Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-120j21.1

Gene Name Gene ID Reads Annotation
si:ch211-120j21.1 si:ch211-120j21.1 638










Genes with expression patterns similar to si:ch211-120j21.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-120j21.1 si:ch211-120j21.1 638 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. leo1 ENSDARG00000055357 1644 3.143 0.869 0.716 - - 0.821 0.737 - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
3. sh3yl1 ENSDARG00000074393 815 1.857 0.920 - - - 0.937 - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
4. ttll4 ENSDARG00000078935 1663 1.815 0.901 - - - 0.914 - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
5. usp49 ENSDARG00000000229 706 1.799 0.888 - - - 0.911 - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
6. si:dkey-28b4.8 ENSDARG00000002840 1277 1.797 0.884 - - - 0.913 - - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
7. cpsf5 cpsf5 1841 1.787 0.906 - - - 0.881 - - - -
8. BX323459.1 ENSDARG00000109508 1476 1.766 - - - - 0.923 - 0.843 - -
9. eva1ba ENSDARG00000102701 1480 1.764 0.839 - - - 0.925 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
10. myoz2b ENSDARG00000037266 2139 1.762 - - - - 0.918 - 0.844 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
11. pi4k2b ENSDARG00000013881 1337 1.756 0.831 - - - 0.925 - - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
12. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.742 - - - - 0.906 - 0.836 - - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
13. psma4 ENSDARG00000045928 5112 1.726 0.850 - - - 0.876 - - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
14. CABZ01087568.1 CABZ01087568.1 1487 1.725 0.825 - - - 0.900 - - - -
15. ube2f ENSDARG00000025754 1946 1.719 0.812 - - - 0.907 - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
16. tamm41 ENSDARG00000100157 1116 1.711 - 0.787 - - - - 0.924 - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
17. pigt ENSDARG00000075842 210 1.705 - - - - 0.950 - 0.755 - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
18. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.701 - - - - 0.869 - 0.832 - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
19. pvrl3l pvrl3l 943 1.692 0.884 - - - - - 0.808 - -
20. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.689 0.912 - - - - - 0.777 - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
21. ppp1r14aa ENSDARG00000011239 980 1.687 - 0.766 - - 0.921 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
22. pak2b ENSDARG00000018476 4331 1.683 - - - - 0.888 - 0.795 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
23. RNF5 ENSDARG00000075606 1730 1.679 0.899 0.780 - - - - - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
24. CU570681.1 CU570681.1 512 1.679 - - - - 0.951 0.728 - - -
25. chrnd ENSDARG00000019342 2728 1.674 - - - - 0.889 - 0.785 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
26. hoxd10a ENSDARG00000057859 1498 1.667 0.867 - - - 0.800 - - - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
27. asb2b ENSDARG00000102490 311 1.666 - - - - 0.929 - 0.737 - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
28. tmtc2 tmtc2 798 1.658 - - - - 0.923 - 0.735 - -
29. hsp90aa1.2 ENSDARG00000024746 5210 1.658 - - - - 0.840 - 0.818 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
30. sugp1 ENSDARG00000075936 826 1.657 - - - - 0.947 0.710 - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
31. CBFA2T3 ENSDARG00000079012 6799 1.655 0.889 - - - - - 0.766 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
32. snx27a ENSDARG00000033804 2249 1.648 - 0.759 - - 0.889 - - - - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
33. kazald3 ENSDARG00000053509 513 1.643 0.909 - - - - 0.734 - - - Kazal-type serine peptidase inhibitor domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-155]
34. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.641 - - - - 0.924 - 0.717 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
35. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.64 - - - - 0.889 0.751 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
36. sec22a ENSDARG00000078328 1207 1.64 0.887 - - - - - 0.753 - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
37. ablim2 ENSDARG00000055223 1934 1.639 - - - - 0.880 - 0.759 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
38. wu:fb15e04 wu:fb15e04 1713 1.636 0.907 - - - - - 0.729 - -
39. arglu1b ENSDARG00000018319 1110 1.635 0.893 - - - - 0.742 - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
40. st8sia6 ENSDARG00000021195 2244 1.633 0.932 - - - - - 0.701 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
41. eri1 ENSDARG00000044692, ENSDARG00000110387, ENSDARG00000116810 667 1.632 - 0.710 - - 0.922 - - - - exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-050522-39]
42. si:ch211-191i18.2 ENSDARG00000070141 1164 1.624 - - - - - 0.870 0.754 - - si:ch211-191i18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-769]
43. mapk3 ENSDARG00000070573 6842 1.622 - 0.737 - - 0.885 - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
44. wasf3 wasf3 3287 1.619 - - - - 0.864 - 0.755 - -
45. limch1a ENSDARG00000074275 2981 1.615 - - - - 0.752 - 0.863 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
46. reep1 ENSDARG00000014854 915 1.611 - - - - 0.904 - 0.707 - - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
47. GTSE1 ENSDARG00000013719 1115 1.604 - - - - 0.901 0.703 - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
48. ALDH1L2 ENSDARG00000070230 2550 1.603 - - 0.792 - - - 0.811 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
49. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 1.599 - - - - 0.888 - 0.711 - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
50. mrpl40 ENSDARG00000043554 2198 1.597 - - - - 0.887 - 0.710 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
51. tcta ENSDARG00000044194 1183 1.588 - - - - 0.883 - 0.705 - - T cell leukemia translocation altered [Source:ZFIN;Acc:ZDB-GENE-040718-325]
52. mycbp ENSDARG00000091001 1511 1.585 0.841 - - - 0.744 - - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
53. nr2f1b ENSDARG00000017168 1487 1.578 - - - - 0.861 - 0.717 - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
54. bub3 ENSDARG00000075883 1333 1.573 0.861 - - - - - 0.712 - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
55. paip2b ENSDARG00000008706 4255 1.566 0.845 0.721 - - - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
56. dock7 ENSDARG00000078675 1995 1.566 - - - - 0.851 - 0.715 - - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
57. camlg ENSDARG00000100409 2157 1.565 - 0.732 - - 0.833 - - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
58. zgc:65772 zgc:65772 2092 1.556 - - - - 0.736 - 0.820 - -
59. YEATS2 ENSDARG00000078767, ENSDARG00000097253 854 1.552 - 0.751 - - - - 0.801 - - YEATS domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-292]
60. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.551 - - - - 0.788 - 0.763 - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
61. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.544 - 0.703 - - 0.841 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
62. smarcc1a ENSDARG00000017397 2957 1.541 0.748 - - - - 0.793 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
63. anxa6 ENSDARG00000013335 3588 1.535 - - - - 0.753 - 0.782 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
64. synpo2b ENSDARG00000077157 1009 1.535 - - 0.747 - - - 0.788 - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
65. pfdn6 ENSDARG00000037108 2083 1.532 - - - - 0.802 - 0.730 - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
66. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.531 - 0.766 - - - - 0.765 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
67. atf3 ENSDARG00000007823 829 1.53 0.725 - - - - - 0.805 - - activating transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-728]
68. aamp ENSDARG00000045019 2818 1.526 - - - - 0.741 - 0.785 - - angio-associated, migratory cell protein [Source:ZFIN;Acc:ZDB-GENE-040426-2370]
69. lpl ENSDARG00000087697 2578 1.523 - - - - 0.798 - 0.725 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
70. dnajc18 ENSDARG00000056005 8084 1.518 - - - - 0.786 - 0.732 - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
71. hivep2 hivep2 422 1.514 - 0.784 - - - 0.730 - - -
72. cacna1sb ENSDARG00000042552 1320 1.512 - - 0.719 - - - 0.793 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
73. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 1.51 - - - - - 0.710 0.800 - - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
74. ing4 ENSDARG00000030716 5908 1.51 0.810 - - - 0.700 - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
75. rab5if ENSDARG00000074790 8807 1.509 - 0.742 - - - - 0.767 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
76. usp4 ENSDARG00000014770 1684 1.509 - 0.746 - - - - 0.763 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
77. abcf1 ENSDARG00000031795 8635 1.504 - - - - - 0.732 0.772 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
78. hadhb ENSDARG00000102055 9700 1.499 - 0.760 - - - - 0.739 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
79. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.499 0.786 - - - - - 0.713 - - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
80. MRPL21 ENSDARG00000003846 3244 1.494 - 0.732 - - 0.762 - - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
81. sox10 ENSDARG00000077467 1936 1.492 - - - - 0.783 - 0.709 - - SRY (sex determining region Y)-box 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]
82. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.492 - 0.712 - - - - 0.780 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
83. foxo3b ENSDARG00000042904 5046 1.488 - 0.712 - - - - 0.776 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
84. kdm2aa ENSDARG00000059653 2389 1.488 - 0.760 - - 0.728 - - - - lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
85. ccdc58 ENSDARG00000045351 972 1.486 0.726 - - - - - 0.760 - - coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]
86. egln1 egln1 3746 1.481 - 0.722 - - - - 0.759 - -
87. chac1 ENSDARG00000070426 17552 1.478 - - 0.713 - - - 0.765 - - ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
88. EML4_1 EML4_1 8736 1.475 0.753 0.722 - - - - - - -
89. hmbsa ENSDARG00000008840 2601 1.474 0.734 - - - - - 0.740 - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
90. mpdu1b ENSDARG00000040265 1968 1.47 0.704 - - - 0.766 - - - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
91. nudt3a ENSDARG00000016256 2713 1.47 - 0.736 - - - - 0.734 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
92. si:ch73-21k16.6 si:ch73-21k16.6 4896 1.467 - 0.726 - - - - 0.741 - -
93. atp5e 14858 1.46 - - - - - 0.731 0.729 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
94. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.46 0.718 - - - - - 0.742 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
95. atp5ia 4773 1.46 - - 0.758 - - 0.702 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
96. mrpl37 ENSDARG00000062916 1600 1.451 0.748 - - - - - 0.703 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
97. mier2 ENSDARG00000071413 789 1.447 - 0.717 - - - 0.730 - - - mesoderm induction early response 1, family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-795]
98. hoxb7a ENSDARG00000056030 1212 1.443 - 0.727 - - - - 0.716 - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
99. shrprbck1r ENSDARG00000059871 362 1.416 - 0.709 - - - - 0.707 - - sharpin and rbck1 related [Source:ZFIN;Acc:ZDB-GENE-080220-52]
100. rab23 ENSDARG00000004151 1077 1.411 - 0.703 - - - 0.708 - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]

There are 1714 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA