Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-117i10.10

Gene Name Gene ID Reads Annotation
si:ch211-117i10.10 si:ch211-117i10.10 18










Genes with expression patterns similar to si:ch211-117i10.10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-117i10.10 si:ch211-117i10.10 18 7 1.000 1.000 1.000 1.000 1.000 1.000 - - 1.000
2. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 2 - 1.000 - - - 1.000 - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
3. tmem168b ENSDARG00000062168 17 2 1.000 - - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
4. fasn_1 ENSDARG00000087657 31 1.981 0.981 1.000 - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
5. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 1.897 0.981 0.916 - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
6. HPX ENSDARG00000012609 781 1.892 0.892 - - - - 1.000 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
7. AP5B1 ENSDARG00000078805 62 1.862 0.973 0.889 - - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
8. notchl ENSDARG00000088308 28 1.837 - 1.000 - - 0.837 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
9. ANKRD27 ENSDARG00000089207 3 1.826 - - 0.826 - - 1.000 - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
10. leprel4 leprel4 34 1.813 0.937 0.876 - - - - - - -
11. ehf ENSDARG00000052115, ENSDARG00000112589 24 1.806 - 0.806 - - - 1.000 - - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
12. jam3a ENSDARG00000114589 630 1.787 - - - - 0.787 1.000 - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
13. DNAJC30 DNAJC30 47 1.757 0.931 - 0.826 - - - - - -
14. GMNC ENSDARG00000068719 28 1.747 - 0.747 - - - 1.000 - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
15. SPTBN4 ENSDARG00000092624 6 1.726 - - - - - 1.000 - - 0.726 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
16. CT573256.1 ENSDARG00000091657 18 1.722 0.981 - - - 0.741 - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
17. NINJ1 ENSDARG00000103663 43 1.717 - 1.000 - - - - - - 0.717 ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
18. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1.711 - 0.885 0.826 - - - - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
19. BX465203.1 ENSDARG00000113985 8 1.71 - - - - - 1.000 - - 0.710
20. dbpb ENSDARG00000057652, ENSDARG00000116703 71 1.673 0.931 - - - - 0.742 - - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
21. ptgis ENSDARG00000060094, ENSDARG00000113227 82 1.611 - 0.798 - - 0.813 - - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
22. si:ch211-250g4.3 ENSDARG00000092945 150 1.493 - 0.744 0.749 - - - - - - si:ch211-250g4.3 [Source:ZFIN;Acc:ZDB-GENE-060503-506]
23. si:ch211-126g16.8 3 1 - - - - - 1.000 - - - si:ch211-126g16.8, transcript variant X1
24. AL929092.2 AL929092.2 0 1 - - - - - 1.000 - - -
25. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
26. otx5 ENSDARG00000043483 282 1 - - - - - 1.000 - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
27. RBM11 ENSDARG00000090202 15 1 - - - - - 1.000 - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
28. si:dkey-71b5.3 ENSDARG00000095522 1 1 - 1.000 - - - - - - - si:dkey-71b5.3 [Source:ZFIN;Acc:ZDB-GENE-100922-91]
29. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - - - 1.000 - - -
30. gbp2 ENSDARG00000038669 91 1 - 1.000 - - - - - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
31. si:dkey-117n7.2 ENSDARG00000093135 40 1 - - - - - 1.000 - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
32. BX323448.1 ENSDARG00000116236 10 1 - 1.000 - - - - - - -
33. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - - - - 1.000 - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
34. si:dkey-40j3.1 si:dkey-40j3.1 1 1 - 1.000 - - - - - - -
35. DTX4_1 ENSDARG00000076302 31 1 - 1.000 - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
36. CR354382.1 CR354382.1 42 1 - 1.000 - - - - - - -
37. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - - - - 1.000 - - -
38. si:ch211-10m5.3 si:ch211-10m5.3 10 1 - 1.000 - - - - - - -
39. URB1_1 URB1_1 8 1 - 1.000 - - - - - - -
40. apba2b ENSDARG00000060639 2 1 - - - - - 1.000 - - - amyloid beta (A4) precursor protein-binding, family A, member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5371]
41. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - 1.000 - - - - - - -
42. ZBTB32 ENSDARG00000073726 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
43. CU302326.3 CU302326.3 6 1 - - - - - 1.000 - - -
44. cryba1l1 ENSDARG00000032929 1868 1 - - - - - 1.000 - - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
45. MEX3D MEX3D 293 1 - - - - - 1.000 - - -
46. kcne4 ENSDARG00000068257 13 1 - - - - - 1.000 - - - potassium voltage-gated channel, Isk-related family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050419-163]
47. si:dkey-4j21.1 17 1 - - - - - 1.000 - - - si:dkey-4j21.1, transcript variant X2
48. cx39.4 ENSDARG00000070357 17 1 - - - - - 1.000 - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
49. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - 1.000 - - - - - - -
50. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - 1.000 - - - - - - -
51. C3AR1 18 1 - 1.000 - - - - - - - C3a anaphylatoxin chemotactic receptor
52. or111-2 ENSDARG00000025658 2 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
53. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - 1.000 - - - - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
54. MTUS2 MTUS2 1 1 - 1.000 - - - - - - -
55. CCDC83 ENSDARG00000077179 29 1 - 1.000 - - - - - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
56. CABZ01111953.1 ENSDARG00000099747 38 1 - 1.000 - - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
57. btf3l4 ENSDARG00000089681 2 1 - - - - - 1.000 - - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
58. zgc:136254 ENSDARG00000068465 27 1 - - - - - 1.000 - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
59. IMPG2_1 IMPG2_1 2 1 - - - - - 1.000 - - -
60. ZNF423 ENSDARG00000059707 11 1 - 1.000 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
61. BX321870.1 ENSDARG00000098519 9 1 - - - - - 1.000 - - -
62. cdk20 ENSDARG00000003867 27 1 - - - - - 1.000 - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
63. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
64. si:dkey-220o21.2 si:dkey-220o21.2 19 1 - 1.000 - - - - - - -
65. cacna1f cacna1f 1 1 - - - - - 1.000 - - -
66. ft2 ENSDARG00000109567 5 1 - - - - - 1.000 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
67. tnni1b ENSDARG00000052708 478 1 - - - - - 1.000 - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
68. edil3 edil3 24 1 - 1.000 - - - - - - -
69. CR394546.1 ENSDARG00000077602 1 1 - 1.000 - - - - - - -
70. col5a3b ENSDARG00000101816 56 1 - - - - - 1.000 - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
71. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
72. mir199-2 mir199-2 38 1 - 1.000 - - - - - - -
73. zgc:171500 ENSDARG00000071553 2 1 - - - - - 1.000 - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
74. fabp10b ENSDARG00000091101 44 1 - - - - - 1.000 - - - fatty acid binding protein 10b, liver basic [Source:ZFIN;Acc:ZDB-GENE-100217-2]
75. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - 1.000 - - -
76. si:dkeyp-13d11.2 79 1 - - - - - 1.000 - - - si:dkeyp-13d11.2
77. fgf10b ENSDARG00000100475 17 1 - - - - - 1.000 - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
78. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 - - - - - 1.000 - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
79. BX321875.5_1 BX321875.5_1 0 1 - - - - - 1.000 - - -
80. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
81. si:dkey-257e4.2 si:dkey-257e4.2 0 1 - - - - - 1.000 - - -
82. CABZ01078124.1 CABZ01078124.1 4 1 - 1.000 - - - - - - -
83. ENSDARG00000006874 ENSDARG00000006874 3 1 - 1.000 - - - - - - -
84. esr2b ENSDARG00000034181 20 1 - - - - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
85. slc35g2a ENSDARG00000056262 52 1 - 1.000 - - - - - - - solute carrier family 35, member G2a [Source:ZFIN;Acc:ZDB-GENE-041114-202]
86. si:dkeyp-4f2.6 ENSDARG00000095596 3 1 - - - - - 1.000 - - - si:dkeyp-4f2.6 [Source:ZFIN;Acc:ZDB-GENE-110914-212]
87. SNORA14 SNORA14 10 1 - - - - - 1.000 - - -
88. pwwp2b ENSDARG00000101080 138 1 - - - - - 1.000 - - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]
89. gata2b ENSDARG00000009094 16 1 - - - - - 1.000 - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
90. CABZ01053592.1 ENSDARG00000117388 6 1 - - - - - 1.000 - - -
91. CALN1 ENSDARG00000088898 114 1 - - - - - 1.000 - - - calneuron 1 [Source:ZFIN;Acc:ZDB-GENE-130313-1]
92. C2CD4C C2CD4C 4 1 - 1.000 - - - - - - -
93. ABI3BP 2 1 - - - - - 1.000 - - - ABI family member 3 binding protein, transcript variant X3
94. BX323876.2 ENSDARG00000104577 62 1 - - - - - 1.000 - - -
95. si:ch73-74h11.1 ENSDARG00000062750 158 1 - - - - - 1.000 - - - si:ch73-74h11.1 [Source:ZFIN;Acc:ZDB-GENE-091204-215]
96. 5S_rRNA_3 5S_rRNA_3 1 1 - 1.000 - - - - - - -
97. prrg2 ENSDARG00000087193 15 1 - 1.000 - - - - - - - proline rich Gla (G-carboxyglutamic acid) 2 [Source:ZFIN;Acc:ZDB-GENE-130625-1]
98. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1 - - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
99. si:dkey-246j6.3 ENSDARG00000103497 2 1 - 1.000 - - - - - - - si:dkey-246j6.3 [Source:ZFIN;Acc:ZDB-GENE-110913-132]
100. BX682558.1 ENSDARG00000101975 30 1 - - - - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]

There are 915 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA