENSDARG00000079816 2 1 - - - - - 1.000 - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
57. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
58. zgc:103519 zgc:103519 3 1 - - - - 1.000 - - - -
59. si:ch211-214c7.4 ENSDARG00000069595 56 1 - - - - - 1.000 - - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
60. shank3a ENSDARG00000063332 5 1 - - - - - 1.000 - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
61. ENDOD1_4 ENDOD1_4 2 1 - - - - 1.000 - - - -
62. FAM13C FAM13C 1 1 - - - - - - - - 1.000
63. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - - 1.000
64. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
65. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
66. BRINP3 BRINP3 11 1 - - - - - 1.000 - - -
67. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
68. si:ch211-59g22.2 si:ch211-59g22.2 7 1 - - - - - 1.000 - - -
69. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
70. calhm3 ENSDARG00000079602 4 1 - - - - 1.000 - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
71. SYT17 ENSDARG00000060741 1 1 - - - - - 1.000 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
72. U1_31 U1_31 0 1 - - - - 1.000 - - - -
73. si:dkey-28d5.12 1 1 - - 1.000 - - - - - - si:dkey-28d5.12
74. SEMA4D ENSDARG00000067801 5 1 - - - - 1.000 - - - - semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]
75. si:ch73-211l2.3 ENSDARG00000075932 4 1 - - - - 1.000 - - - - si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
76. CR678040.1 CR678040.1 117 1 - - - - - 1.000 - - -
77. zgc:165582 ENSDARG00000074362 198 1 - - - - - 1.000 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
78. npy4r ENSDARG00000043341, ENSDARG00000113787 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
79. greb1l_1 ENSDARG00000039196 8 1 - - - - 1.000 - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
80. ppil6 ENSDARG00000042157 45 1 - - - 1.000 - - - - - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
81. si:dkey-29p23.2 ENSDARG00000113192 2 1 - - - - 1.000 - - - - si:dkey-29p23.2 [Source:ZFIN;Acc:ZDB-GENE-110914-51]
82. PLB1 PLB1 20 1 - - - - 1.000 - - - -
83. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 - - - - 1.000 - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
84. CLCN2 CLCN2 8 1 - - - - 1.000 - - - -
85. mamdc2a ENSDARG00000098345 21 1 - - - - 1.000 - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
86. si:ch211-15p9.2 ENSDARG00000062241 1 1 - - - - 1.000 - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
87. PRKCA_1 ENSDARG00000099841 12 1 - - - - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
88. BX469930.1 ENSDARG00000092358 3 1 - - - - 1.000 - - - -
89. porcnl ENSDARG00000052455 29 1 - - - - - 1.000 - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
90. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - - - 1.000 - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
91. U1_30 U1_30 1 1 - - 1.000 - - - - - -
92. CABZ01057951.1 CABZ01057951.1 10 1 - - - - - - - - 1.000
93. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
94. LAMA3 ENSDARG00000071462 5 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
95. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
96. mir430c-2 2 1 - - - - 1.000 - - - - microRNA 430c-2
97. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
98. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - - - - - - - 1.000 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
99. zgc:173603 zgc:173603 2 1 - - - - 1.000 - - - -
100. si:dkey-33k1.2 si:dkey-33k1.2 1 1 - - - - - - - - 1.000

There are 616 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA