Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-117l17.4

Gene Name Gene ID Reads Annotation
si:ch211-117l17.4 ENSDARG00000103534 24 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]










Genes with expression patterns similar to si:ch211-117l17.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-117l17.4 ENSDARG00000103534 24 5 - - 1.000 1.000 - 1.000 1.000 - 1.000 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
2. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1.957 - - - - - 0.957 - - 1.000
3. lpcat2 ENSDARG00000053010 137 1.891 - - - - - 0.942 0.949 - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
4. CABZ01074899.1 CABZ01074899.1 89 1.864 - - - - - 0.976 0.888 - -
5. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.793 - - - - - 0.793 1.000 - -
6. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 1.786 - - - - - 0.880 0.906 - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
7. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 1.716 - - - - - 0.743 0.973 - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
8. ripply2 ENSDARG00000070535 18 1.707 - - - 0.707 - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
9. alkbh6 ENSDARG00000077253 117 1.654 - - - - - 0.785 0.869 - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
10. si:ch211-152p11.8 46 1.648 - - - - - 0.867 - - 0.781 si:ch211-152p11.8, transcript variant X2
11. si:dkey-247i3.3 si:dkey-247i3.3 297 1.629 - - - - - 0.910 0.719 - -
12. zgc:77816 zgc:77816 800 1.597 - - - - - 0.708 0.889 - -
13. ZDHHC21 ENSDARG00000110709 295 1.53 - - - - - 0.795 0.735 - - zinc finger, DHHC-type containing 21 [Source:ZFIN;Acc:ZDB-GENE-080401-2]
14. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 1 - - - - - 1.000 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
15. ttr ENSDARG00000037191 11 1 - - - - - - 1.000 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
16. NINJ1 ENSDARG00000103663 43 1 - - - - - 1.000 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
17. thbs4a ENSDARG00000102777 625 1 - - - - - 1.000 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
18. si:dkey-3p4.4 si:dkey-3p4.4 2 1 - - - - - - - - 1.000
19. desmb ENSDARG00000005221, ENSDARG00000110245 3 1 - - - - - - - - 1.000 desmin b [Source:ZFIN;Acc:ZDB-GENE-061027-102]
20. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
21. ccdc41 ccdc41 97 1 - - - - - 1.000 - - -
22. glsa ENSDARG00000062812 1 1 - - - - - - - - 1.000 glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
23. BX323854.4 BX323854.4 3 1 - - - - - 1.000 - - -
24. trim62 ENSDARG00000060901 12 1 - - - - - - 1.000 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
25. snR50 snR50 1 1 - - - - - 1.000 - - -
26. dok1a ENSDARG00000078108 9 1 - - - - - 1.000 - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
27. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
28. TGFBR2 TGFBR2 2 1 - - - - - 1.000 - - -
29. cldn10l2 ENSDARG00000105042 11 1 - - - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
30. si:ch211-146g19.1 si:ch211-146g19.1 1 1 - - - - - - - - 1.000
31. CABZ01057951.1 CABZ01057951.1 10 1 - - - - - - - - 1.000
32. uts1 ENSDARG00000014927 35 1 - - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
33. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - 1.000 - - -
34. CABZ01112210.1 CABZ01112210.1 48 1 - - - - - 1.000 - - -
35. CMAS CMAS 10 1 - - - - - - - - 1.000
36. si:ch211-125e6.12 ENSDARG00000092090 3 1 - - - - - 1.000 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
37. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - - - - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
38. IGFN1_2 IGFN1_2 3 1 - - - - - - - - 1.000
39. CT573356.3 CT573356.3 2 1 - - - - - 1.000 - - -
40. TESPA1 ENSDARG00000053311 29 1 - - - - - 1.000 - - - thymocyte expressed, positive selection associated 1 [Source:ZFIN;Acc:ZDB-GENE-120727-10]
41. themis ENSDARG00000010619 5 1 - - - - - 1.000 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
42. slc25a19 ENSDARG00000100385 2 1 - - - - - 1.000 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
43. il17c ENSDARG00000057180, ENSDARG00000109701 3 1 - - - - - 1.000 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
44. m17 ENSDARG00000035435 28 1 - - - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
45. BX004880.2 BX004880.2 83 1 - - - - - 1.000 - - -
46. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - - - - - - - - 1.000
47. LAMC2 ENSDARG00000068288 37 1 - - - - - - 1.000 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
48. BICD1 BICD1 9 1 - - - - - 1.000 - - -
49. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - - 1.000 - - -
50. trpm5 ENSDARG00000059792 3 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
51. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - - - 1.000
52. MPPED1 ENSDARG00000088181 117 1 - - - - - - 1.000 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
53. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - - 1.000
54. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
55. CELA1_2 CELA1_2 2 1 - - - - - 1.000 - - -
56. crybb1l2 ENSDARG00000016793 723 1 - - - - - 1.000 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
57. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - - - - 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
58. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - - - - - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
59. TSPAN1 ENSDARG00000052027 4 1 - - - - - 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
60. ppp2r3a ENSDARG00000077722 7 1 - - - - - - - - 1.000 protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
61. NOX4 3 1 - - - - - 1.000 - - - NADPH oxidase 4
62. sox11a ENSDARG00000077811 25 1 - - - - - 1.000 - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
63. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
64. si:dkey-112e17.1 ENSDARG00000093201 1 1 - - - - - 1.000 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
65. oscp1a ENSDARG00000101222, ENSDARG00000104403 17 1 - - - - - 1.000 - - - organic solute carrier partner 1a [Source:ZFIN;Acc:ZDB-GENE-080204-2]
66. ftr58 ENSDARG00000071238 10 1 - - - - - 1.000 - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
67. FAM13C FAM13C 1 1 - - - - - - - - 1.000
68. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
69. guca1c ENSDARG00000030758 9 1 - - - - - - 1.000 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
70. FNDC3A ENSDARG00000105503 11 1 - - - - - 1.000 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
71. syt6a ENSDARG00000076730 4 1 - - - - - 1.000 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
72. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
73. si:ch211-22d5.2 ENSDARG00000079031 3 1 - - - - - - - - 1.000 si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
74. vtg3 ENSDARG00000016448 8 1 - - - - - 1.000 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
75. olfcg2 ENSDARG00000101083 8 1 - - - - - 1.000 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
76. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
77. CABZ01084273.1 CABZ01084273.1 16 1 - - - - - 1.000 - - -
78. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
79. si:ch211-281k19.2 ENSDARG00000098133 1 1 - - - - - - - - 1.000 si:ch211-281k19.2 [Source:ZFIN;Acc:ZDB-GENE-090311-35]
80. si:ch211-219a15.3 ENSDARG00000087659 12 1 - - - - - 1.000 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
81. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - - 1.000 - -
82. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - - - - - - - 1.000
83. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
84. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
85. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - - - - - - 1.000 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
86. C12H16orf93 C12H16orf93 1 1 - - - - - 1.000 - - -
87. gp1bb ENSDARG00000074441 116 1 - - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
88. CST7 CST7 22 1 - - - - - - - - 1.000
89. slc5a9 ENSDARG00000005518 16 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
90. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
91. ccdc14 ENSDARG00000098734 3 1 - - - - - 1.000 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
92. CR936977.1 ENSDARG00000100144 4 1 - - - - - - - - 1.000
93. TMEM121_1 TMEM121_1 22 1 - - - - - 1.000 - - -
94. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
95. BX323557.2 BX323557.2 1 1 - - - - - - - - 1.000
96. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - - - 1.000 - -
97. si:ch211-180p9.2 si:ch211-180p9.2 1 1 - - - - - - - - 1.000
98. zgc:136254 ENSDARG00000068465 27 1 - - - - - - 1.000 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
99. zgc:173856 ENSDARG00000045424 5 1 - - - - - - - - 1.000 zgc:173856 [Source:ZFIN;Acc:ZDB-GENE-030131-5358]
100. URB1 ENSDARG00000060308 78 1 - - - - - 1.000 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]

There are 1014 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA