Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-11n16.2

Gene Name Gene ID Reads Annotation
si:ch211-11n16.2 ENSDARG00000099779 417 si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]










Genes with expression patterns similar to si:ch211-11n16.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-11n16.2 ENSDARG00000099779 417 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
2. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 2.582 0.832 0.988 - 0.762 - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
3. C18H15orf61 C18H15orf61 104 1.817 0.826 0.991 - - - - - - -
4. dtymk ENSDARG00000052103 239 1.768 - 0.971 - - - - 0.797 - - deoxythymidylate kinase (thymidylate kinase) [Source:ZFIN;Acc:ZDB-GENE-990603-11]
5. cnstb ENSDARG00000042759 105 1.758 0.766 0.992 - - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
6. fbln5 ENSDARG00000039273 105 1.748 - 0.993 - 0.755 - - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
7. FHOD3 FHOD3 422 1.729 - 0.808 - - - - 0.921 - -
8. cib1 ENSDARG00000103118 291 1.723 - 0.966 - - - - 0.757 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
9. lyn ENSDARG00000067916, ENSDARG00000107511 109 1.718 0.766 0.952 - - - - - - - LYN proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040912-7]
10. C18H16orf70 C18H16orf70 542 1.71 - 0.958 - - - - 0.752 - -
11. ptgis ENSDARG00000060094, ENSDARG00000113227 82 1.692 - - - 0.800 - - 0.892 - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
12. sc5d ENSDARG00000044642 549 1.672 - 0.954 - - - - 0.718 - - sterol-C5-desaturase [Source:ZFIN;Acc:ZDB-GENE-040912-56]
13. AL929092.1 ENSDARG00000092217 50 1.654 0.741 - - - - - 0.913 - -
14. ino80db ENSDARG00000062226 504 1.645 - 0.907 - - - - 0.738 - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
15. drd4a ENSDARG00000038363 82 1.64 - - - 0.750 - - 0.890 - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
16. si:ch211-171h4.7 ENSDARG00000088408 168 1.639 0.826 - - - - - 0.813 - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
17. ugt5b2 ENSDARG00000101495 512 1.638 - 0.903 - - - - 0.735 - - UDP glucuronosyltransferase 5 family, polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-100406-4]
18. erbb3a ENSDARG00000006202 903 1.627 - 0.755 - - - - 0.872 - - erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
19. irs1 ENSDARG00000054087 1809 1.625 - 0.836 - - - - 0.789 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
20. cpeb4 cpeb4 57 1.617 0.774 - - - - - 0.843 - -
21. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.61 0.718 - - - - - 0.892 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
22. si:ch211-194e15.5 ENSDARG00000061804 253 1.591 - - - - 0.779 - 0.812 - - si:ch211-194e15.5 [Source:ZFIN;Acc:ZDB-GENE-060503-393]
23. gpr143 ENSDARG00000034572 559 1.555 0.765 - - - - - 0.790 - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
24. cdh13 ENSDARG00000014215 106 1.552 0.727 - - - - - 0.825 - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
25. SLC36A4 ENSDARG00000039661 175 1.552 0.851 - - - - - 0.701 - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
26. xdh ENSDARG00000055240 250 1.528 0.826 - - - - - 0.702 - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
27. tnfrsf1b ENSDARG00000070165 467 1.518 - - - 0.760 - - 0.758 - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
28. timm17b ENSDARG00000060124 125 1.515 0.795 - - - - - 0.720 - - translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-081104-144]
29. si:dkey-71p21.9 si:dkey-71p21.9 603 1.504 - 0.725 - - - - 0.779 - -
30. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.501 - 0.760 - - - - 0.741 - - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
31. banp ENSDARG00000017562 296 1.496 0.715 - - - - - 0.781 - - BTG3 associated nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050522-54]
32. DOCK4 DOCK4 78 1.455 0.753 - 0.702 - - - - - -
33. wu:fd44f01 wu:fd44f01 391 1.445 0.722 - - - - - 0.723 - -
34. rd3 ENSDARG00000031600 1085 1.443 0.703 - - 0.740 - - - - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
35. tnfrsf1a ENSDARG00000018569 842 1.431 - - - - - 0.703 0.728 - - tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
36. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.998 - 0.998 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
37. FP236276.2 FP236276.2 43 0.994 - 0.994 - - - - - - -
38. cry5 ENSDARG00000019498 90 0.994 - 0.994 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
39. ch25h ENSDARG00000045190 35 0.993 - 0.993 - - - - - - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
40. si:dkey-261l7.2 ENSDARG00000094345 51 0.993 - 0.993 - - - - - - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
41. bbs4 ENSDARG00000063522 247 0.993 - 0.993 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
42. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.993 - 0.993 - - - - - - - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
43. uroc1 ENSDARG00000070394 357 0.993 - 0.993 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
44. gpr112b gpr112b 28 0.993 - 0.993 - - - - - - -
45. MSLNL MSLNL 41 0.993 - 0.993 - - - - - - -
46. si:ch211-191a16.2 ENSDARG00000095665 16 0.993 - 0.993 - - - - - - - si:ch211-191a16.2 [Source:ZFIN;Acc:ZDB-GENE-081028-45]
47. shq1 ENSDARG00000058522 123 0.992 - 0.992 - - - - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
48. il4r il4r 75 0.992 - 0.992 - - - - - - -
49. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.992 - 0.992 - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
50. fam69c ENSDARG00000105040 295 0.992 - 0.992 - - - - - - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
51. itgb1b.2 ENSDARG00000022689 523 0.992 - 0.992 - - - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
52. crfb12 ENSDARG00000052413 47 0.992 - 0.992 - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
53. si:ch73-83c10.2 si:ch73-83c10.2 22 0.992 - 0.992 - - - - - - -
54. FOXO6_1 FOXO6_1 73 0.992 - 0.992 - - - - - - -
55. BX321875.3 ENSDARG00000112569 24 0.992 - 0.992 - - - - - - -
56. ttc9c ENSDARG00000007025 463 0.991 - 0.991 - - - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
57. PHF13 ENSDARG00000102023 1102 0.991 - 0.991 - - - - - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
58. med30 ENSDARG00000101115 133 0.991 - 0.991 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
59. azi1_1 azi1_1 1375 0.991 - 0.991 - - - - - - -
60. zic5 ENSDARG00000016022 1034 0.99 - 0.990 - - - - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
61. CR759791.1 ENSDARG00000088591 160 0.99 - 0.990 - - - - - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
62. si:ch211-149b19.3 ENSDARG00000076011 306 0.99 - 0.990 - - - - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
63. matk ENSDARG00000074670 225 0.99 - 0.990 - - - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
64. epb41l4a ENSDARG00000040087 1013 0.99 - 0.990 - - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
65. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.99 - 0.990 - - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
66. esm1 ENSDARG00000104370 186 0.99 - 0.990 - - - - - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
67. CU861453.1 ENSDARG00000097192 271 0.99 - 0.990 - - - - - - -
68. TNFRSF14_3 TNFRSF14_3 135 0.989 - 0.989 - - - - - - -
69. lmf2a ENSDARG00000078094 352 0.988 - 0.988 - - - - - - - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
70. pou4f1 ENSDARG00000005559 821 0.988 - 0.988 - - - - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
71. ctdspla ENSDARG00000071673 1447 0.988 - 0.988 - - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
72. amn ENSDARG00000062947 36 0.988 - 0.988 - - - - - - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
73. gna14 ENSDARG00000035178 618 0.988 - 0.988 - - - - - - - guanine nucleotide binding protein (G protein), alpha 14 [Source:ZFIN;Acc:ZDB-GENE-040808-7]
74. crcp ENSDARG00000069373 730 0.987 - 0.987 - - - - - - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
75. zdhhc6 ENSDARG00000075721 1494 0.987 - 0.987 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
76. casp7 ENSDARG00000091836 657 0.986 - 0.986 - - - - - - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
77. NRBP2 NRBP2 127 0.986 - 0.986 - - - - - - -
78. LRIF1_1 LRIF1_1 228 0.986 - 0.986 - - - - - - -
79. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.986 - 0.986 - - - - - - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
80. rab34b ENSDARG00000010977 590 0.986 - 0.986 - - - - - - - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
81. CABZ01080492.1 CABZ01080492.1 495 0.986 - 0.986 - - - - - - -
82. asmtl ENSDARG00000021433, ENSDARG00000114151 550 0.985 - 0.985 - - - - - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
83. pnpla7a ENSDARG00000062986 1793 0.985 - 0.985 - - - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
84. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.984 - 0.984 - - - - - - - tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
85. AL929007.2 AL929007.2 117 0.984 - 0.984 - - - - - - -
86. C5H11orf1 C5H11orf1 78 0.984 - 0.984 - - - - - - -
87. tgm1 ENSDARG00000017799 442 0.984 - 0.984 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
88. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.984 - 0.984 - - - - - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
89. si:ch211-120e1.6 si:ch211-120e1.6 292 0.983 - 0.983 - - - - - - -
90. fam83fb ENSDARG00000104188 79 0.983 - 0.983 - - - - - - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
91. cdkn2c ENSDARG00000057610 179 0.983 - 0.983 - - - - - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
92. vars2 ENSDARG00000056717 283 0.983 - 0.983 - - - - - - - valyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-575]
93. LUZP1 ENSDARG00000075556 55 0.982 - 0.982 - - - - - - - leucine zipper protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-90]
94. WNT7A WNT7A 320 0.982 - 0.982 - - - - - - -
95. TRIM35_10 TRIM35_10 484 0.981 - 0.981 - - - - - - -
96. myof ENSDARG00000006112 618 0.981 - 0.981 - - - - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
97. skiv2l ENSDARG00000062206 268 0.981 - 0.981 - - - - - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
98. qtrtd1 243 0.981 - 0.981 - - - - - - - queuine tRNA-ribosyltransferase domain containing 1, transcript variant X1
99. zbtb4 ENSDARG00000105255 362 0.98 - 0.980 - - - - - - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
100. tdrd3 ENSDARG00000025421 633 0.98 - 0.980 - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]

There are 1299 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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