Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-11k18.4

Gene Name Gene ID Reads Annotation
si:ch211-11k18.4 ENSDARG00000087869 3298 si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]










Genes with expression patterns similar to si:ch211-11k18.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-11k18.4 ENSDARG00000087869 3298 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
2. slc39a7 ENSDARG00000104451 6368 3.386 - 0.718 - - - 0.864 - 0.864 0.940 solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
3. bcar1 ENSDARG00000056525 6563 3.286 - - 0.851 - - 0.859 0.736 0.840 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
4. elovl6l ENSDARG00000038639 1184 3.276 - 0.815 - - - 0.843 0.719 0.899 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
5. nmt1a ENSDARG00000052966 5918 2.734 - - 0.885 0.983 - - - 0.866 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
6. maff ENSDARG00000028957, ENSDARG00000111050 1809 2.622 - - 0.996 - - 0.882 0.744 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F [Source:ZFIN;Acc:ZDB-GENE-040426-1280]
7. snrpe ENSDARG00000033175 7462 2.611 - - 0.867 0.959 - - 0.785 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
8. myeov2 3351 2.582 - - - 0.970 - 0.870 0.742 - - myeloma overexpressed 2
9. pa2g4b ENSDARG00000070657 7999 2.581 - - 0.876 0.948 - - 0.757 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
10. emc3 ENSDARG00000020607 3406 2.53 - - - 0.988 - 0.786 0.756 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
11. coa5 ENSDARG00000094833 1988 2.518 - - 0.933 - - 0.838 0.747 - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
12. tmem50a ENSDARG00000015757 3244 2.454 - 0.860 - - - 0.754 0.840 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
13. xpot ENSDARG00000099652 3026 2.446 - 0.760 - 0.986 - 0.700 - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
14. cdc20 ENSDARG00000100741 3264 2.435 - 0.829 - - - 0.835 0.771 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
15. spcs1 ENSDARG00000059298 5327 2.4 - - - - - 0.898 0.765 - 0.737 signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
16. znf185 ENSDARG00000103917 7195 2.378 - - - - - 0.892 - 0.728 0.758 zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
17. magt1 ENSDARG00000058062 3903 2.332 - - - - - 0.775 0.725 - 0.832 magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
18. kansl1a ENSDARG00000090895 2593 2.313 - 0.727 - - - - 0.726 0.860 - KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
19. tmem170a ENSDARG00000056628, ENSDARG00000111549 737 2.305 - - - - - 0.808 0.710 - 0.787 transmembrane protein 170A [Source:ZFIN;Acc:ZDB-GENE-040426-1622]
20. CARKD 1398 2.27 - 0.743 - - - 0.773 0.754 - - carbohydrate kinase domain containing, transcript variant X7
21. rrbp1a ENSDARG00000013763 4723 2.269 - - - - - 0.776 0.731 0.762 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
22. nipa2 ENSDARG00000055912 1574 2.226 - 0.725 - - - 0.752 0.749 - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
23. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 2.178 - 0.732 - - - 0.739 0.707 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
24. psma3 ENSDARG00000086618 6200 1.898 - - 0.917 0.981 - - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
25. chmp4b chmp4b 5318 1.844 - - 0.989 - - - - 0.855 -
26. SSBP4 ENSDARG00000056483 5156 1.833 - - - 0.980 - - - 0.853 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
27. lrrtm1 ENSDARG00000052713 1041 1.826 - - - 0.993 - - - - 0.833 leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
28. krt1-19d ENSDARG00000023082 902 1.825 - - - 0.991 - 0.834 - - - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
29. si:ch73-52f15.5 ENSDARG00000095400 1368 1.809 - - - 0.993 - 0.816 - - - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
30. arpc4 ENSDARG00000054063 6150 1.804 - - - 0.968 - 0.836 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
31. acy3.2 ENSDARG00000005525 6441 1.793 - - - 0.981 - - - 0.812 - aspartoacylase (aminocyclase) 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040718-37]
32. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.791 - - 0.946 - - - - 0.845 - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
33. PLEKHA6 ENSDARG00000020328 2076 1.789 - - 0.920 - - - - 0.869 - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
34. ostc ENSDARG00000104901 16240 1.775 - - - - - 0.872 - - 0.903 oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
35. CABZ01055343.2 CABZ01055343.2 10312 1.775 - - - 0.974 - 0.801 - - -
36. nr1d2b ENSDARG00000009594 1144 1.763 - - - 0.993 - 0.770 - - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
37. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.758 - - - 0.962 - - - - 0.796 cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
38. ck2b ck2b 781 1.758 - - 0.936 - - 0.822 - - -
39. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.757 - - - - - - - 0.914 0.843 RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
40. exoc5 ENSDARG00000060323 2450 1.757 - - 0.935 - - - - - 0.822 exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
41. sertad2b ENSDARG00000055530 785 1.754 - - - - - 0.916 - - 0.838 SERTA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030616-569]
42. fam102bb ENSDARG00000002333 1483 1.751 - - - 0.993 - - 0.758 - - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
43. pip5k1aa ENSDARG00000100396 1644 1.751 - - 0.933 - - 0.818 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
44. tfap2c ENSDARG00000040606 4628 1.745 - - - - - - - 0.894 0.851 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
45. ppig ENSDARG00000044431 3427 1.741 - - - - - 0.899 0.842 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
46. arpc5a ENSDARG00000039142 5482 1.74 - - - - - 0.830 - 0.910 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
47. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 1.738 - - - 0.993 - - 0.745 - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
48. tfam ENSDARG00000063145 4524 1.737 - - 0.923 - - 0.814 - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
49. CABZ01057013.1 CABZ01057013.1 1308 1.734 - - - - - 0.813 - 0.921 -
50. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.733 - - - 0.977 - - - 0.756 - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
51. adh8b ENSDARG00000024278, ENSDARG00000116820 8008 1.725 - 0.761 - 0.964 - - - - - alcohol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-030529-2]
52. st6gal2 st6gal2 1570 1.724 - - - - - - - 0.891 0.833
53. WDR77 2463 1.723 - - - - - - 0.815 0.908 - WD repeat domain 77
54. dlg1l ENSDARG00000102216 1960 1.72 - 0.785 0.935 - - - - - - discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
55. rgs12b ENSDARG00000036774 5088 1.709 - - - - - - - 0.894 0.815 regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
56. LRP10 ENSDARG00000054539 1895 1.696 - 0.799 - - - - - 0.897 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
57. mxd3 ENSDARG00000098350 3040 1.696 - - - 0.985 - 0.711 - - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
58. efnb3b ENSDARG00000042277 5823 1.693 - - - 0.939 - - - 0.754 - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
59. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.689 - - - - - 0.826 - 0.863 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
60. mapk3 ENSDARG00000070573 6842 1.684 - - - 0.978 - - - - 0.706 mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
61. rbm8a ENSDARG00000016516 8789 1.683 - - 0.909 - - - 0.774 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
62. mfsd11 ENSDARG00000102828 1043 1.68 - 0.745 0.935 - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
63. SIK1 ENSDARG00000058606 1982 1.679 - - - - - 0.865 - - 0.814 salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
64. ALDH1L2 ENSDARG00000070230 2550 1.678 - - - - - - - 0.855 0.823 aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
65. eml2 ENSDARG00000008808 706 1.677 - 0.843 - - - 0.834 - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
66. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 1.673 - 0.768 - - - - - 0.905 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
67. msi2b ENSDARG00000032614 3095 1.672 - - - - - - - 0.902 0.770 musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
68. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.666 - - - - - 0.905 - - 0.761 isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
69. rabac1 ENSDARG00000004171 2708 1.663 - - - - - 0.797 - 0.866 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
70. clic1 ENSDARG00000103340 2235 1.658 - - - - - - 0.771 0.887 - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
71. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 1.657 - - - - - 0.718 - 0.939 - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
72. prkcsh ENSDARG00000004470 1424 1.656 - 0.780 - - - - - 0.876 - protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
73. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.655 - - - - - 0.754 - 0.901 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
74. casc5 1487 1.653 - - - - - 0.766 - 0.887 - cancer susceptibility candidate 5, transcript variant X3
75. cdv3 ENSDARG00000023028 12380 1.651 - - 0.849 - - - - 0.802 - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
76. C2CD2 ENSDARG00000105000 2573 1.65 - - - - - 0.818 - - 0.832 C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
77. dkc1 ENSDARG00000016484 7088 1.649 - - - 0.926 - - 0.723 - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
78. derl1 ENSDARG00000021905 4698 1.646 - - 0.861 - - - 0.785 - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
79. xbp1 ENSDARG00000035622 18416 1.634 - - 0.837 - - - - 0.797 - X-box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-011210-2]
80. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.634 - - - - - - 0.801 - 0.833 non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
81. araf ENSDARG00000054533 1132 1.633 - - - - - - 0.729 0.904 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
82. sh3bgrl3 ENSDARG00000098075 3071 1.632 - 0.801 - - - - - - 0.831 SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
83. arpc1a ENSDARG00000008383 7353 1.632 - - - - - 0.709 - 0.923 - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
84. dusp7 ENSDARG00000101413 1307 1.631 - - - - - 0.715 - 0.916 - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
85. tom1 ENSDARG00000104581 1457 1.63 - - - - - 0.751 - 0.879 - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
86. adipor1b ENSDARG00000042717 1348 1.629 - 0.719 - - - 0.910 - - - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
87. fkbp7 ENSDARG00000010962 2986 1.628 - 0.709 0.919 - - - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
88. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.625 - - - - - - 0.720 0.905 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
89. smg7 ENSDARG00000060767 2759 1.622 - - - - - 0.780 0.842 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
90. lamp1 1017 1.62 - 0.710 - - - - - 0.910 - lysosomal-associated membrane protein 1
91. ajuba ENSDARG00000077842 1152 1.618 - - - - - 0.767 - - 0.851 ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
92. pdxdc1 ENSDARG00000101886 1958 1.618 - - - - - 0.718 - 0.900 - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
93. map2k6 ENSDARG00000099184 8741 1.618 - - - - - 0.769 - 0.849 - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
94. serpinb1l4 ENSDARG00000096888 10462 1.616 - - - - - - - 0.818 0.798 serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7169]
95. golga4 ENSDARG00000075331 447 1.615 - 0.702 - - - - - 0.913 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
96. klhl11 ENSDARG00000045130 800 1.615 - - - - - 0.770 - - 0.845 kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
97. gnai2b ENSDARG00000017294 686 1.613 - - - - - 0.861 0.752 - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
98. eps8l1 1598 1.601 - 0.730 - - - - - 0.871 - eps8-like1, transcript variant X3
99. ell ENSDARG00000000568 1404 1.598 - 0.710 - - - - - 0.888 - elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
100. actr2a ENSDARG00000052438 5838 1.598 - - - - - 0.819 - - 0.779 ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]

There are 1727 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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