Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-120e1.6

Gene Name Gene ID Reads Annotation
si:ch211-120e1.6 si:ch211-120e1.6 292










Genes with expression patterns similar to si:ch211-120e1.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-120e1.6 si:ch211-120e1.6 292 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. INHBE INHBE 95 2.558 0.775 0.868 - - - 0.915 - - -
3. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.902 - 0.936 - 0.966 - - - - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
4. ftr67 ENSDARG00000098820 611 1.892 - 0.930 - 0.962 - - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
5. PHF13 ENSDARG00000102023 1102 1.844 - 0.976 - - - - 0.868 - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
6. ankrd50l ENSDARG00000007077 1115 1.84 - 0.941 - 0.899 - - - - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
7. CHORDC1 CHORDC1 544 1.808 - 0.902 - 0.906 - - - - -
8. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.789 - 0.954 - 0.835 - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
9. clec16a ENSDARG00000038094 501 1.752 - - - 0.929 - - 0.823 - - C-type lectin domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-040426-951]
10. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.748 - 0.903 - 0.845 - - - - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
11. ARHGEF15 ENSDARG00000100293 553 1.738 0.812 0.926 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
12. wdr54 ENSDARG00000010248 245 1.733 0.798 - - 0.935 - - - - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
13. CU929175.1 CU929175.1 200 1.731 - - - 0.925 - - 0.806 - -
14. coq3 ENSDARG00000069857, ENSDARG00000110000 708 1.73 - 0.902 - - - - 0.828 - - coenzyme Q3 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040718-364]
15. RPH3A_1 RPH3A_1 399 1.726 - 0.972 - - - - 0.754 - -
16. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.725 - 0.851 - 0.874 - - - - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
17. sec22a ENSDARG00000078328 1207 1.717 - 0.944 - 0.773 - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
18. AL929007.2 AL929007.2 117 1.702 - 0.964 - - - - 0.738 - -
19. rb1 ENSDARG00000006782 1445 1.683 0.765 0.918 - - - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
20. si:ch211-126i22.5 ENSDARG00000060911 209 1.673 - - - 0.945 - 0.728 - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
21. dot1l ENSDARG00000061992 602 1.671 - - - 0.956 - - 0.715 - - DOT1-like histone H3K79 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060503-341]
22. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 1.669 - 0.957 - - - - 0.712 - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
23. ms4a17a.8 ENSDARG00000043802 362 1.649 - 0.898 - - - - 0.751 - - membrane-spanning 4-domains, subfamily A, member 17A.8 [Source:ZFIN;Acc:ZDB-GENE-070705-365]
24. lmbr1l ENSDARG00000004745 861 1.642 - 0.881 - - - - 0.761 - - limb development membrane protein 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9906]
25. irs1 ENSDARG00000054087 1809 1.641 - 0.841 - 0.800 - - - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
26. pak4 ENSDARG00000018110 1962 1.616 - 0.704 - 0.912 - - - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
27. ARHGEF17 ENSDARG00000101644 625 1.599 - 0.869 - 0.730 - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
28. dhx34 ENSDARG00000061168 349 1.597 - - - 0.839 - - 0.758 - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
29. TRIM14 TRIM14 1424 1.594 - 0.805 - 0.789 - - - - -
30. naglu ENSDARG00000030156 378 1.591 - - - 0.882 - - 0.709 - - N-acetylglucosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-100726-2]
31. efhd1 ENSDARG00000043446 703 1.59 - - - 0.856 - 0.734 - - - EF-hand domain family, member D1 [Source:ZFIN;Acc:ZDB-GENE-030131-7461]
32. QPCT ENSDARG00000089717 1383 1.589 - 0.852 - 0.737 - - - - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
33. LRCH1 ENSDARG00000078778 407 1.572 - - - 0.837 - - 0.735 - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
34. SLC16A13 ENSDARG00000055342 183 1.567 0.717 0.850 - - - - - - - solute carrier family 16, member 13 (monocarboxylic acid transporter 13) [Source:ZFIN;Acc:ZDB-GENE-120907-2]
35. bmpr1ba ENSDARG00000104100 828 1.555 - 0.819 - 0.736 - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
36. si:ch211-208h7.4 si:ch211-208h7.4 1334 1.552 - 0.849 - - - - 0.703 - -
37. XCR1_1 XCR1_1 187 1.545 - - - - - 0.754 0.791 - -
38. cant1b_1 ENSDARG00000102977 447 1.544 - 0.814 - - - - 0.730 - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
39. BX537138.1 BX537138.1 1060 1.53 0.815 - - 0.715 - - - - -
40. dnph1 ENSDARG00000075730 403 1.528 0.704 - - 0.824 - - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
41. fhl1b ENSDARG00000056653 577 1.525 0.704 - - - - - 0.821 - - four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]
42. spry4 ENSDARG00000068732 2091 1.524 - 0.788 - - - - 0.736 - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
43. bcas3 ENSDARG00000090764, ENSDARG00000114497 601 1.513 0.714 - - 0.799 - - - - - breast carcinoma amplified sequence 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1257]
44. sema3e ENSDARG00000036571, ENSDARG00000116446 115 1.509 0.755 - - - - 0.754 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]
45. ddx56 ENSDARG00000020913 1070 1.496 - 0.723 - 0.773 - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
46. MTHFS ENSDARG00000104487 770 1.487 - 0.738 - - - - 0.749 - - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
47. C3H7orf55 C3H7orf55 359 1.486 - - - 0.766 - - 0.720 - -
48. ctsc ENSDARG00000101334 3691 1.485 - - - - - 0.714 0.771 - - cathepsin C [Source:ZFIN;Acc:ZDB-GENE-030619-9]
49. herpud1 ENSDARG00000024314 1207 1.479 - 0.767 - - - 0.712 - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
50. tra2b ENSDARG00000002168 3218 1.463 - - - 0.759 - - 0.704 - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
51. CR762484.3 CR762484.3 395 1.453 0.704 - - 0.749 - - - - -
52. as3mt ENSDARG00000027572 187 1.433 0.730 - - - - 0.703 - - - arsenite methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060312-15]
53. Sep-10_1 Sep-10_1 424 1.433 - - - 0.721 - 0.712 - - -
54. CR407594.2 CR407594.2 145 1.426 - - - - - 0.711 0.715 - -
55. creg1 ENSDARG00000105154 843 1.424 0.717 - - 0.707 - - - - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
56. NRBP2 NRBP2 127 0.991 - 0.991 - - - - - - -
57. wu:fd14a06 wu:fd14a06 243 0.987 - 0.987 - - - - - - -
58. zic5 ENSDARG00000016022 1034 0.986 - 0.986 - - - - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
59. amn ENSDARG00000062947 36 0.986 - 0.986 - - - - - - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
60. itgb1b.2 ENSDARG00000022689 523 0.985 - 0.985 - - - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
61. si:ch211-11n16.2 ENSDARG00000099779 417 0.983 - 0.983 - - - - - - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
62. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.983 - 0.983 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
63. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.979 - 0.979 - - - - - - - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
64. chsy3 ENSDARG00000069472 271 0.979 - 0.979 - - - - - - - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
65. il4r il4r 75 0.978 - 0.978 - - - - - - -
66. pnpla7a ENSDARG00000062986 1793 0.978 - 0.978 - - - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
67. si:ch211-132g1.3 ENSDARG00000089477 769 0.978 - 0.978 - - - - - - - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
68. bbs4 ENSDARG00000063522 247 0.977 - 0.977 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
69. cry5 ENSDARG00000019498 90 0.977 - 0.977 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
70. asmtl ENSDARG00000021433, ENSDARG00000114151 550 0.976 - 0.976 - - - - - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
71. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.976 - 0.976 - - - - - - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
72. shq1 ENSDARG00000058522 123 0.975 - 0.975 - - - - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
73. si:ch73-83c10.2 si:ch73-83c10.2 22 0.975 - 0.975 - - - - - - -
74. SLITRK6 ENSDARG00000098769 217 0.975 - - - 0.975 - - - - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
75. crfb12 ENSDARG00000052413 47 0.975 - 0.975 - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
76. BX321875.3 ENSDARG00000112569 24 0.975 - 0.975 - - - - - - -
77. zdhhc6 ENSDARG00000075721 1494 0.975 - 0.975 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
78. FOXO6_1 FOXO6_1 73 0.975 - 0.975 - - - - - - -
79. fam84a ENSDARG00000018921 375 0.975 - - - 0.975 - - - - - family with sequence similarity 84, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1247]
80. si:dkey-261l7.2 ENSDARG00000094345 51 0.974 - 0.974 - - - - - - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
81. si:dkey-27i16.3 si:dkey-27i16.3 494 0.974 - 0.974 - - - - - - -
82. fam69c ENSDARG00000105040 295 0.974 - 0.974 - - - - - - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
83. MSLNL MSLNL 41 0.974 - 0.974 - - - - - - -
84. mms19 ENSDARG00000079067 65 0.974 - - - 0.974 - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
85. fbln5 ENSDARG00000039273 105 0.974 - 0.974 - - - - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
86. si:ch211-191a16.2 ENSDARG00000095665 16 0.974 - 0.974 - - - - - - - si:ch211-191a16.2 [Source:ZFIN;Acc:ZDB-GENE-081028-45]
87. uroc1 ENSDARG00000070394 357 0.973 - 0.973 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
88. FP236276.2 FP236276.2 43 0.973 - 0.973 - - - - - - -
89. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.973 - 0.973 - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
90. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.973 - 0.973 - - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
91. lmf2a ENSDARG00000078094 352 0.972 - 0.972 - - - - - - - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
92. ch25h ENSDARG00000045190 35 0.972 - 0.972 - - - - - - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
93. ttc9c ENSDARG00000007025 463 0.972 - 0.972 - - - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
94. C5H11orf1 C5H11orf1 78 0.972 - 0.972 - - - - - - -
95. si:ch73-138e16.8 175 0.972 - 0.972 - - - - - - - si:ch73-138e16.8
96. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.972 - 0.972 - - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
97. bcl7a ENSDARG00000052907, ENSDARG00000111533 962 0.972 - 0.972 - - - - - - - BCL tumor suppressor 7A [Source:ZFIN;Acc:ZDB-GENE-000607-16]
98. CABZ01080492.1 CABZ01080492.1 495 0.972 - 0.972 - - - - - - -
99. esm1 ENSDARG00000104370 186 0.972 - 0.972 - - - - - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
100. med30 ENSDARG00000101115 133 0.972 - 0.972 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]

There are 1105 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA