Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-120c15.1

Gene Name Gene ID Reads Annotation
si:ch211-120c15.1 si:ch211-120c15.1 20










Genes with expression patterns similar to si:ch211-120c15.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-120c15.1 si:ch211-120c15.1 20 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000
2. mettl25 ENSDARG00000045754 36 2.65 - 1.000 - - - 0.734 0.916 - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
3. nid2b ENSDARG00000009471 4 2 - 1.000 - - - - 1.000 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
4. si:dkeyp-82h4.1 ENSDARG00000096463 18 2 1.000 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
5. rnf150a_1 ENSDARG00000024827 12 2 1.000 - - - - - 1.000 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
6. bmp1b ENSDARG00000028053 25 2 1.000 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
7. traf1 ENSDARG00000069482 50 2 1.000 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
8. si:ch211-188i4.4 5 2 1.000 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
9. adipoqa ENSDARG00000062228 7 2 1.000 - - - - - 1.000 - - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
10. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 2 1.000 1.000 - - - - - - -
11. mcm5_1 ENSDARG00000019507 10 2 1.000 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
12. sult1st3 ENSDARG00000018361 7 2 - - - 1.000 - - 1.000 - - sulfotransferase family 1, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030804-28]
13. CU457778.1 ENSDARG00000098976 38 2 - 1.000 - - - - 1.000 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
14. n6amt2 7 2 - 1.000 - - - - 1.000 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
15. HYKK_1 HYKK_1 4 2 - 1.000 - - - - 1.000 - -
16. zgc:165409_1 ENSDARG00000091385 65 1.987 - 1.000 - - - - 0.987 - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
17. fermt3a fermt3a 56 1.962 - 1.000 - - - - 0.962 - -
18. CR388132.1 ENSDARG00000097728 61 1.959 0.959 - - - - - 1.000 - -
19. phf21aa ENSDARG00000006878 31 1.944 - 1.000 - 0.944 - - - - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
20. slc1a9 ENSDARG00000098269 12 1.916 - 1.000 - - - - 0.916 - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
21. LPL ENSDARG00000087697 18 1.916 1.000 - - - - - 0.916 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
22. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1.916 - 1.000 - - - 0.916 - - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
23. THAP9 THAP9 8 1.882 - - - 1.000 - - 0.882 - -
24. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.853 1.000 - - - - - 0.853 - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
25. dmrt1 ENSDARG00000007349 16 1.842 - 1.000 - - - - 0.842 - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
26. hsp70l_1 ENSDARG00000055723 72 1.825 0.825 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
27. chrna6 ENSDARG00000055559 60 1.825 0.825 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
28. CABZ01021538.1 CABZ01021538.1 67 1.824 0.824 1.000 - - - - - - -
29. si:ch73-269m14.4 ENSDARG00000086612 20 1.816 - - - 1.000 - - 0.816 - - si:ch73-269m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-94]
30. sla2 ENSDARG00000020788, ENSDARG00000115055 13 1.816 0.981 - - 0.835 - - - - - Src-like-adaptor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-98]
31. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.814 - - - 0.862 - - 0.952 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
32. LYPLAL1 ENSDARG00000088764 87 1.812 - 0.865 - - - - 0.947 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
33. SLC47A1_2 SLC47A1_2 50 1.806 1.000 - - - - - 0.806 - -
34. itpr2 ENSDARG00000011909 3 1.802 - 1.000 - - - 0.802 - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
35. si:dkey-222e15.4 10 1.802 - - - - - 0.802 1.000 - - si:dkey-222e15.4, transcript variant X4
36. sfi1 ENSDARG00000053992 1075 1.781 0.872 - - - - - 0.909 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
37. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1.754 - 1.000 - - - - 0.754 - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
38. galr1 galr1 9 1.744 - 1.000 - - 0.744 - - - -
39. odf3l2 36 1.731 - - - - 0.744 - 0.987 - - outer dense fiber of sperm tails 3-like 2
40. MLLT4 MLLT4 67 1.729 - 1.000 - - 0.729 - - - -
41. DNAI1 DNAI1 11 1.71 - - - - - - 1.000 0.710 -
42. CU915778.2 CU915778.2 194 1.704 - 0.880 - - - - 0.824 - -
43. pycr1 pycr1 1258 1.702 - 1.000 - - - - 0.702 - -
44. s100a1 ENSDARG00000015543 274 1.699 - 0.937 - - - 0.762 - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
45. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.688 0.860 - - - - 0.828 - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
46. sc:d217 ENSDARG00000079645 32 1.684 0.809 0.875 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
47. TSHZ2 ENSDARG00000079201 301 1.644 0.868 - - - - - 0.776 - - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
48. FAM120A ENSDARG00000075021 73 1.642 - 0.726 - - - - 0.916 - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
49. si:ch73-173m3.3 si:ch73-173m3.3 425 1.623 0.751 0.872 - - - - - - -
50. ralgapa1 ENSDARG00000076889 36 1.616 - - - 0.723 - - 0.893 - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
51. si:dkey-14d8.9 si:dkey-14d8.9 66 1.614 - 0.771 - - - - 0.843 - -
52. slc24a5 ENSDARG00000024771 107 1.516 - 0.718 - - - 0.798 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-031210-1]
53. CABZ01034707.1 CABZ01034707.1 122 1.515 - - - 0.715 - - 0.800 - -
54. zbtb34 ENSDARG00000013492 32 1.456 - - - - 0.702 - 0.754 - - zinc finger and BTB domain containing 34 [Source:ZFIN;Acc:ZDB-GENE-050624-2]
55. nxph2a ENSDARG00000063224 75 1.437 - - - - 0.710 - 0.727 - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
56. esr2b ENSDARG00000034181 20 1 1.000 - - - - - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
57. mmp23bb ENSDARG00000009825 133 1 1.000 - - - - - - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
58. uckl1a ENSDARG00000001686 21 1 1.000 - - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
59. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - 1.000 - - - - - - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
60. kif20a ENSDARG00000044491 12 1 - 1.000 - - - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
61. BX469915.2 BX469915.2 48 1 1.000 - - - - - - - -
62. FAIM2 FAIM2 43 1 - 1.000 - - - - - - -
63. EFEMP1_1 EFEMP1_1 8 1 - - - - - - 1.000 - -
64. CSF3 CSF3 4 1 - - - - - - 1.000 - -
65. ovca2 ENSDARG00000103748 38 1 - - - - - - 1.000 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
66. zgc:158654 19 1 1.000 - - - - - - - - zgc:158654, transcript variant X1
67. c1qtnf1 ENSDARG00000088878 4 1 - - - - - - 1.000 - - C1q and TNF related 1 [Source:ZFIN;Acc:ZDB-GENE-050417-427]
68. U1_4 U1_4 0 1 - 1.000 - - - - - - -
69. zgc:162235 zgc:162235 9 1 - - - 1.000 - - - - -
70. CABZ01031998.1 CABZ01031998.1 3 1 - - - - - - 1.000 - -
71. mrap ENSDARG00000091992 9 1 - - - 1.000 - - - - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
72. MFAP4_3 MFAP4_3 7 1 - 1.000 - - - - - - -
73. CABZ01057951.1 CABZ01057951.1 10 1 - 1.000 - - - - - - -
74. cacng2a ENSDARG00000032565 99 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
75. nphs1 ENSDARG00000060758 5 1 - - - - - - 1.000 - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
76. antxr1a ENSDARG00000025672 32 1 - - - - - - 1.000 - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
77. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - 1.000 - - - - - - -
78. arhgef9a ENSDARG00000061746 58 1 - 1.000 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
79. adam10b ENSDARG00000015502 26 1 - 1.000 - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
80. mc2r ENSDARG00000054949 1 1 - - - 1.000 - - - - - melanocortin 2 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-2]
81. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 1 - - - - - - 1.000 - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
82. lrrc18b ENSDARG00000076236 5 1 - 1.000 - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
83. lsm10 5 1 - 1.000 - - - - - - - LSM10, U7 small nuclear RNA associated
84. si:ch211-108c6.2 14 1 - 1.000 - - - - - - - si:ch211-108c6.2
85. BX511061.2 BX511061.2 30 1 1.000 - - - - - - - -
86. si:ch211-150o20.5 si:ch211-150o20.5 1 1 1.000 - - - - - - - -
87. CU896555.1 CU896555.1 27 1 - - - - - - 1.000 - -
88. C4H12orf56 C4H12orf56 16 1 - - - 1.000 - - - - -
89. LRFN4_1 LRFN4_1 5 1 - 1.000 - - - - - - -
90. BX323444.2 ENSDARG00000117710 13 1 1.000 - - - - - - - -
91. pyyb ENSDARG00000035832 18 1 1.000 - - - - - - - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
92. gdf9 ENSDARG00000003229 4 1 1.000 - - - - - - - - growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
93. zgc:173593 ENSDARG00000077360 10 1 - 1.000 - - - - - - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
94. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1 1.000 - - - - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
95. bco2b ENSDARG00000041715 13 1 1.000 - - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
96. pcyt1ba ENSDARG00000058162 206 1 - 1.000 - - - - - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
97. hsd3b1 ENSDARG00000069926 35 1 - - - 1.000 - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
98. CMA1_3 CMA1_3 0 1 - 1.000 - - - - - - -
99. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - 1.000 - - - - - - -
100. il12bb ENSDARG00000054542 6 1 - 1.000 - - - - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]

There are 1152 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA