Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-120c15.3

Gene Name Gene ID Reads Annotation
si:ch211-120c15.3 ENSDARG00000101807 19 si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]










Genes with expression patterns similar to si:ch211-120c15.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-120c15.3 ENSDARG00000101807 19 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
2. mkks ENSDARG00000016139 70 2.92 0.920 1.000 - - - - 1.000 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
3. gria4a ENSDARG00000037496 88 2.811 0.826 1.000 - - - - 0.985 - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
4. lrrn3 lrrn3 137 2.745 0.951 1.000 - - - - 0.794 - -
5. CABZ01060813.1 CABZ01060813.1 12 2 - 1.000 - - - - 1.000 - -
6. CCNO 21 2 - 1.000 - - - - 1.000 - - cyclin O
7. si:ch73-62b13.1 ENSDARG00000093269 11 2 - 1.000 - - - - 1.000 - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
8. taok3b ENSDARG00000094052 36 2 - 1.000 - - - - 1.000 - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
9. CU694952.2 CU694952.2 3 2 - 1.000 - - - - 1.000 - -
10. slc2a5 ENSDARG00000077875 5 2 - 1.000 - - - - 1.000 - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
11. adcyap1a ENSDARG00000004015 67 2 - 1.000 - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
12. BX248582.3 BX248582.3 3 2 - 1.000 - - - - 1.000 - -
13. prph2a ENSDARG00000038018 2 2 - 1.000 - - - - 1.000 - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
14. polg ENSDARG00000060951 33 1.928 0.928 1.000 - - - - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
15. nmu ENSDARG00000043299 67 1.928 0.928 - - - - - 1.000 - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
16. NSUN6 ENSDARG00000103478 29 1.928 0.928 - - - - - 1.000 - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
17. ncam2 ENSDARG00000017466 175 1.928 0.928 1.000 - - - - - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
18. si:dkey-211f1.2 si:dkey-211f1.2 11 1.923 - - - - 0.923 - 1.000 - -
19. entpd3 ENSDARG00000035309 263 1.92 0.920 - - - - - 1.000 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
20. CR848836.6 CR848836.6 93 1.92 0.920 1.000 - - - - - - -
21. tecrl2 tecrl2 11 1.916 0.916 - - - - - 1.000 - -
22. CU694319.1 CU694319.1 72 1.916 0.916 1.000 - - - - - - -
23. ftr14l ENSDARG00000078254 2 1.916 0.916 - - - - - 1.000 - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
24. GPR22_1 GPR22_1 28 1.916 0.916 - - - - - 1.000 - -
25. mlc1 ENSDARG00000063026 29 1.916 0.916 1.000 - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
26. ptchd4 ENSDARG00000008249 17 1.916 0.916 - - - - - 1.000 - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
27. si:dkey-122c11.4 si:dkey-122c11.4 13 1.916 0.916 - - - - - 1.000 - -
28. si:ch211-132b12.7 ENSDARG00000068374 30 1.916 0.916 - - - - - 1.000 - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
29. CR936540.2 CR936540.2 4 1.916 0.916 - - - - - 1.000 - -
30. scd ENSDARG00000033662 146 1.916 0.916 - - - - - 1.000 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
31. FP085391.2 FP085391.2 85 1.916 0.916 1.000 - - - - - - -
32. BIN3 ENSDARG00000099651 5 1.915 - 1.000 - - 0.915 - - - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
33. si:dkey-121b10.8 si:dkey-121b10.8 3 1.915 - - - - 0.915 - 1.000 - -
34. TNS3_1 TNS3_1 8 1.915 - 1.000 - - 0.915 - - - -
35. C10H5orf63 C10H5orf63 17 1.908 - - - - 0.908 - 1.000 - -
36. HIST1H4J_2 HIST1H4J_2 12 1.88 - 1.000 - 0.880 - - - - -
37. CR933820.2 CR933820.2 152 1.877 - 1.000 - 0.877 - - - - -
38. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.876 0.916 - - - - - 0.960 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
39. si:dkey-266f7.10 ENSDARG00000086613 7 1.867 - - - - 0.867 - 1.000 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
40. ANKRD13D ENSDARG00000098140 88 1.857 0.928 - - - - - 0.929 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
41. limk1a ENSDARG00000103467 97 1.846 0.925 0.921 - - - - - - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
42. evx2 ENSDARG00000059255 317 1.846 - - - 0.857 - - 0.989 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
43. C3AR1 18 1.839 0.916 - - - 0.923 - - - - C3a anaphylatoxin chemotactic receptor
44. figf 48 1.829 0.916 - - - 0.913 - - - - c-fos induced growth factor, transcript variant X2
45. si:dkey-4m13.3 6 1.82 0.916 - - 0.904 - - - - - si:dkey-4m13.3
46. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1.818 0.916 0.902 - - - - - - -
47. FGFBP3 FGFBP3 993 1.817 0.916 - - - - - 0.901 - -
48. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.8 0.948 - - - - - 0.852 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
49. sphkap ENSDARG00000017429 60 1.792 - 1.000 - - - - 0.792 - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
50. CABZ01063077.1 CABZ01063077.1 22 1.789 0.866 - - - - - 0.923 - -
51. slc1a1 ENSDARG00000020212 104 1.784 - - - 0.784 - - 1.000 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
52. si:ch1073-464p5.5 ENSDARG00000079544 5 1.779 - 1.000 0.779 - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
53. si:dkeyp-69c1.7 ENSDARG00000087165 31 1.777 0.777 - - - - - 1.000 - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
54. ENSDARG00000039608 ENSDARG00000039608 23 1.777 - - - - - - 1.000 0.777 -
55. shox2 ENSDARG00000075713 104 1.772 0.916 - - 0.856 - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
56. slc8a4a ENSDARG00000055154 90 1.768 0.966 - - - - - 0.802 - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
57. si:dkey-238f9.1 ENSDARG00000079446 51 1.764 0.920 - - - - - 0.844 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
58. CHD6 ENSDARG00000017244 219 1.761 0.761 - - - - - 1.000 - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
59. GRIN3A ENSDARG00000075802 27 1.759 - 1.000 - - - - 0.759 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
60. stmn4l ENSDARG00000043932 654 1.758 0.784 - - - - - 0.974 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
61. NLRC5 ENSDARG00000024631 11 1.756 0.756 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
62. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1.748 - - 0.748 - - - 1.000 - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
63. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1.747 - 0.747 - - - - 1.000 - -
64. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1.747 - 0.747 - - - - 1.000 - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
65. LMTK3 LMTK3 222 1.737 0.853 - - - - - 0.884 - -
66. crygn2 ENSDARG00000030411 2551 1.737 0.828 - - 0.909 - - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
67. scrt2 ENSDARG00000056175 4331 1.734 0.824 - - - - - 0.910 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
68. lhfpl4a ENSDARG00000111810 206 1.73 0.833 - - - - - 0.897 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
69. npb ENSDARG00000078828 230 1.725 0.828 - - 0.897 - - - - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
70. BX530409.1 BX530409.1 65 1.72 - - - 0.720 - - 1.000 - -
71. fgf13b ENSDARG00000056633 455 1.719 0.869 - - - - - 0.850 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
72. mpz ENSDARG00000038609 1740 1.719 - 1.000 - - - - 0.719 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
73. gata1b ENSDARG00000059130 151 1.716 - 1.000 - - - - - - 0.716 GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
74. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.715 0.821 - - - - - 0.894 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
75. BTBD17 BTBD17 53 1.715 - - - 0.715 - - 1.000 - -
76. nlgn3b ENSDARG00000062376 171 1.711 0.928 - - - - - 0.783 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
77. ERICH1 18 1.704 - 1.000 0.704 - - - - - - glutamate rich 1
78. sdccag3 239 1.697 0.916 0.781 - - - - - - - serologically defined colon cancer antigen 3, transcript variant X2
79. GRM8_1 GRM8_1 85 1.692 0.916 - - - - - 0.776 - -
80. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.689 0.837 - - - - - 0.852 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
81. si:dkey-208k4.1 si:dkey-208k4.1 15 1.663 0.916 0.747 - - - - - - -
82. PDZD4 ENSDARG00000090564 131 1.661 0.859 - - - - - 0.802 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
83. si:dkey-92j12.6 211 1.654 0.907 0.747 - - - - - - - si:dkey-92j12.6
84. rnf165a ENSDARG00000077906 133 1.65 0.806 - - - - - 0.844 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
85. CABZ01070258.1 ENSDARG00000105687 3643 1.646 0.835 - - - - - 0.811 - -
86. bckdhb ENSDARG00000014676 17 1.645 0.916 0.729 - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
87. CT027762.3 CT027762.3 17 1.632 0.920 0.712 - - - - - - -
88. stxbp5a ENSDARG00000002656 318 1.625 0.767 - - - - - 0.858 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
89. rab3da ENSDARG00000018107 28 1.624 0.916 - - - - - - 0.708 - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
90. si:dkey-175g6.2 ENSDARG00000086665 39 1.623 0.847 - - - - - 0.776 - - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
91. si:dkey-253a1.2 si:dkey-253a1.2 52 1.622 0.717 - - - - - 0.905 - -
92. mir219-2 129 1.615 0.733 - - - - - 0.882 - - microRNA 219-2
93. KLHL14 ENSDARG00000045275 155 1.596 0.779 - - - - - 0.817 - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
94. rgs20 ENSDARG00000038859 331 1.586 0.737 - - - - - 0.849 - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
95. EPB41L1 EPB41L1 1896 1.579 0.704 - - - - - 0.875 - -
96. sv2bb ENSDARG00000060711 196 1.575 0.799 - - - - - 0.776 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
97. pcdh18a ENSDARG00000089805 1096 1.574 0.777 - - - - - 0.797 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
98. SPOCK1 ENSDARG00000074644 794 1.556 - 0.850 - - - - 0.706 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
99. P2RY1 ENSDARG00000105281 45 1.551 0.820 - - - - - 0.731 - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
100. si:dkey-162h11.3 41 1.55 - - 0.779 - 0.771 - - - - si:dkey-162h11.3, transcript variant X2

There are 1624 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA