Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-114n24.7

Gene Name Gene ID Reads Annotation
si:ch211-114n24.7 si:ch211-114n24.7 2544










Genes with expression patterns similar to si:ch211-114n24.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-114n24.7 si:ch211-114n24.7 2544 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. srl ENSDARG00000104587 11126 5.232 0.826 0.941 0.740 0.814 - 0.979 0.932 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
3. prx ENSDARG00000017246 6183 5.106 0.869 0.846 0.754 0.712 - 0.988 0.937 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
4. hhatla ENSDARG00000039051 6598 5.069 0.868 0.904 0.810 0.831 0.748 - 0.908 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
5. EHBP1L1 EHBP1L1 2500 5.044 0.853 0.941 0.782 0.787 0.768 - 0.913 - -
6. eef2l2 ENSDARG00000035256 6815 5.012 0.864 0.835 0.782 0.872 - 0.929 0.730 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
7. pvalb4 ENSDARG00000024433 35736 4.93 0.821 - 0.784 0.870 0.819 0.736 0.900 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
8. SPEG SPEG 4017 4.906 0.808 - 0.739 0.754 0.727 0.997 0.881 - -
9. mybpc2b ENSDARG00000021265 9618 4.89 0.823 0.905 0.814 0.738 - 0.771 0.839 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
10. TMPO TMPO 3264 4.343 0.828 0.913 0.710 - - 0.991 0.901 - -
11. ryr3 ENSDARG00000071331 6795 4.298 0.869 0.923 0.854 0.770 - - 0.882 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
12. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.203 0.901 0.941 0.724 0.721 - - 0.916 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
13. trdn ENSDARG00000041779 4283 4.192 0.928 0.851 0.742 - 0.768 - 0.903 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
14. PTPLA PTPLA 4044 4.159 0.892 0.908 0.708 0.735 - - 0.916 - -
15. COL22A1 COL22A1 4473 4.158 0.882 0.873 0.724 - 0.736 - 0.943 - -
16. tpma ENSDARG00000033683 752432 4.119 0.843 - 0.880 0.839 0.777 - 0.780 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
17. NRAP ENSDARG00000009341 3565 4.087 0.793 0.849 0.783 0.749 - - 0.913 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
18. tnnt3a ENSDARG00000030270 112506 4.083 0.865 - 0.881 0.765 0.801 - 0.771 - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
19. actn3b ENSDARG00000001431 15747 4.072 0.874 0.925 0.779 0.775 0.719 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
20. casq1b ENSDARG00000018105 2643 4.066 0.795 0.858 - 0.725 0.764 - 0.924 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
21. atp2a1 ENSDARG00000020574 291561 4.06 0.841 - 0.860 0.835 0.812 - 0.712 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
22. sar1ab ENSDARG00000033320 3984 4.057 0.855 - 0.765 0.765 0.724 - 0.948 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
23. rtn2a ENSDARG00000016088 12184 4.055 0.888 - 0.768 0.722 0.721 - 0.956 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
24. cfl2 ENSDARG00000014106 8051 4.034 0.778 0.926 0.748 0.793 - - 0.789 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
25. CR847973.1 ENSDARG00000115516 8754 4.006 0.781 0.793 0.841 0.754 - - 0.837 - -
26. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 3.987 0.784 - 0.842 0.893 0.702 0.766 - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
27. pgam2 ENSDARG00000057571 23387 3.941 0.837 - 0.707 0.824 0.741 0.832 - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
28. mylz3 ENSDARG00000017441 303597 3.921 0.809 - 0.843 0.778 0.777 - 0.714 - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
29. si:ch211-156j16.1 ENSDARG00000092035 7441 3.501 0.838 - 0.757 - - 0.950 0.956 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
30. txlnbb ENSDARG00000076241 6396 3.5 0.850 0.940 - - 0.770 - 0.940 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
31. BX294434.1 ENSDARG00000061272 6493 3.483 0.838 0.921 0.784 - - - 0.940 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
32. MYOM1 MYOM1 3870 3.476 0.797 0.787 - - - 0.980 0.912 - -
33. hapln1a ENSDARG00000089769 12334 3.474 0.781 0.879 - - - 0.947 0.867 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
34. tgm2a ENSDARG00000070157 4516 3.467 0.906 - 0.833 - 0.839 - 0.889 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
35. alpk3a ENSDARG00000078989 1992 3.462 0.760 0.938 - - - - 0.877 0.887 - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
36. sgcd ENSDARG00000098573 4980 3.46 0.753 - 0.775 - - 0.990 0.942 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
37. pygma ENSDARG00000055518 15972 3.458 0.887 0.902 - - 0.764 - 0.905 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
38. znf106a ENSDARG00000016651 6049 3.44 0.900 0.883 - - 0.724 - 0.933 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
39. cap2 ENSDARG00000104478 3266 3.425 0.868 0.855 - 0.775 - - 0.927 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
40. ntmt1 ENSDARG00000022399 5779 3.409 0.852 0.928 - 0.708 - - 0.921 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
41. ryr1b ENSDARG00000023797 5693 3.398 - 0.924 0.762 0.805 - - 0.907 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
42. nexn ENSDARG00000057317 10972 3.382 0.923 - 0.772 0.757 - - 0.930 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
43. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.378 0.760 - 0.849 - 0.818 - 0.951 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
44. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.373 0.886 0.902 0.702 - - - 0.883 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
45. zgc:158296 ENSDARG00000070923 3935 3.362 - 0.873 0.821 0.702 - - 0.966 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
46. mylpfb ENSDARG00000002589 70167 3.348 - 0.879 0.874 0.797 0.798 - - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
47. cmya5 ENSDARG00000061379 1423 3.347 0.850 0.872 - 0.728 - - 0.897 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
48. myhz1.3 ENSDARG00000067997 155509 3.331 0.877 - 0.832 0.838 0.784 - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
49. vcl vcl 6667 3.327 0.888 0.922 0.813 - 0.704 - - - -
50. tnnt2d ENSDARG00000002988 7590 3.317 0.781 0.840 - 0.836 - - 0.860 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
51. trim55a ENSDARG00000029596 2858 3.315 0.833 0.903 - 0.734 - - 0.845 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
52. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 3.311 0.876 0.898 0.751 0.786 - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
53. casq2 ENSDARG00000008982 21802 3.309 0.865 - 0.756 0.882 0.806 - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
54. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.298 0.874 - 0.842 0.853 0.729 - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
55. CR354540.2 ENSDARG00000117517 18452 3.296 0.875 - 0.777 0.743 - - 0.901 - -
56. pbxip1a ENSDARG00000071015 4960 3.281 0.778 0.930 0.701 - - - 0.872 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
57. ckmb ENSDARG00000040565 505935 3.279 0.787 - 0.869 0.820 0.803 - - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
58. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 3.275 0.799 - 0.810 0.752 - - 0.914 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
59. desma ENSDARG00000058656 30292 3.267 0.865 - 0.849 0.778 0.775 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
60. PHB2 PHB2 3755 3.264 0.799 0.917 - - - 0.703 0.845 - -
61. znf648 ENSDARG00000104823 1918 3.262 0.706 0.863 0.778 - - - 0.915 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
62. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.248 0.783 - 0.814 0.813 0.838 - - - - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
63. zgc:92518 ENSDARG00000016343 3837 3.243 0.812 - 0.744 0.757 - - 0.930 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
64. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.211 0.826 0.775 - 0.733 - - 0.877 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
65. myoz2a ENSDARG00000012311 1373 3.211 0.764 0.813 0.760 - - - 0.874 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
66. acsl1 acsl1 4216 3.208 0.778 - 0.702 0.828 - - 0.900 - -
67. actc1b ENSDARG00000099197 324665 3.195 0.736 - 0.842 0.787 0.830 - - - - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
68. mdh1b ENSDARG00000018008 3196 3.192 0.824 0.726 - 0.700 - - 0.942 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
69. tnni2a.4 ENSDARG00000029069 122344 3.174 0.870 - 0.788 0.764 0.752 - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
70. ttnb ttnb 73721 3.169 0.714 - 0.849 0.836 0.770 - - - -
71. ptrfa ptrfa 4363 3.126 0.847 0.864 0.707 0.708 - - - - -
72. eno3 ENSDARG00000039007 11355 3.107 - 0.793 - 0.733 0.752 - 0.829 - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
73. pkmb ENSDARG00000099860 25094 3.106 0.828 - 0.734 - 0.785 - 0.759 - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
74. tmem38a ENSDARG00000024047 41883 3.106 0.850 - 0.816 0.718 0.722 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
75. txnipb ENSDARG00000070000 2365 3.098 0.712 0.812 - - - - 0.859 0.715 - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
76. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 3.085 0.794 0.819 - - - - 0.754 0.718 - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
77. aldoab ENSDARG00000034470 88942 3.07 0.827 - - 0.755 0.763 - 0.725 - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
78. METTL21C METTL21C 1717 3.037 0.723 - 0.779 0.709 - - 0.826 - -
79. zgc:153662 zgc:153662 4604 3.014 0.799 0.753 - - - 0.705 0.757 - -
80. ank1 ank1 5209 2.991 0.760 0.763 0.734 - 0.734 - - - -
81. klhl31 ENSDARG00000039066 13656 2.965 - - 0.776 0.722 0.708 - 0.759 - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
82. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.934 - 0.748 0.747 0.737 - - - - 0.702
83. sh3bgr ENSDARG00000021633 3498 2.725 0.858 0.914 - - - - 0.953 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
84. efemp2a ENSDARG00000094324 39261 2.708 0.822 - - - - 0.997 0.889 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
85. klhl40a ENSDARG00000039052 2537 2.699 0.846 0.940 - - - - 0.913 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
86. gypc ENSDARG00000041546 1487 2.691 0.834 0.905 - - - - 0.952 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
87. cbsa ENSDARG00000053500, ENSDARG00000112676 792 2.687 0.827 0.864 - - - 0.996 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
88. timm8b ENSDARG00000055708 7291 2.68 - 0.819 - - - 0.972 0.889 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
89. xirp2a ENSDARG00000071113 7113 2.67 0.842 0.870 - - - - 0.958 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
90. ITGB1BP2 ENSDARG00000030176 2472 2.662 0.840 0.892 - - - - 0.930 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
91. cacng1 cacng1 3118 2.658 0.880 0.895 - - - - 0.883 - -
92. sptb ENSDARG00000030490 7128 2.652 0.783 0.924 - - - - 0.945 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
93. mir133b_1 671 2.648 0.900 0.902 - - - - 0.846 - - microRNA 133b
94. chrnd ENSDARG00000019342 2728 2.645 0.826 0.931 - - - - 0.888 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
95. CCDC86 CCDC86 2023 2.639 0.764 0.882 - - - 0.993 - - -
96. myod1 ENSDARG00000030110 6019 2.638 0.805 0.895 - - - - 0.938 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
97. hspg2 ENSDARG00000076564 3440 2.629 0.805 0.921 - - - - 0.903 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
98. limch1a ENSDARG00000074275 2981 2.629 0.888 0.863 - - - - 0.878 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
99. murcb murcb 13655 2.622 0.880 - - 0.823 - - 0.919 - -
100. fitm1 ENSDARG00000056464 1759 2.621 0.762 0.944 - - - - 0.915 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]

There are 1672 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA