Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-125e6.8

Gene Name Gene ID Reads Annotation
si:ch211-125e6.8 ENSDARG00000094518 538 si:ch211-125e6.8 [Source:ZFIN;Acc:ZDB-GENE-070912-42]










Genes with expression patterns similar to si:ch211-125e6.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-125e6.8 ENSDARG00000094518 538 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-125e6.8 [Source:ZFIN;Acc:ZDB-GENE-070912-42]
2. klhl15 ENSDARG00000001930 793 1.817 - - 0.981 - - 0.836 - - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
3. pycr1 pycr1 1258 1.784 - - 0.983 - - - 0.801 - -
4. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.754 - - 0.988 - - - 0.766 - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
5. PGBD4_3 PGBD4_3 861 1.744 - - 0.982 - - - 0.762 - -
6. sema3fa ENSDARG00000011163 759 1.693 - - 0.985 - - - 0.708 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
7. hira ENSDARG00000013434 2204 1.635 - - 0.919 - - 0.716 - - - histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
8. si:dkey-202b22.6 ENSDARG00000045552 190 1.573 0.784 - - - 0.789 - - - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
9. hsd17b7 ENSDARG00000088140 185 1.548 0.774 - - - - - 0.774 - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
10. rad17 ENSDARG00000018918 332 1.528 0.805 0.723 - - - - - - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
11. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 1.473 - 0.744 - - 0.729 - - - - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
12. mst1ra ENSDARG00000060235 78 1.463 0.705 - - - 0.758 - - - - macrophage stimulating 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-071218-2]
13. ssb ENSDARG00000029252 3394 1.436 - 0.729 - - - - 0.707 - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
14. dip2c dip2c 248 1.432 - 0.716 - - - - 0.716 - -
15. NAIF1_1 NAIF1_1 1336 0.988 - - 0.988 - - - - - -
16. inip ENSDARG00000028523 1925 0.988 - - 0.988 - - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
17. paxip1 ENSDARG00000005606 1417 0.986 - - 0.986 - - - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
18. dyrk1ab ENSDARG00000023814 1769 0.986 - - 0.986 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
19. gins4 ENSDARG00000016044 671 0.985 - - 0.985 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
20. PATZ1 ENSDARG00000076584 1116 0.985 - - 0.985 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
21. fignl1 ENSDARG00000016427 636 0.985 - - 0.985 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
22. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.985 - - 0.985 - - - - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
23. pank1b ENSDARG00000010098 3202 0.985 - - 0.985 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
24. si:dkey-176f19.6 si:dkey-176f19.6 373 0.984 - - 0.984 - - - - - -
25. lrp12 ENSDARG00000098845 999 0.984 - - 0.984 - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
26. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.984 - - 0.984 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
27. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.984 - - 0.984 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
28. f2rl1.2 ENSDARG00000077540 822 0.984 - - 0.984 - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
29. pkib ENSDARG00000053110 527 0.984 - - 0.984 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
30. setdb1a ENSDARG00000041243 1952 0.984 - - 0.984 - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
31. wdhd1 ENSDARG00000015998 775 0.984 - - 0.984 - - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
32. cln6a ENSDARG00000077584 1090 0.984 - - 0.984 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
33. phf12a ENSDARG00000074303 1025 0.984 - - 0.984 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
34. clybl ENSDARG00000029729 690 0.983 - - 0.983 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
35. CU467832.1 CU467832.1 635 0.983 - - 0.983 - - - - - -
36. smg5 ENSDARG00000041481 1286 0.983 - - 0.983 - - - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
37. lgi1a ENSDARG00000020493 1218 0.983 - - 0.983 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
38. lipt1 ENSDARG00000025233 385 0.983 - - 0.983 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
39. pou6f1 ENSDARG00000011570 1501 0.983 - - 0.983 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
40. dtl ENSDARG00000023002 572 0.983 - - 0.983 - - - - - - denticleless E3 ubiquitin protein ligase homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020419-34]
41. crb2a ENSDARG00000060106 1307 0.983 - - 0.983 - - - - - - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
42. pld1b ENSDARG00000057125 325 0.983 - - 0.983 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
43. MED8 ENSDARG00000114425 459 0.983 - - 0.983 - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
44. zgc:113227 ENSDARG00000058874 266 0.983 - - 0.983 - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
45. gata1b ENSDARG00000059130 151 0.983 - - 0.983 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
46. U1_25 U1_25 283 0.983 - - 0.983 - - - - - -
47. mfsd4a mfsd4a 179 0.983 - - 0.983 - - - - - -
48. CT573103.1 ENSDARG00000097550 950 0.983 - - 0.983 - - - - - -
49. zgc:171673 ENSDARG00000102473 256 0.983 - - 0.983 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
50. vipas39 ENSDARG00000103690 280 0.982 - - 0.982 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
51. hemk1 ENSDARG00000078894 397 0.982 - - 0.982 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
52. mettl3 ENSDARG00000012827 728 0.982 - - 0.982 - - - - - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
53. usp8 ENSDARG00000063719 643 0.982 - - 0.982 - - - - - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
54. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 0.982 - - 0.982 - - - - - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
55. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 0.982 - - 0.982 - - - - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
56. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.982 - - 0.982 - - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
57. CLIP4 ENSDARG00000096961 363 0.982 - - 0.982 - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
58. nrg1 ENSDARG00000104314 1081 0.982 - - 0.982 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
59. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.981 - - 0.981 - - - - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
60. qki2 ENSDARG00000010018 2230 0.981 - - 0.981 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
61. SNX19 SNX19 350 0.981 - - 0.981 - - - - - -
62. gbas gbas 735 0.981 - - 0.981 - - - - - -
63. phc2b_1 ENSDARG00000013224 1316 0.981 - - 0.981 - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
64. DNAJC16 ENSDARG00000059699 507 0.981 - - 0.981 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
65. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.981 - - 0.981 - - - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
66. fut8 fut8 652 0.981 - - 0.981 - - - - - -
67. PPP1R16B ENSDARG00000079860 390 0.981 - - 0.981 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
68. smad4 smad4 2519 0.981 - - 0.981 - - - - - -
69. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.981 - - 0.981 - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
70. pnn ENSDARG00000015851 1269 0.98 - - 0.980 - - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
71. RAB39B RAB39B 482 0.98 - - 0.980 - - - - - -
72. mrpl22 ENSDARG00000109961 1374 0.98 - - 0.980 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
73. arid1b ENSDARG00000092503 1376 0.98 - - 0.980 - - - - - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
74. kansl3 ENSDARG00000029556 2487 0.98 - - 0.980 - - - - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
75. selt1b 1396 0.98 - - 0.980 - - - - - - selenoprotein T, 1b
76. tmem248 ENSDARG00000018825 1560 0.979 - - 0.979 - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
77. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 0.979 - - 0.979 - - - - - - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
78. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.979 - - 0.979 - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
79. fam50a ENSDARG00000024895 3020 0.979 - - 0.979 - - - - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
80. rhogc ENSDARG00000028401 2671 0.979 - - 0.979 - - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
81. si:ch211-114l13.11 si:ch211-114l13.11 4727 0.979 - - 0.979 - - - - - -
82. gga3 ENSDARG00000103667 675 0.978 - - 0.978 - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
83. LPHN2 LPHN2 1971 0.978 - - 0.978 - - - - - -
84. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.978 - - 0.978 - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
85. olig2 ENSDARG00000040946 1405 0.978 - - 0.978 - - - - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
86. znf410 ENSDARG00000008218 1807 0.978 - - 0.978 - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
87. slain2 ENSDARG00000032114 798 0.977 - - 0.977 - - - - - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
88. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 0.977 - - 0.977 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
89. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.977 - - 0.977 - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
90. wu:fc26g07 wu:fc26g07 1165 0.977 - - 0.977 - - - - - -
91. actr10 ENSDARG00000038432 1598 0.977 - - 0.977 - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
92. pnkp ENSDARG00000100455, ENSDARG00000114060 1475 0.977 - - 0.977 - - - - - - polynucleotide kinase 3'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-061013-433]
93. pdzrn3b ENSDARG00000073869 1566 0.977 - - 0.977 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
94. polb ENSDARG00000003749 2049 0.977 - - 0.977 - - - - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
95. nktr ENSDARG00000059097 1998 0.977 - - 0.977 - - - - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
96. nploc4 ENSDARG00000100487 1262 0.976 - - 0.976 - - - - - - NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
97. rela ENSDARG00000098696 889 0.976 - - 0.976 - - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
98. rnf113a ENSDARG00000037930 849 0.976 - - 0.976 - - - - - - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
99. vrk1 ENSDARG00000018006 1759 0.976 - - 0.976 - - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
100. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 0.975 - - 0.975 - - - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]

There are 697 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA