Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-125e6.11

Gene Name Gene ID Reads Annotation
si:ch211-125e6.11 ENSDARG00000025783 1 si:ch211-125e6.11 [Source:ZFIN;Acc:ZDB-GENE-070912-35]










Genes with expression patterns similar to si:ch211-125e6.11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MAN1B1 MAN1B1 47 1 - - - - - - 1.000 - -
2. si:ch211-125e6.11 ENSDARG00000025783 1 1 - - - - - - 1.000 - - si:ch211-125e6.11 [Source:ZFIN;Acc:ZDB-GENE-070912-35]
3. lmx1bb ENSDARG00000068365 627 0.924 - - - - - - 0.924 - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
4. si:ch211-13k12.1 si:ch211-13k12.1 25 0.919 - - - - - - 0.919 - -
5. ZBTB40 ENSDARG00000091762 57 0.919 - - - - - - 0.919 - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
6. GAS2 18 0.919 - - - - - - 0.919 - - growth arrest specific 2, transcript variant X1
7. dhrs3a ENSDARG00000044982, ENSDARG00000109521 146 0.91 - - - - - - 0.910 - - dehydrogenase/reductase (SDR family) member 3a [Source:ZFIN;Acc:ZDB-GENE-040801-217]
8. actr5 ENSDARG00000098235 237 0.909 - - - - - - 0.909 - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
9. DHX30 ENSDARG00000077839 78 0.889 - - - - - - 0.889 - - DEAH (Asp-Glu-Ala-His) box helicase 30 [Source:ZFIN;Acc:ZDB-GENE-130530-833]
10. sebox ENSDARG00000042526 2 0.886 - - - - - - 0.886 - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
11. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 0.846 - - - - - - 0.846 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
12. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 0.846 - - - - - - 0.846 - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
13. zgc:113411 ENSDARG00000038133, ENSDARG00000112781 68 0.846 - - - - - - 0.846 - - zgc:113411 [Source:ZFIN;Acc:ZDB-GENE-050417-474]
14. BX119963.1 ENSDARG00000096135 28 0.846 - - - - - - 0.846 - -
15. asb16 ENSDARG00000056468, ENSDARG00000110292 126 0.841 - - - - - - 0.841 - - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
16. zgc:113060 zgc:113060 63 0.836 - - - - - - 0.836 - -
17. STX3 ENSDARG00000051981 23 0.831 - - - - - - 0.831 - - syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438]
18. BX649448.1 ENSDARG00000079441 65 0.81 - - - - - - 0.810 - -
19. rad21l1 ENSDARG00000022493 4 0.8 - - - - - - 0.800 - - RAD21 cohesin complex component like 1 [Source:ZFIN;Acc:ZDB-GENE-061103-505]
20. si:dkey-20d21.12 ENSDARG00000092123 38 0.797 - - - - - - 0.797 - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
21. tmco4 ENSDARG00000078924 330 0.792 - - - - - - 0.792 - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
22. dolpp1 ENSDARG00000036915 114 0.791 - - - - - - 0.791 - - dolichyldiphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-041024-11]
23. si:dkey-93m18.4 ENSDARG00000092967 16 0.787 - - - - - - 0.787 - - si:dkey-93m18.4 [Source:ZFIN;Acc:ZDB-GENE-091204-318]
24. ATP5SL ATP5SL 130 0.784 - - - - - - 0.784 - -
25. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.784 - - - - - - 0.784 - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
26. mapkapk3 ENSDARG00000111612 370 0.78 - - - - - - 0.780 - - mitogen-activated protein kinase-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-061215-124]
27. CABZ01054394.3 CABZ01054394.3 60 0.778 - - - - - - 0.778 - -
28. NRBP2 NRBP2 127 0.774 - - - - - - 0.774 - -
29. dok1a ENSDARG00000078108 9 0.77 - - - - - - 0.770 - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
30. CABZ01059415.2 CABZ01059415.2 195 0.77 - - - - - - 0.770 - -
31. CABZ01073736.1 ENSDARG00000099438 81 0.767 - - - - - - 0.767 - -
32. CABZ01021433.1 ENSDARG00000105696 74 0.762 - - - - - - 0.762 - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
33. si:ch73-7i4.1 ENSDARG00000094554 771 0.758 - - - - - - 0.758 - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
34. si:ch211-271e10.2 ENSDARG00000092667 177 0.758 - - - - - - 0.758 - - si:ch211-271e10.2 [Source:ZFIN;Acc:ZDB-GENE-060526-146]
35. CR848784.2 ENSDARG00000111157 16 0.758 - - - - - - 0.758 - -
36. FP325123.1 ENSDARG00000105359 246 0.758 - - - - - - 0.758 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
37. mylk3 ENSDARG00000076348 19 0.758 - - - - - - 0.758 - - myosin light chain kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3497]
38. AL928852.1 AL928852.1 23 0.758 - - - - - - 0.758 - -
39. BX465203.2 BX465203.2 23 0.758 - - - - - - 0.758 - -
40. si:ch73-341p18.6 si:ch73-341p18.6 1 0.758 - - - - - - 0.758 - -
41. trim35-3_1 ENSDARG00000052255 6 0.758 - - - - - - 0.758 - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
42. BX005421.4 BX005421.4 11 0.758 - - - - - - 0.758 - -
43. si:dkey-15h8.13 si:dkey-15h8.13 3 0.758 - - - - - - 0.758 - -
44. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 0.758 - - - - - - 0.758 - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
45. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 0.758 - - - - - - 0.758 - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
46. si:dkey-204a24.11 ENSDARG00000058685 3 0.758 - - - - - - 0.758 - - si:dkey-204a24.11 [Source:ZFIN;Acc:ZDB-GENE-120215-129]
47. si:ch211-71k24.5 si:ch211-71k24.5 9 0.758 - - - - - - 0.758 - -
48. LARS2 ENSDARG00000075337 181 0.758 - - - - - - 0.758 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
49. map7d1a ENSDARG00000098802 118 0.758 - - - - - - 0.758 - - MAP7 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060503-22]
50. pxmp2 ENSDARG00000003144 50 0.758 - - - - - - 0.758 - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
51. zgc:172139 ENSDARG00000068830 10 0.758 - - - - - - 0.758 - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
52. TRIM35_8 TRIM35_8 43 0.758 - - - - - - 0.758 - -
53. C4H12orf55 C4H12orf55 14 0.758 - - - - - - 0.758 - -
54. mlphb ENSDARG00000062481 14 0.758 - - - - - - 0.758 - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
55. stoml3a ENSDARG00000079914 4 0.758 - - - - - - 0.758 - - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
56. runx2b ENSDARG00000059233 106 0.758 - - - - - - 0.758 - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
57. si:dkeyp-46h3.2 ENSDARG00000092498 23 0.758 - - - - - - 0.758 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
58. htr6 ENSDARG00000016095 9 0.758 - - - - - - 0.758 - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
59. si:ch211-264e16.2 ENSDARG00000094415 4 0.758 - - - - - - 0.758 - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
60. BX322608.1 ENSDARG00000111690 326 0.758 - - - - - - 0.758 - -
61. CT573389.1 CT573389.1 26 0.758 - - - - - - 0.758 - -
62. si:ch73-30l9.1 ENSDARG00000095891 42 0.758 - - - - - - 0.758 - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
63. GSTK1_2 GSTK1_2 8 0.758 - - - - - - 0.758 - -
64. vmhcl 119 0.758 - - - - - - 0.758 - - ventricular myosin heavy chain-like
65. C20H1orf95 C20H1orf95 12 0.758 - - - - - - 0.758 - -
66. cs_1 ENSDARG00000103364 2 0.758 - - - - - - 0.758 - - citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
67. taar19o ENSDARG00000093266, ENSDARG00000116999 1 0.758 - - - - - - 0.758 - - trace amine associated receptor 19o [Source:ZFIN;Acc:ZDB-GENE-060414-13]
68. camk1db ENSDARG00000017446 47 0.758 - - - - - - 0.758 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
69. BX469910.2 ENSDARG00000096127 6 0.758 - - - - - - 0.758 - -
70. irx4b ENSDARG00000036051 54 0.758 - - - - - - 0.758 - - iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
71. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.758 - - - - - - 0.758 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
72. SNORA31 SNORA31 23 0.758 - - - - - - 0.758 - -
73. abcc9 ENSDARG00000015985 20 0.758 - - - - - - 0.758 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
74. FGFBP2 FGFBP2 16 0.758 - - - - - - 0.758 - -
75. si:dkey-31m5.3 ENSDARG00000110121 1 0.758 - - - - - - 0.758 - - si:dkey-31m5.3 [Source:ZFIN;Acc:ZDB-GENE-070912-515]
76. FMN1 ENSDARG00000011975 2 0.758 - - - - - - 0.758 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
77. ppp6r2a ENSDARG00000045540 60 0.758 - - - - - - 0.758 - - protein phosphatase 6, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5428]
78. DEPDC7 19 0.758 - - - - - - 0.758 - - DEP domain containing 7, transcript variant X1
79. ZNF337_16 ZNF337_16 22 0.758 - - - - - - 0.758 - -
80. FP103005.1 ENSDARG00000099852 4 0.758 - - - - - - 0.758 - -
81. map3k12 ENSDARG00000103651 3 0.758 - - - - - - 0.758 - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
82. tacr1b ENSDARG00000102900 1 0.758 - - - - - - 0.758 - - tachykinin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-091117-17]
83. epsti1 ENSDARG00000094578 33 0.758 - - - - - - 0.758 - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
84. zfpm2a ENSDARG00000040123 46 0.758 - - - - - - 0.758 - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
85. adat3 ENSDARG00000005640 96 0.758 - - - - - - 0.758 - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
86. CEACAM7 CEACAM7 46 0.758 - - - - - - 0.758 - -
87. tmc6a ENSDARG00000069787 3 0.758 - - - - - - 0.758 - - transmembrane channel-like 6a [Source:ZFIN;Acc:ZDB-GENE-081114-3]
88. v2ra1 ENSDARG00000104881 1 0.758 - - - - - - 0.758 - - vomeronasal 2 receptor, a1 [Source:ZFIN;Acc:ZDB-GENE-050419-156]
89. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 0.758 - - - - - - 0.758 - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
90. col28a1 col28a1 5 0.758 - - - - - - 0.758 - -
91. pacrg ENSDARG00000087556 25 0.758 - - - - - - 0.758 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
92. zgc:113098 zgc:113098 22 0.758 - - - - - - 0.758 - -
93. diaph2 ENSDARG00000076060 26 0.758 - - - - - - 0.758 - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
94. galca ENSDARG00000037064 12 0.758 - - - - - - 0.758 - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
95. SPP2 ENSDARG00000095590 5 0.758 - - - - - - 0.758 - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
96. CU183952.2 CU183952.2 6 0.758 - - - - - - 0.758 - -
97. si:dkey-246j7.1 ENSDARG00000095559 4 0.758 - - - - - - 0.758 - - si:dkey-246j7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-230]
98. kal1b kal1b 495 0.751 - - - - - - 0.751 - -
99. fbn1 39 0.748 - - - - - - 0.748 - - fibrillin 1
100. ispd ENSDARG00000005034 173 0.741 - - - - - - 0.741 - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]

There are 26 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA