Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-11i5.3

Gene Name Gene ID Reads Annotation
si:ch211-11i5.3 si:ch211-11i5.3 7










Genes with expression patterns similar to si:ch211-11i5.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-11i5.3 si:ch211-11i5.3 7 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000 -
2. CABZ01112732.1 ENSDARG00000068453 4 2 1.000 - - - - - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
3. EDN3 14 2 - - - - 1.000 - 1.000 - - endothelin 3
4. gzmk ENSDARG00000028780 1 2 - - 1.000 - 1.000 - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
5. phox2bb ENSDARG00000091029 2 2 - - 1.000 - 1.000 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
6. slc34a1a ENSDARG00000028824 35 2 - - 1.000 - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
7. SNORD52 SNORD52 23 2 1.000 - - - - - 1.000 - -
8. BX649490.1 ENSDARG00000091718 7 2 - - - - 1.000 - 1.000 - - titin-like [Source:NCBI gene;Acc:101883412]
9. BX324198.1 BX324198.1 12 2 1.000 - - - - - 1.000 - -
10. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 2 - - - - 1.000 - 1.000 - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
11. spata7 ENSDARG00000075898 16 2 - - 1.000 - 1.000 - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
12. myo7bb ENSDARG00000077201 7 2 - - 1.000 - 1.000 - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
13. MYO7B MYO7B 8 2 - - - - 1.000 - 1.000 - -
14. si:dkey-102m7.3 ENSDARG00000100366 27 1.938 0.938 - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
15. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1.85 - - 1.000 - - - 0.850 - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
16. lcp2a ENSDARG00000055955 23 1.764 1.000 - - - - - 0.764 - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
17. CR376787.1 CR376787.1 10 1.735 - - 0.735 - - - 1.000 - -
18. zp3b ENSDARG00000039828 15 1.725 0.725 - - - 1.000 - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
19. coch ENSDARG00000024032 7 1.719 - - - - - - 1.000 0.719 - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
20. CR848664.1 CR848664.1 12 1.719 - - - - 1.000 - - 0.719 -
21. ZBED1_5 ZBED1_5 1 1.719 - - 1.000 - - - - 0.719 -
22. BX511182.1 BX511182.1 8 1.718 - - 1.000 - - - 0.718 - -
23. GANC ENSDARG00000074556 36 1.71 1.000 - - - - 0.710 - - - glucosidase, alpha; neutral C [Source:ZFIN;Acc:ZDB-GENE-130530-754]
24. pear1 ENSDARG00000060753 173 1.704 0.931 - - - - - 0.773 - - platelet endothelial aggregation receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091230-1]
25. trhrb ENSDARG00000036159 11 1.672 - - - - 0.756 - 0.916 - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
26. spdya ENSDARG00000059131 33 1.653 0.830 - - - - - 0.823 - - speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
27. tbc1d2b ENSDARG00000061986 247 1.605 0.808 - - - - - 0.797 - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
28. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.601 0.861 - - - - - 0.740 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
29. rbbp9 ENSDARG00000040713 12 1.58 0.861 - - - - - - 0.719 - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
30. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.544 0.710 - - - - - 0.834 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
31. vrk2 ENSDARG00000021547 45 1.5 - - - - 0.752 - 0.748 - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
32. CR352328.3 CR352328.3 9 1.498 - - - - - - 0.779 0.719 -
33. zgc:103759 ENSDARG00000019503 58 1.493 0.791 - - - - - 0.702 - - zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]
34. si:dkey-199l1.1 si:dkey-199l1.1 7 1.43 - - - - 0.711 - - 0.719 -
35. avpr2ab ENSDARG00000029219 97 1.429 - - - - - 0.725 0.704 - - arginine vasopressin receptor 2a, duplicate b [Source:ZFIN;Acc:ZDB-GENE-110411-48]
36. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
37. si:dkey-173l11.3 si:dkey-173l11.3 14 1 - - - - - - 1.000 - -
38. CR847893.4 CR847893.4 2 1 - - 1.000 - - - - - -
39. CR478286.1 CR478286.1 3 1 1.000 - - - - - - - -
40. capn3a ENSDARG00000041864 89 1 1.000 - - - - - - - - calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
41. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
42. trim62 ENSDARG00000060901 12 1 - - - - 1.000 - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
43. ENSDARG00000075665 ENSDARG00000075665 5 1 - - 1.000 - - - - - -
44. THSD7B THSD7B 15 1 1.000 - - - - - - - -
45. si:ch211-262a22.3 si:ch211-262a22.3 0 1 - - - - 1.000 - - - -
46. si:dkey-151m22.9 si:dkey-151m22.9 6 1 - - 1.000 - - - - - -
47. taar20b1 ENSDARG00000110415, ENSDARG00000110775, ENSDARG00000112935 1 1 - - - - 1.000 - - - - trace amine associated receptor 20b1 [Source:ZFIN;Acc:ZDB-GENE-060413-5]
48. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - 1.000 - -
49. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
50. SUSD1 ENSDARG00000058839 4 1 - - 1.000 - - - - - - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
51. zgc:172014 ENSDARG00000101775 3 1 - - - - - - 1.000 - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
52. n6amt2 7 1 - - 1.000 - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
53. Metazoa_SRP_14 Metazoa_SRP_14 0 1 - - 1.000 - - - - - -
54. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
55. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - 1.000 - -
56. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - 1.000 - - - -
57. pvrl4 155 1 - - - - - - 1.000 - - poliovirus receptor-related 4
58. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - - - 1.000 - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
59. slc34a1b ENSDARG00000054658 1 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
60. klc4_1 ENSDARG00000086985 22 1 - - - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
61. CLPX CLPX 2 1 - - 1.000 - - - - - -
62. CDH18 ENSDARG00000102769 4 1 1.000 - - - - - - - - cadherin 18 [Source:HGNC Symbol;Acc:HGNC:1757]
63. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
64. si:ch1073-416j23.1 ENSDARG00000055934 4 1 1.000 - - - - - - - - si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]
65. BX469910.2 ENSDARG00000096127 6 1 - - - - 1.000 - - - -
66. ZNF337_23 ZNF337_23 39 1 - - - - - - 1.000 - -
67. CR382281.1 ENSDARG00000100098 135 1 - - - - 1.000 - - - -
68. AL929220.1 ENSDARG00000103323 14 1 - - - - - - 1.000 - -
69. efemp2b ENSDARG00000020811 116 1 - - - - - - 1.000 - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
70. agt ENSDARG00000016412 17 1 - - - - 1.000 - - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
71. si:dkey-4p15.5 ENSDARG00000086272 7 1 - - - - - - 1.000 - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
72. BX321870.1 ENSDARG00000098519 9 1 - - - - - - 1.000 - -
73. ttll2 ENSDARG00000077853 9 1 - - - - - - 1.000 - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
74. DIAPH2 ENSDARG00000076060 1 1 - - 1.000 - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
75. arl8 ENSDARG00000094709 6 1 - - - - 1.000 - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
76. U6_27 U6_27 1 1 - - - - - - 1.000 - -
77. si:dkey-237j11.3 ENSDARG00000094303 1 1 - - 1.000 - - - - - - si:dkey-237j11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-239]
78. CU694385.1 CU694385.1 1 1 - - 1.000 - - - - - -
79. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - - 1.000 - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
80. si:dkey-76d18.1 si:dkey-76d18.1 0 1 - - - - 1.000 - - - -
81. 5_8S_rRNA 5_8S_rRNA 24 1 - - - - - - 1.000 - -
82. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - 1.000 - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
83. wdr27_1 ENSDARG00000053386 1 1 - - - - - - 1.000 - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
84. si:dkey-148b12.4 si:dkey-148b12.4 2 1 1.000 - - - - - - - -
85. irf1b ENSDARG00000043249 30 1 1.000 - - - - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
86. si:dkey-19n13.5 si:dkey-19n13.5 36 1 1.000 - - - - - - - -
87. dusp19 dusp19 0 1 - - - - 1.000 - - - -
88. ATG4D_1 ATG4D_1 1 1 1.000 - - - - - - - -
89. ccdc14 ENSDARG00000098734 3 1 - - - - 1.000 - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
90. tmem174 ENSDARG00000035388 2 1 - - - - 1.000 - - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
91. rag1 ENSDARG00000052122 13 1 1.000 - - - - - - - - recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
92. gnrhr2 ENSDARG00000003553, ENSDARG00000113696 0 1 - - - - 1.000 - - - - gonadotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090128-3]
93. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 1 1.000 - - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
94. SLC4A8 ENSDARG00000015531 16 1 1.000 - - - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
95. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1 - - - - - - 1.000 - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
96. mir144 0 1 - - - - 1.000 - - - - microRNA 144
97. PPHLN1 ENSDARG00000045692 4 1 - - - - - - 1.000 - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
98. si:dkey-156j15.1 ENSDARG00000109821 1 1 - - 1.000 - - - - - - si:dkey-156j15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-81]
99. CR388152.1 CR388152.1 7 1 - - - - - - 1.000 - -
100. PEG3_8 PEG3_8 1 1 - - 1.000 - - - - - -

There are 999 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA