Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-11c15.3

Gene Name Gene ID Reads Annotation
si:ch211-11c15.3 si:ch211-11c15.3 1279










Genes with expression patterns similar to si:ch211-11c15.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-11c15.3 si:ch211-11c15.3 1279 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. gap43 ENSDARG00000099744 4114 5.08 0.836 0.754 - - - 0.975 0.905 0.758 0.852 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
3. ndrg4 ENSDARG00000103937 1234 4.45 0.853 0.948 - - - 0.958 0.937 - 0.754 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
4. tuba2 ENSDARG00000045014 1490 4.168 0.762 - - - - 0.930 0.896 0.753 0.827 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
5. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 4.164 - 0.807 - - - 0.843 0.977 0.753 0.784 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
6. mllt11 ENSDARG00000071026 2518 4.118 0.757 - - - - 0.975 0.847 0.767 0.772 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
7. amph ENSDARG00000007663 599 4.093 0.768 0.751 - - - 0.896 0.973 0.705 - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
8. add2 ENSDARG00000074581 1402 3.967 0.795 - - - - 0.911 0.839 0.711 0.711 adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
9. ELOVL4 ELOVL4 3026 3.91 0.735 0.790 - - - - 0.860 0.703 0.822
10. stmn2a ENSDARG00000033234 2272 3.7 0.882 0.898 - - - 0.983 0.937 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
11. TUSC5 TUSC5 1436 3.559 0.884 0.730 - - - 0.968 0.977 - -
12. cadm3 ENSDARG00000057013 1545 3.539 0.871 - - - - 0.974 0.953 - 0.741 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
13. slc1a2b ENSDARG00000102453 3136 3.53 0.876 0.730 - - - 0.955 0.969 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
14. scn8aa ENSDARG00000005775 792 3.522 0.850 0.745 - - - 0.947 0.980 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
15. cdk5r1b ENSDARG00000045087 2075 3.516 0.905 - - - - 0.874 0.922 0.815 - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
16. tuba1c ENSDARG00000055216 8384 3.485 - - - - - 0.971 0.940 0.777 0.797 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
17. stmn2b ENSDARG00000070537 1586 3.482 0.755 0.826 - - - 0.977 0.924 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
18. MAP1A MAP1A 847 3.479 0.829 0.712 - - - 0.971 0.967 - -
19. SV2B SV2B 208 3.468 0.886 0.751 - - - 0.928 0.903 - -
20. lhx5 ENSDARG00000057936 785 3.454 0.885 - - - - 0.974 0.889 0.706 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
21. rusc1 ENSDARG00000078125 617 3.442 0.833 0.803 - - - 0.876 0.930 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
22. sypa ENSDARG00000042974, ENSDARG00000110528 3217 3.419 0.707 0.780 - - - 0.977 0.955 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
23. snap25a ENSDARG00000020609 4537 3.41 0.805 0.717 - - - 0.965 0.923 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
24. stx1b ENSDARG00000000503 2724 3.41 0.795 0.734 - - - 0.920 0.961 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
25. inab ENSDARG00000053248 3239 3.408 0.863 0.840 - - - 0.874 - - 0.831 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
26. atp2b3b ENSDARG00000023445 1424 3.392 0.937 0.708 - - - 0.971 0.776 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
27. fez1 ENSDARG00000023174 701 3.377 0.822 - - - - 0.887 0.957 0.711 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
28. nbeaa ENSDARG00000070080 862 3.37 - - - - - 0.839 0.968 0.775 0.788 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
29. rbfox3 rbfox3 1443 3.363 0.770 0.741 - - - 0.871 0.981 - -
30. nrxn2a ENSDARG00000061454 291 3.359 0.875 - - - - 0.800 0.885 - 0.799 neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
31. dpysl3 ENSDARG00000002587 4381 3.351 0.775 - - - - 0.886 0.928 - 0.762 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
32. syt11a ENSDARG00000057913 1145 3.337 0.731 0.778 - - - 0.975 0.853 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
33. si:ch73-21g5.7 ENSDARG00000093156 9412 3.308 - 0.723 - - - 0.927 0.932 0.726 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
34. nptx1l ENSDARG00000074671 569 3.281 0.843 0.712 - - - 0.929 0.797 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
35. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.278 0.709 0.793 - - - 0.887 0.889 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
36. ZFHX3 ENSDARG00000103057 7759 3.269 0.704 - - - - 0.906 0.914 0.745 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
37. dpysl4 ENSDARG00000103490 534 3.262 0.796 - - - - 0.771 0.949 - 0.746 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
38. C7H4orf48 C7H4orf48 1455 3.253 0.724 - - - - 0.973 0.784 0.772 -
39. st18 663 3.243 - - - - - 0.961 0.833 0.723 0.726 suppression of tumorigenicity 18, zinc finger
40. rtn1b ENSDARG00000021143 1682 3.239 0.709 - - - - 0.975 0.821 - 0.734 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
41. TMEM57 TMEM57 260 3.225 - - - - - 0.755 0.903 0.773 0.794
42. MAP6 MAP6 643 3.19 0.718 0.776 - - - 0.832 0.864 - -
43. lppr3a lppr3a 1294 3.188 - - - - - 0.866 0.770 0.770 0.782
44. RASGRF2 RASGRF2 644 3.139 0.743 - - - - 0.885 0.715 - 0.796
45. tmem35 ENSDARG00000052567 5685 3.126 0.704 - - - - 0.752 0.859 - 0.811 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
46. TUBB8P7 TUBB8P7 1353 3.106 0.807 0.746 - - - 0.836 - - 0.717
47. atp1a3a ENSDARG00000018259 5393 2.954 0.710 0.706 - - - 0.833 - 0.705 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
48. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.764 0.855 - - - - 0.976 0.933 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
49. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.745 0.859 - - - - 0.930 0.956 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
50. dpysl5a ENSDARG00000011141 1827 2.724 - - - - - 0.983 0.974 - 0.767 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
51. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.716 0.855 - - - - 0.949 0.912 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
52. syt9a ENSDARG00000003994 298 2.705 0.906 - - - - 0.916 0.883 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
53. sh3gl2 sh3gl2 1305 2.692 0.796 - - - - 0.948 0.948 - -
54. pnoca ENSDARG00000025024 467 2.69 0.812 - - - - 0.934 0.944 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
55. nrn1a ENSDARG00000071860 1311 2.687 0.830 - - - - 0.975 0.882 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
56. spock2 ENSDARG00000075393 791 2.671 0.788 - - - - 0.977 0.906 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
57. hmp19 2554 2.67 - - - - - 0.972 0.878 - 0.820 HMP19 protein
58. pou4f1 ENSDARG00000005559 821 2.669 0.866 - - - - 0.870 0.933 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
59. pcdh1gc5 ENSDARG00000104826 10052 2.661 - 0.794 - - - 0.986 0.881 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
60. adam11 ENSDARG00000079204 298 2.661 0.793 - - - - 0.924 0.944 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
61. scrt2 ENSDARG00000056175 4331 2.658 - 0.716 - - - 0.960 0.982 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
62. aplp1 ENSDARG00000098368 2317 2.658 0.856 - - - - 0.960 - - 0.842 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
63. nrarpb ENSDARG00000018958 6225 2.656 - - - - - 0.934 0.912 - 0.810 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
64. TUBB8P7_1 TUBB8P7_1 2722 2.649 0.822 - - - - 0.960 0.867 - -
65. gsx1 ENSDARG00000035735 1243 2.639 0.827 - - - - 0.855 0.957 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
66. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.638 - 0.846 - - - 0.867 0.925 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
67. atp6v0cb ENSDARG00000036577 3472 2.638 - - - - - 0.949 0.931 - 0.758 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
68. INA INA 950 2.634 0.747 - - - - 0.916 0.971 - -
69. pou4f2 ENSDARG00000069737 451 2.634 0.927 - - - - 0.928 0.779 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
70. ppp3ca ENSDARG00000004988 615 2.627 0.770 - - - - 0.951 0.906 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
71. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.627 0.738 - - - - 0.933 0.956 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
72. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.625 0.799 - - - - 0.893 0.933 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
73. stmn1b ENSDARG00000033655 9491 2.617 0.722 - - - - 0.961 0.934 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
74. slc32a1 ENSDARG00000059775 1092 2.614 - 0.702 - - - 0.954 0.958 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
75. pcsk1nl ENSDARG00000076170 1232 2.608 - 0.749 - - - 0.974 0.885 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
76. rab3ab ENSDARG00000043835 1267 2.606 0.714 - - - - 0.946 0.946 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
77. rap2ip rap2ip 681 2.601 - - - - - 0.942 0.839 - 0.820
78. slc1a3a ENSDARG00000104431 9888 2.598 0.776 - - - - 0.984 0.838 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
79. cers6 ENSDARG00000053583 247 2.597 0.801 - - - - 0.912 0.884 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
80. C19H7orf41 C19H7orf41 2243 2.596 - - - - - 0.912 0.939 - 0.745
81. gabra5 ENSDARG00000070730 156 2.593 0.746 - - - - 0.913 0.934 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
82. necap1 ENSDARG00000020798 612 2.586 0.769 - - - - 0.944 0.873 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
83. adcyap1b ENSDARG00000027740 1539 2.583 0.883 - - - - 0.974 0.726 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
84. eno2 ENSDARG00000014287 2162 2.581 0.784 - - - - 0.928 0.869 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
85. rcor2 ENSDARG00000008278 1678 2.58 - - - - - 0.930 0.832 0.818 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
86. nadl1.1 1200 2.576 - - - - - 0.908 0.885 - 0.783 neural adhesion molecule L1.1, transcript variant X1
87. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.573 - 0.826 - - - 0.953 0.794 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
88. adarb1a ENSDARG00000041609 476 2.573 0.720 - - - - 0.884 0.969 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
89. cnrip1a ENSDARG00000091683 1491 2.573 - - - - - 0.906 0.939 0.728 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
90. vsnl1a ENSDARG00000023228 1584 2.57 - 0.711 - - - 0.987 0.872 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
91. mdkb ENSDARG00000020708 5393 2.569 0.841 - - - - 0.970 0.758 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
92. calb1 ENSDARG00000031598 252 2.568 0.876 - - - - 0.859 0.833 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
93. snap25b ENSDARG00000058117 469 2.566 0.703 - - - - 0.907 0.956 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
94. SKOR2 SKOR2 1041 2.558 0.843 - - - - 0.737 0.978 - -
95. MAPK8IP1_1 MAPK8IP1_1 186 2.555 0.742 - - - - 0.903 0.910 - -
96. ttll7 ENSDARG00000062973 519 2.55 0.765 - - - - 0.984 0.801 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
97. ADAM22 ENSDARG00000060532 2259 2.547 - - - - - 0.943 0.900 0.704 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
98. SV2A ENSDARG00000059945 1278 2.544 0.858 - - - - - 0.916 - 0.770 synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
99. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.544 - - - - - - 0.923 0.768 0.853 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
100. golga7ba ENSDARG00000036295 1460 2.542 - 0.866 - - - - 0.874 - 0.802 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]

There are 2156 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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