Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-114l13.3

Gene Name Gene ID Reads Annotation
si:ch211-114l13.3 ENSDARG00000094346 2 si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]










Genes with expression patterns similar to si:ch211-114l13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-114l13.3 ENSDARG00000094346 2 2 1.000 - - - - 1.000 - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
2. si:dkey-242e21.3 ENSDARG00000075723 77 2 1.000 - - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
3. glipr1b ENSDARG00000030078 73 1.966 1.000 - - - - 0.966 - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
4. MPV17L MPV17L 39 1.77 0.893 - - - - 0.877 - - -
5. sostdc1a ENSDARG00000068892 127 1.746 1.000 - - - - 0.746 - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
6. si:dkey-188k17.2 7 1.724 1.000 - - - - 0.724 - - - si:dkey-188k17.2
7. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.724 1.000 - - - - 0.724 - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
8. BRSK2 BRSK2 66 1.709 0.840 - - - - 0.869 - - -
9. STX3 ENSDARG00000051981 23 1.599 0.868 - - - - 0.731 - - - syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438]
10. RAB1B RAB1B 20 1 - - - - - 1.000 - - -
11. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
12. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
13. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1 - - - - - 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
14. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - 1.000 - - -
15. MDH1B ENSDARG00000018008 29 1 - - - - - 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
16. GRID1 GRID1 51 1 1.000 - - - - - - - -
17. SCN1B SCN1B 191 1 1.000 - - - - - - - -
18. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
19. C5HXorf57 C5HXorf57 4 1 1.000 - - - - - - - -
20. col17a1a ENSDARG00000069415 52 1 1.000 - - - - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
21. si:ch211-274k16.4 si:ch211-274k16.4 6 1 1.000 - - - - - - - -
22. myh6 ENSDARG00000090637 66 1 - - - - - 1.000 - - - myosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
23. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1 - - - - - 1.000 - - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
24. pcdh1g2 ENSDARG00000101232 5 1 - - - - - 1.000 - - - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
25. si:dkey-176g1.6 si:dkey-176g1.6 5 1 - - - - - 1.000 - - -
26. BX547934.1 ENSDARG00000097061 35 1 1.000 - - - - - - - -
27. si:dkey-111e8.5 ENSDARG00000093960 28 1 1.000 - - - - - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
28. mir196b ENSDARG00000081346 35 1 - - - - - 1.000 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
29. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1 - - - - - 1.000 - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
30. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
31. BX323793.4 BX323793.4 8 1 - - - - - 1.000 - - -
32. mirlet7f 1 1 - - - - - 1.000 - - - microRNA let7f
33. ttr ENSDARG00000037191 11 1 1.000 - - - - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
34. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - - - 1.000 - - -
35. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
36. cryba1l2 ENSDARG00000014803 47 1 - - - - - 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
37. CR936540.2 CR936540.2 4 1 - - - - - 1.000 - - -
38. CR383676.3_2 CR383676.3_2 9 1 - - - - - 1.000 - - -
39. GPR180 73 1 - - - - - 1.000 - - - G protein-coupled receptor 180, transcript variant X2
40. CR774199.1 CR774199.1 1 1 - - - - - 1.000 - - -
41. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
42. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - 1.000 - - -
43. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - 1.000 - - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
44. INSM2 ENSDARG00000020655 122 1 - - - - - 1.000 - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
45. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
46. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
47. CU929230.1 ENSDARG00000030665 48 1 - - - - - 1.000 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
48. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
49. WSCD1 ENSDARG00000098113 35 1 - - - - - 1.000 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
50. FAT1 FAT1 689 1 1.000 - - - - - - - -
51. angptl1 angptl1 82 1 1.000 - - - - - - - -
52. CU896555.1 CU896555.1 27 1 - - - - - 1.000 - - -
53. si:ch211-160d20.5 ENSDARG00000089627 2 1 - - - - - 1.000 - - - si:ch211-160d20.5 [Source:ZFIN;Acc:ZDB-GENE-050420-242]
54. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
55. BX511066.4 BX511066.4 6 1 1.000 - - - - - - - -
56. hbaa2 ENSDARG00000069735 10 1 1.000 - - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
57. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
58. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
59. agxtb ENSDARG00000018478 2 1 - - - - - 1.000 - - - alanine--glyoxylate and serine--pyruvate aminotransferase b [Source:ZFIN;Acc:ZDB-GENE-010302-3]
60. col17a1b ENSDARG00000079011 143 1 1.000 - - - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
61. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
62. si:dkey-217m5.3 si:dkey-217m5.3 22 1 - - - - - 1.000 - - -
63. pnx ENSDARG00000025899 25 1 1.000 - - - - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
64. ssh1b ENSDARG00000010031 4 1 - - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
65. SLC35A3_1 SLC35A3_1 35 1 - - - - - 1.000 - - -
66. smarcd3b ENSDARG00000019969 11 1 - - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
67. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
68. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - 1.000 - - -
69. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
70. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
71. zgc:173443 ENSDARG00000034403 26 1 - - - - - 1.000 - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
72. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
73. si:ch211-267j24.2 si:ch211-267j24.2 7 1 - - - - - 1.000 - - -
74. CU695006.2 CU695006.2 1 1 - - - - - 1.000 - - -
75. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 1.000 - - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
76. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
77. EDN3_1 EDN3_1 24 1 - - - - - 1.000 - - -
78. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
79. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
80. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
81. CU681842.2 CU681842.2 1 1 - - - - - 1.000 - - -
82. SOX8 SOX8 22 1 - - - - - 1.000 - - -
83. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - 1.000 - - - si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
84. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - - - - - 1.000 - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
85. ciita ENSDARG00000090851 5 1 - - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
86. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
87. si:dkey-47k16.4_1 ENSDARG00000113005 5 1 1.000 - - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
88. si:dkey-286j17.4 ENSDARG00000093402 1 1 - - - - - 1.000 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
89. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
90. KIAA0319 KIAA0319 2 1 - - - - - 1.000 - - -
91. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
92. gngt2b ENSDARG00000103543 132 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
93. LRRC61 ENSDARG00000077357 55 1 - - - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
94. BEGAIN BEGAIN 39 1 - - - - - 1.000 - - -
95. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
96. zgc:174680 ENSDARG00000100702 3 1 - - - - - 1.000 - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
97. rhoga ENSDARG00000068653 13 1 - - - - - 1.000 - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
98. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
99. ttc25 ENSDARG00000058140 2 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
100. ak7b ENSDARG00000017023 25 1 1.000 - - - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]

There are 318 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA