Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-125e6.5

Gene Name Gene ID Reads Annotation
si:ch211-125e6.5 ENSDARG00000069381 2 si:ch211-125e6.5 [Source:ZFIN;Acc:ZDB-GENE-070912-39]










Genes with expression patterns similar to si:ch211-125e6.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-125e6.5 ENSDARG00000069381 2 2 - - 1.000 - - - - 1.000 - si:ch211-125e6.5 [Source:ZFIN;Acc:ZDB-GENE-070912-39]
2. pm20d1.1 ENSDARG00000037551 11 1.71 - - 0.710 - - - - 1.000 - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
3. BX004994.2 BX004994.2 17 1.585 - - 0.755 - - - - 0.830 -
4. SNORA57 SNORA57 148 1 - - - - - - - 1.000 -
5. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - - - - - - - 1.000 -
6. dapk3 ENSDARG00000074447 12 1 - - - - - - - 1.000 - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
7. dre-mir-2189 ENSDARG00000098723 9 1 - - - - - - - 1.000 - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
8. LRRC38 LRRC38 5 1 - - - - - - - 1.000 -
9. zar1l ENSDARG00000055973, ENSDARG00000116232 2 1 - - - - - - - 1.000 - zygote arrest 1-like [Source:ZFIN;Acc:ZDB-GENE-060810-119]
10. si:dkey-14a7.5 si:dkey-14a7.5 1 1 - - - - - - - 1.000 -
11. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - - - - 1.000 - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
12. si:ch73-335d12.2 ENSDARG00000025505 1 1 - - - - - - - 1.000 - si:ch73-335d12.2 [Source:ZFIN;Acc:ZDB-GENE-060503-423]
13. BX005082.1 ENSDARG00000098558 2 1 - - - - - - - 1.000 -
14. CABZ01072254.1 ENSDARG00000076111 4 1 - - - - - - - 1.000 - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
15. CR628323.3 ENSDARG00000106158 1 1 - - - - - - - 1.000 - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
16. RBBP6_6 RBBP6_6 1 1 - - - - - - - 1.000 -
17. efemp2b_1 ENSDARG00000020811 77 1 - - - - - - - 1.000 - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
18. PRKD2_1 PRKD2_1 1 1 - - - - - - - 1.000 -
19. si:ch211-215c18.3 ENSDARG00000095308 11 1 - - - - - - - 1.000 - si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]
20. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - - - - - - 1.000 -
21. GPR97_1 GPR97_1 2 1 - - - - - - - 1.000 -
22. VSTM5 4 1 - - - - - - - 1.000 - V-set and transmembrane domain containing 5
23. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - - - - - - - 1.000 - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
24. CNGA1 3 1 - - - - - - - 1.000 - cyclic nucleotide gated channel alpha 1
25. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - - 1.000 -
26. PAMR1 ENSDARG00000093480 40 0.992 - - - - - - - 0.992 - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
27. GAS2_1 GAS2_1 16 0.983 - - - - - - - 0.983 -
28. CABZ01064968.2 CABZ01064968.2 20 0.982 - - - - - - - 0.982 -
29. col5a2b ENSDARG00000024847 17 0.966 - - 0.966 - - - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
30. zgc:113397 zgc:113397 60 0.965 - - - - - - - 0.965 -
31. C20H20orf26 C20H20orf26 4 0.952 - - - - - - - 0.952 -
32. si:ch73-223d24.4 si:ch73-223d24.4 5 0.943 - - - - - - - 0.943 -
33. si:dkey-79c1.1 ENSDARG00000093179 11 0.943 - - - - - - - 0.943 - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
34. MFAP4_3 MFAP4_3 7 0.937 - - - - - - - 0.937 -
35. matn1 ENSDARG00000030215 11 0.936 - - - - - - - 0.936 - matrilin 1 [Source:ZFIN;Acc:ZDB-GENE-050307-3]
36. si:dkey-266f7.9 ENSDARG00000075958 1 0.935 - - - - - - - 0.935 - si:dkey-266f7.9 [Source:ZFIN;Acc:ZDB-GENE-070705-440]
37. slc24a1 ENSDARG00000041431 33 0.935 - - - - - - - 0.935 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
38. mmp13b ENSDARG00000100794 38 0.935 - - - - - - - 0.935 - matrix metallopeptidase 13b [Source:ZFIN;Acc:ZDB-GENE-030131-6152]
39. irg1 22 0.932 - - 0.932 - - - - - - immunoresponsive 1 homolog (mouse)
40. C9HXorf36 C9HXorf36 44 0.93 - - 0.930 - - - - - -
41. ccdc169 ENSDARG00000089570 101 0.927 - - - - - - - 0.927 - coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
42. PRKD1 ENSDARG00000075949 15 0.911 - - - - - - - 0.911 - protein kinase D1 [Source:ZFIN;Acc:ZDB-GENE-080131-1]
43. zgc:112294 ENSDARG00000010602 23 0.905 - - - - - - - 0.905 - zgc:112294 [Source:ZFIN;Acc:ZDB-GENE-050522-418]
44. si:dkeyp-20e4.9 si:dkeyp-20e4.9 3 0.904 - - - - - - - 0.904 -
45. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 0.904 - - - - - - - 0.904 - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
46. palmda ENSDARG00000001913 26 0.902 - - 0.902 - - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
47. BX323449.2 BX323449.2 50 0.899 - - - - - - - 0.899 -
48. zgc:158706 zgc:158706 15 0.893 - - - - - - - 0.893 -
49. IQCK ENSDARG00000076831, ENSDARG00000112508 6 0.887 - - - - - - - 0.887 - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
50. si:dkey-46m10.2 si:dkey-46m10.2 1 0.887 - - - - - - - 0.887 -
51. HTR1E 103 0.885 - - - - - - - 0.885 - 5-hydroxytryptamine receptor 1E
52. cacna1aa ENSDARG00000037905 4 0.882 - - - - - - - 0.882 - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
53. CU672227.1 ENSDARG00000105807 15 0.882 - - - - - - - 0.882 -
54. ifnphi3 ENSDARG00000070676 7 0.882 - - - - - - - 0.882 - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
55. ARSJ ENSDARG00000077590 684 0.881 - - - - - - - 0.881 - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
56. HDAC7 HDAC7 12 0.878 - - - - - - - 0.878 -
57. LPXN ENSDARG00000079315 12 0.861 - - - - - - - 0.861 - leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
58. FANCA ENSDARG00000098241 39 0.859 - - - - - - - 0.859 - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
59. C10H5orf63 C10H5orf63 17 0.858 - - - - - - - 0.858 -
60. map3k4 ENSDARG00000104835 34 0.839 - - - - - - - 0.839 - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
61. fbxo16 ENSDARG00000033949 35 0.838 - - - - - - - 0.838 - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
62. zdhhc18a ENSDARG00000069807 8 0.835 - - - - - - - 0.835 - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
63. GCNT7 ENSDARG00000040608 91 0.835 - - 0.835 - - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
64. CABZ01075275.1 CABZ01075275.1 124 0.826 - - 0.826 - - - - - -
65. dctn1a ENSDARG00000019743 45 0.824 - - - - - - - 0.824 - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
66. spag6 ENSDARG00000020158 218 0.824 - - - - - - - 0.824 - sperm associated antigen 6 [Source:ZFIN;Acc:ZDB-GENE-040704-53]
67. batf3 ENSDARG00000042577 34 0.823 - - - - - - - 0.823 - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
68. zte25 zte25 29 0.818 - - - - - - - 0.818 -
69. CABZ01113374.2 CABZ01113374.2 27 0.818 - - - - - - - 0.818 -
70. ANKRD6 ANKRD6 73 0.813 - - - - - - - 0.813 -
71. CCDC176_1 CCDC176_1 126 0.812 - - - - - - - 0.812 -
72. si:dkey-32n7.7 ENSDARG00000063444 4 0.81 - - - - - - - 0.810 - si:dkey-32n7.7 [Source:ZFIN;Acc:ZDB-GENE-121214-179]
73. hdhd2 ENSDARG00000024728 5 0.808 - - - - - - - 0.808 - haloacid dehalogenase-like hydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-37]
74. lrrc34 ENSDARG00000062235 23 0.806 - - - - - - - 0.806 - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
75. CNGB1 CNGB1 40 0.801 - - - - - - - 0.801 -
76. grk7b ENSDARG00000055534 17 0.8 - - - - - - - 0.800 - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
77. dnah1 ENSDARG00000100115 17 0.796 - - - - - - - 0.796 - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
78. PLEKHG3 72 0.796 - - - - - - - 0.796 - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
79. KCTD20 6 0.787 - - - - - - - 0.787 - potassium channel tetramerization domain containing 20, transcript variant X2
80. HIP1R_1 HIP1R_1 129 0.786 - - - - - - - 0.786 -
81. ponzr6 ENSDARG00000036382 16 0.786 - - - - - - - 0.786 - plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
82. AL935046.1 AL935046.1 89 0.784 - - - - - - - 0.784 -
83. rergla ENSDARG00000019396 42 0.776 - - - - - - - 0.776 - RERG/RAS-like a [Source:ZFIN;Acc:ZDB-GENE-040718-198]
84. CU633740.1 CU633740.1 8 0.768 - - - - - - - 0.768 -
85. ak7b ENSDARG00000017023 25 0.767 - - - - - - - 0.767 - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
86. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 0.767 - - - - - - - 0.767 - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
87. CCDC83 ENSDARG00000077179 29 0.766 - - - - - - - 0.766 - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
88. ENSDARG00000051828 ENSDARG00000051828 47 0.765 - - - - - - - 0.765 -
89. gucy2f ENSDARG00000025504 6 0.764 - - - - - - - 0.764 - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
90. col4a3 ENSDARG00000003395 499 0.763 - - - - - - - 0.763 - collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
91. CR392330.2 ENSDARG00000093391 62 0.762 - - - - - - - 0.762 -
92. pih1d2 ENSDARG00000014849 389 0.758 - - - - - - - 0.758 - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
93. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 0.757 - - 0.757 - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
94. si:dkey-28d5.12 1 0.755 - - 0.755 - - - - - - si:dkey-28d5.12
95. vip ENSDARG00000078247 10 0.755 - - 0.755 - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
96. U1_30 U1_30 1 0.755 - - 0.755 - - - - - -
97. trim35-30 ENSDARG00000042396, ENSDARG00000114099 2 0.755 - - 0.755 - - - - - - tripartite motif containing 35-30 [Source:ZFIN;Acc:ZDB-GENE-060503-557]
98. mfsd7 2 0.755 - - 0.755 - - - - - - major facilitator superfamily domain containing 7
99. CT583709.2 CT583709.2 55 0.755 - - 0.755 - - - - - -
100. prkaa2 ENSDARG00000060641 12 0.755 - - 0.755 - - - - - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]

There are 43 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA