Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-113p18.3

Gene Name Gene ID Reads Annotation
si:ch211-113p18.3 ENSDARG00000087835 377 si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]










Genes with expression patterns similar to si:ch211-113p18.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-113p18.3 ENSDARG00000087835 377 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
2. cetn3 ENSDARG00000011825 1087 2.618 - - - 0.864 - - 0.757 0.997 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
3. U3 U3 287 2.52 - - - 0.889 - 0.776 0.855 - -
4. iqsec2 iqsec2 304 2.495 - 0.835 - 0.929 - - 0.731 - -
5. si:dkey-238o13.4 ENSDARG00000078847 884 2.406 - - - - 0.701 0.735 - 0.970 - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
6. nexmifb ENSDARG00000029296 416 1.915 - - - 0.942 - - - 0.973 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
7. smcr8a ENSDARG00000052818 559 1.908 - - - - - - 0.915 0.993 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
8. mfsd5 ENSDARG00000015997 570 1.882 - - - 0.891 - - - 0.991 - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
9. abcb6b ENSDARG00000074254 600 1.866 - - - - - 0.872 - 0.994 - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
10. apopt1 ENSDARG00000092473 682 1.838 - - - 0.896 - - - 0.942 - apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
11. SPAG9 ENSDARG00000078142 629 1.837 - - - 0.844 - - - 0.993 - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
12. CABZ01043370.1 CABZ01043370.1 2013 1.835 - - - - - - 0.859 0.976 -
13. lig4 ENSDARG00000060620 369 1.824 - - - - - - 0.826 0.998 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
14. CASKIN2_1 CASKIN2_1 2299 1.818 - - - 0.826 - - - 0.992 -
15. C21H5orf15 C21H5orf15 2318 1.814 - - - - - - 0.855 0.959 -
16. ZNF70_2 ZNF70_2 1866 1.806 - - - - - - 0.816 0.990 -
17. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 1.798 - - - - - 0.946 0.852 - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
18. gltpd1 gltpd1 377 1.796 - - - 0.898 - - 0.898 - -
19. SEMA7A ENSDARG00000078707 465 1.78 - 0.893 - 0.887 - - - - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
20. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 1.769 - 0.780 - - - - - 0.989 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
21. zgc:112962 ENSDARG00000069102 431 1.761 - - - - - - 0.765 0.996 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
22. prp19 prp19 4804 1.757 - - - - - - 0.868 0.889 -
23. syne1b ENSDARG00000063068 786 1.75 - - - - - - 0.760 0.990 - spectrin repeat containing, nuclear envelope 1b [Source:ZFIN;Acc:ZDB-GENE-071218-4]
24. MPPED1 ENSDARG00000088181 117 1.746 - 0.876 - - - - 0.870 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
25. CABZ01044023.1 ENSDARG00000117734 240 1.742 - - - - - 0.896 0.846 - -
26. zgc:136254 ENSDARG00000068465 27 1.741 - 0.871 - - - - 0.870 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
27. ercc1 ENSDARG00000031680 900 1.74 - - - - - - 0.762 0.978 - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
28. kdm5bb ENSDARG00000003098 531 1.738 - 0.751 - - - - - 0.987 - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
29. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.738 - 0.853 - - - - 0.885 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
30. LPIN3 LPIN3 121 1.732 - 0.815 - - - 0.917 - - -
31. vps36 ENSDARG00000057021 636 1.732 - 0.737 - - - - - 0.995 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
32. tmem110 497 1.731 - - - - - 0.904 0.827 - - transmembrane protein 110
33. si:ch211-87m7.2 ENSDARG00000030129 223 1.727 - - - - - 0.885 0.842 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
34. tbx16 ENSDARG00000007329 255 1.715 - 0.795 - 0.920 - - - - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
35. DNAJB14 ENSDARG00000069996 144 1.715 - 0.893 - - - 0.822 - - - DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:ZFIN;Acc:ZDB-GENE-061110-138]
36. fam193a ENSDARG00000102787 617 1.715 - - - 0.817 - 0.898 - - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
37. NPBWR2 NPBWR2 132 1.715 - 0.822 - - - - 0.893 - -
38. asnsd1 830 1.705 - - - - - - 0.713 0.992 - asparagine synthetase domain containing 1, transcript variant X1
39. ZBTB11 ENSDARG00000017886 817 1.702 - 0.831 - - - - 0.871 - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
40. CABZ01069006.1 CABZ01069006.1 363 1.699 - 0.706 - - - - - 0.993 -
41. si:dkey-176f19.6 si:dkey-176f19.6 373 1.698 - 0.800 - - - - 0.898 - -
42. tmem127 ENSDARG00000030981 1389 1.697 - - - - - - 0.772 0.925 - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
43. eif4ba ENSDARG00000017439, ENSDARG00000117080 1882 1.692 - - - - - - 0.708 0.984 - eukaryotic translation initiation factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-060629-1]
44. OVOL1 75 1.691 - - - 0.763 - 0.928 - - - ovo-like zinc finger 1, transcript variant X1
45. NAT16 ENSDARG00000086222 4682 1.69 0.701 - - - - - - 0.989 - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
46. bend3 ENSDARG00000076903 320 1.683 0.774 - - 0.909 - - - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
47. FAM114A2 ENSDARG00000079508 1226 1.683 - - - - - - 0.758 0.925 - family with sequence similarity 114, member A2 [Source:ZFIN;Acc:ZDB-GENE-030131-6308]
48. CITED1 ENSDARG00000077769 692 1.681 - - - 0.732 - - - 0.949 - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
49. chic2 ENSDARG00000022690 184 1.677 - - - 0.912 - - 0.765 - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
50. tmem168a ENSDARG00000068705 498 1.677 - - - 0.844 - - 0.833 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
51. GAB2 ENSDARG00000105120 147 1.666 - - - 0.952 0.714 - - - - GRB2-associated binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-756]
52. txnl4a ENSDARG00000036190 2048 1.661 - 0.800 - - - - - 0.861 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
53. CABZ01073405.1 CABZ01073405.1 275 1.661 - - - - - 0.807 0.854 - -
54. CABZ01081749.1 CABZ01081749.1 637 1.657 - - - 0.851 - - 0.806 - -
55. si:ch211-130m23.2 ENSDARG00000095136 121 1.655 - - - - - 0.819 0.836 - - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
56. CCHCR1 CCHCR1 238 1.654 - - - 0.830 - 0.824 - - -
57. CABZ01024770.1 CABZ01024770.1 150 1.652 - - - - - 0.883 0.769 - -
58. efcab4a efcab4a 110 1.651 - - - - - 0.779 0.872 - -
59. KLHL30 ENSDARG00000076094 366 1.642 0.705 - - 0.937 - - - - - kelch-like family member 30 [Source:ZFIN;Acc:ZDB-GENE-100913-2]
60. zgc:153924 507 1.638 - - - 0.859 - - 0.779 - - zgc:153924
61. FBXO46 ENSDARG00000099814 722 1.638 - - - 0.847 - - 0.791 - - F-box protein 46 [Source:HGNC Symbol;Acc:HGNC:25069]
62. rfc5 ENSDARG00000035634 974 1.621 - - - - - 0.765 0.856 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
63. ATF6B 960 1.618 - - - 0.893 - 0.725 - - - activating transcription factor 6 beta
64. gnai2b ENSDARG00000017294 686 1.615 - 0.867 - - - - 0.748 - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
65. usf1 ENSDARG00000041689 1619 1.615 - - - - - - 0.878 0.737 - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
66. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 1.613 - - - - - - 0.807 0.806 - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
67. gle1 ENSDARG00000043559 1362 1.609 - - - - - - 0.758 0.851 - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
68. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 1.609 - - - 0.842 - - 0.767 - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
69. stk16 ENSDARG00000037777 255 1.608 - 0.748 - - - - 0.860 - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
70. POLDIP3 ENSDARG00000099375 832 1.601 - - - 0.702 - - 0.899 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]
71. si:ch211-207m11.3 si:ch211-207m11.3 401 1.601 - - - - - 0.712 0.889 - -
72. SCML2 ENSDARG00000012949 1310 1.599 - - - - - 0.715 - 0.884 - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
73. ppig ENSDARG00000044431 3427 1.595 - - - - - - 0.721 0.874 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
74. rbbp5 ENSDARG00000042147 702 1.583 - - - 0.800 - - 0.783 - - retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]
75. si:ch211-259i2.2 si:ch211-259i2.2 45 1.581 - - - - - 0.728 0.853 - -
76. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.58 - - - 0.827 - - 0.753 - - tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
77. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.576 - - - 0.794 - - 0.782 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
78. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.573 - - - 0.794 - - 0.779 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
79. csrnp2 ENSDARG00000075972 1650 1.573 - - - 0.795 - - - 0.778 - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
80. bmi1b ENSDARG00000013076 1020 1.569 - - - - - 0.816 0.753 - - bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
81. CLN5 ENSDARG00000076339 377 1.566 - 0.752 - - - 0.814 - - - CLN5, intracellular trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060908-1]
82. PDGFC ENSDARG00000077588 1064 1.563 - - - 0.799 - - 0.764 - - platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
83. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 1.548 - 0.841 - - - - 0.707 - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
84. prkacab ENSDARG00000016809 1441 1.516 - - - - - 0.773 0.743 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
85. HOMEZ HOMEZ 1824 1.511 - - - - - 0.755 0.756 - -
86. pcnxl3 pcnxl3 756 1.51 - - - - - 0.808 0.702 - -
87. ppdpfa ENSDARG00000007682 3214 1.509 - - - 0.801 - - 0.708 - - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
88. pdxkb ENSDARG00000036546 721 1.503 - - - - - 0.789 0.714 - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
89. manf ENSDARG00000063177, ENSDARG00000114083 570 1.501 - 0.779 - - - 0.722 - - - mesencephalic astrocyte-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-060929-640]
90. haus5 ENSDARG00000019156 681 1.5 - - - 0.755 - - 0.745 - - HAUS augmin-like complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-041114-150]
91. tfcp2 ENSDARG00000060306 1024 1.489 - 0.743 - - - - 0.746 - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
92. PTP4A2 PTP4A2 185 1.486 - 0.713 - - - 0.773 - - -
93. zc3h7b 2936 1.481 - - - - - 0.744 0.737 - - zinc finger CCCH-type containing 7B
94. pfkma ENSDARG00000014179 1293 1.48 - 0.758 - - 0.722 - - - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
95. fkbp2 ENSDARG00000044540 1615 1.478 - - - 0.756 - - - 0.722 - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
96. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.457 - - - - - 0.748 0.709 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
97. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 1.437 0.711 0.726 - - - - - - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
98. mul1b ENSDARG00000052527 431 0.998 - - - - - - - 0.998 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
99. l3mbtl1a ENSDARG00000014828 119 0.998 - - - - - - - 0.998 - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
100. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.998 - - - - - - - 0.998 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]

There are 1896 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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