Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-114c12.2

Gene Name Gene ID Reads Annotation
si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]










Genes with expression patterns similar to si:ch211-114c12.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
2. vash2 ENSDARG00000007774 2537 1.98 - 0.995 - - - 0.985 - - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
3. gpc4 ENSDARG00000015472 2529 1.966 - 0.995 - - - - 0.971 - - glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]
4. ezra ENSDARG00000020944 3105 1.962 - 0.993 - - - 0.969 - - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
5. rbm4.2 ENSDARG00000055080 5241 1.954 - - - - - 0.977 0.977 - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
6. crb3b ENSDARG00000068182 683 1.94 - - - - - 0.986 0.954 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
7. CU019646.2 CU019646.2 519 1.939 - 0.995 - - - - 0.944 - -
8. tex2 ENSDARG00000078186 2467 1.938 - - - - - 0.991 0.947 - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
9. akr1b1 ENSDARG00000006215 2511 1.936 - 0.996 - - - - 0.940 - - aldo-keto reductase family 1, member B1 (aldose reductase) [Source:ZFIN;Acc:ZDB-GENE-040625-7]
10. tomm7 ENSDARG00000067717 4452 1.932 - - - - - 0.988 0.944 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
11. skp1 ENSDARG00000003151 8172 1.929 - 0.984 - - - - 0.945 - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
12. QPCT ENSDARG00000089717 1383 1.89 - - - - - 0.988 0.902 - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
13. pfdn1 ENSDARG00000014536 6969 1.888 - - - - - 0.986 0.902 - - prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
14. zgc:77439 ENSDARG00000039211 1492 1.874 - - - - - 0.983 0.891 - - zgc:77439 [Source:ZFIN;Acc:ZDB-GENE-031010-24]
15. eif4ebp3l ENSDARG00000041607 5257 1.864 - - - - - 0.986 0.878 - - eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
16. dlst ENSDARG00000014230, ENSDARG00000113407 6282 1.832 - 0.969 - - - - 0.863 - - dihydrolipoamide S-succinyltransferase [Source:ZFIN;Acc:ZDB-GENE-030326-1]
17. eif3s10 ENSDARG00000076815 10822 1.821 - 0.857 - - - - 0.964 - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
18. cyb5r3 ENSDARG00000005891 4440 1.782 - - - - - 0.851 0.931 - - cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
19. WDR1 ENSDARG00000114022 7532 1.77 - 0.899 - - - - 0.871 - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
20. wu:fk48d07 wu:fk48d07 13245 1.704 0.802 - - - - - 0.902 - -
21. ACVR1B ACVR1B 4824 1.696 - 0.996 - - - - - - 0.700
22. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.68 - - - - - - 0.948 - 0.732 RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
23. sepw2a 8597 1.667 0.745 - - - - - 0.922 - - selenoprotein W, 2a
24. ptp4a1 ENSDARG00000006242 10267 1.664 - - - - - 0.954 - - 0.710 protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
25. pleca ENSDARG00000062590 16794 1.659 - 0.940 - - - - 0.719 - - plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
26. ppib ENSDARG00000092798 21969 1.639 - - - - - 0.732 0.907 - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
27. rpa1 ENSDARG00000003938 4403 1.619 - 0.855 - - - - 0.764 - - replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
28. tmem63ba ENSDARG00000104559 11859 1.615 - 0.880 - - - - 0.735 - - transmembrane protein 63Ba [Source:ZFIN;Acc:ZDB-GENE-030131-4320]
29. sec61a1 ENSDARG00000021669 20408 1.61 - 0.895 - - - 0.715 - - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
30. EIF4G1 EIF4G1 19676 1.563 - 0.756 - - - - 0.807 - -
31. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.476 0.744 - - 0.732 - - - - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
32. psmb7 ENSDARG00000037962 11542 1.457 0.702 - - - - - - - 0.755 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
33. SCARF2 1117 0.997 - 0.997 - - - - - - - scavenger receptor class F, member 2
34. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.996 - 0.996 - - - - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
35. dnajb12b ENSDARG00000087473 3811 0.996 - 0.996 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
36. rrp1 ENSDARG00000103337 2366 0.996 - 0.996 - - - - - - - ribosomal RNA processing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9837]
37. uba5 ENSDARG00000063588 1260 0.996 - 0.996 - - - - - - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
38. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 0.996 - 0.996 - - - - - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
39. slc38a5a ENSDARG00000009901 2527 0.996 - 0.996 - - - - - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
40. cxxc5a ENSDARG00000078865 3447 0.996 - 0.996 - - - - - - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]
41. atraid ENSDARG00000043388 648 0.996 - 0.996 - - - - - - - all-trans retinoic acid-induced differentiation factor [Source:ZFIN;Acc:ZDB-GENE-040724-177]
42. PEAK1 ENSDARG00000079756 1330 0.996 - 0.996 - - - - - - - pseudopodium-enriched atypical kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100422-1]
43. wu:fc47e11 539 0.996 - 0.996 - - - - - - - wu:fc47e11
44. dnajc18 ENSDARG00000056005 8084 0.996 - 0.996 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
45. ENSDARG00000092971 ENSDARG00000092971 563 0.996 - 0.996 - - - - - - -
46. PRODH_1 PRODH_1 3400 0.996 - 0.996 - - - - - - -
47. wdr75 ENSDARG00000040730 1247 0.996 - 0.996 - - - - - - - WD repeat domain 75 [Source:ZFIN;Acc:ZDB-GENE-030616-5]
48. ccne2 ENSDARG00000098529 4695 0.996 - 0.996 - - - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
49. cdk16_1 ENSDARG00000032072 2031 0.996 - 0.996 - - - - - - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
50. gpatch1 ENSDARG00000033418 1349 0.996 - 0.996 - - - - - - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
51. zic2a ENSDARG00000015554 2860 0.995 - 0.995 - - - - - - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
52. agla ENSDARG00000103811 2856 0.995 - 0.995 - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
53. gprc5c ENSDARG00000100862 457 0.995 - 0.995 - - - - - - - G protein-coupled receptor, class C, group 5, member C [Source:ZFIN;Acc:ZDB-GENE-070928-27]
54. malt1a malt1a 903 0.995 - 0.995 - - - - - - -
55. TSPY2 TSPY2 1371 0.995 - 0.995 - - - - - - -
56. and3 ENSDARG00000056873 22650 0.995 - 0.995 - - - - - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
57. sipa1l2 ENSDARG00000061640 4545 0.995 - 0.995 - - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
58. CR847934.1 CR847934.1 2658 0.995 - 0.995 - - - - - - -
59. CR352249.1 ENSDARG00000114701 857 0.995 - 0.995 - - - - - - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
60. PLEKHG1 2100 0.995 - 0.995 - - - - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
61. tbl1x ENSDARG00000060438 1386 0.995 - 0.995 - - - - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
62. mettl16 ENSDARG00000055838 818 0.995 - 0.995 - - - - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
63. taf5 ENSDARG00000018325 1363 0.995 - 0.995 - - - - - - - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
64. nxn ENSDARG00000033978, ENSDARG00000115888 1683 0.995 - 0.995 - - - - - - - nucleoredoxin [Source:ZFIN;Acc:ZDB-GENE-050522-75]
65. arhgap1 ENSDARG00000024324 6904 0.995 - 0.995 - - - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
66. mboat7 ENSDARG00000033436 848 0.995 - 0.995 - - - - - - - membrane bound O-acyltransferase domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1516]
67. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 0.995 - 0.995 - - - - - - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
68. C4H12orf45 C4H12orf45 483 0.995 - 0.995 - - - - - - -
69. frem1a ENSDARG00000069473 1847 0.995 - 0.995 - - - - - - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
70. wasf3 wasf3 3287 0.995 - 0.995 - - - - - - -
71. lima1 lima1 4760 0.995 - 0.995 - - - - - - -
72. pard6b ENSDARG00000003865 990 0.995 - 0.995 - - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
73. C1H7orf55 C1H7orf55 2552 0.995 - 0.995 - - - - - - -
74. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 0.994 - 0.994 - - - - - - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
75. ZDHHC5 ZDHHC5 836 0.994 - 0.994 - - - - - - -
76. acsl3b ENSDARG00000014674 3748 0.994 - 0.994 - - - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
77. snrnp27 ENSDARG00000035625 9080 0.994 - 0.994 - - - - - - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
78. polr2d ENSDARG00000076509 3386 0.994 - 0.994 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
79. ebna1bp2 ENSDARG00000054980 4621 0.994 - 0.994 - - - - - - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
80. jph2 ENSDARG00000028625 6706 0.993 - 0.993 - - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
81. lonrf1l ENSDARG00000078567 1049 0.993 - 0.993 - - - - - - - LON peptidase N-terminal domain and ring finger 1, like [Source:ZFIN;Acc:ZDB-GENE-081104-397]
82. smo ENSDARG00000002952 6411 0.993 - 0.993 - - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
83. si:dkey-9i23.11 si:dkey-9i23.11 3818 0.993 - - - - - 0.993 - - -
84. tmx2b ENSDARG00000007786 3151 0.993 - - - - - 0.993 - - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
85. map1lc3b ENSDARG00000101127 3958 0.992 - - - - - 0.992 - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
86. dnajc5aa ENSDARG00000042948 2885 0.992 - 0.992 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
87. fgfr4 ENSDARG00000069105 3593 0.992 - - - - - 0.992 - - - fibroblast growth factor receptor 4 [Source:ZFIN;Acc:ZDB-GENE-980526-488]
88. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.992 - 0.992 - - - - - - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
89. ndufa9 ndufa9 8846 0.992 - 0.992 - - - - - - -
90. kif1b ENSDARG00000037020 2124 0.992 - - - - - 0.992 - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
91. meaf6 ENSDARG00000101216 6865 0.991 - - - - - 0.991 - - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
92. cry2a cry2a 2728 0.991 - - - - - 0.991 - - -
93. hoxb8a ENSDARG00000056027 6340 0.991 - 0.991 - - - - - - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
94. tp53inp1 ENSDARG00000028017 2184 0.991 - - - - - 0.991 - - - tumor protein p53 inducible nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-031018-3]
95. arfgef2 ENSDARG00000074702 1593 0.991 - 0.991 - - - - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
96. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.991 - - - - - 0.991 - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
97. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 0.991 - - - - - 0.991 - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
98. anxa11b ENSDARG00000002632 5132 0.991 - 0.991 - - - - - - - annexin A11b [Source:ZFIN;Acc:ZDB-GENE-030707-5]
99. glsb ENSDARG00000040705 1439 0.99 - - - - - 0.990 - - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
100. GOLM1 GOLM1 1845 0.99 - - - - - 0.990 - - -

There are 594 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA