Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-113e8.11

Gene Name Gene ID Reads Annotation
si:ch211-113e8.11 ENSDARG00000076585 721 si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]










Genes with expression patterns similar to si:ch211-113e8.11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-113e8.11 ENSDARG00000076585 721 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
2. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.305 - 0.797 - 0.795 - - - - 0.713 zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
3. usp42 ENSDARG00000077300 926 2.261 - - - 0.771 - 0.701 0.789 - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
4. LDLRAD4 LDLRAD4 1237 1.898 - - - 0.915 - - - 0.983 -
5. sgsm3 ENSDARG00000019038 352 1.882 - - - - - - 0.894 0.988 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
6. eef1a1a ENSDARG00000039502 234 1.879 - - - 0.890 - - - 0.989 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
7. wdr47a ENSDARG00000078136 522 1.858 - - - - - - 0.867 0.991 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
8. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 1.841 - - - 0.849 - - - 0.992 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
9. ube2z ENSDARG00000029215 1059 1.832 - - - 0.869 - - - 0.963 - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
10. sh3bp5a ENSDARG00000100529 642 1.793 - - - - - - 0.804 0.989 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
11. FBXL3 FBXL3 1769 1.788 - - - 0.849 - - - 0.939 -
12. smc4 ENSDARG00000038882 4373 1.776 - - - - - - 0.834 0.942 - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
13. mapre3b ENSDARG00000102878 362 1.773 - - - - - - 0.786 0.987 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
14. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.765 - - - 0.791 - - - 0.974 - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
15. klc2 3058 1.747 - - - 0.800 - - - 0.947 - kinesin light chain 2
16. CABZ01073424.1 ENSDARG00000107858 688 1.74 - - - 0.751 - - - 0.989 -
17. mfap1 ENSDARG00000018241 833 1.739 - - - 0.796 - - - 0.943 - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
18. gipc1 ENSDARG00000104483 2913 1.718 - - - 0.748 - - - 0.970 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
19. TDG TDG 1191 1.708 - - - 0.728 - - - 0.980 -
20. irf2a ENSDARG00000007387 915 1.702 - - - 0.711 - - - 0.991 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
21. rapgef5a ENSDARG00000075271 282 1.7 - - - 0.894 - - 0.806 - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
22. plk4 ENSDARG00000004576 688 1.699 - 0.709 - - - - - 0.990 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
23. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.685 - - - 0.712 - - - 0.973 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
24. hif1an ENSDARG00000031915 2098 1.616 - - - 0.867 - 0.749 - - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
25. max ENSDARG00000024844 6035 1.612 - - - 0.763 - - - 0.849 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
26. maf1 ENSDARG00000013122 3365 1.611 - - - 0.706 - - - 0.905 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
27. fam3c ENSDARG00000056152 3833 1.605 - - - 0.820 - - - 0.785 - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
28. rtn1b ENSDARG00000021143 1682 1.595 - 0.814 - 0.781 - - - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
29. dnaja2l ENSDARG00000010745 2367 1.593 - - - - - - 0.737 0.856 - DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
30. cflara ENSDARG00000055966 464 1.586 - - - 0.799 - - 0.787 - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
31. aftpha ENSDARG00000069249 867 1.585 - - - 0.858 - - 0.727 - - aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
32. rybpa ENSDARG00000037773 904 1.585 0.742 - - 0.843 - - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
33. C19H7orf41 C19H7orf41 2243 1.582 - 0.790 - 0.792 - - - - -
34. Sep-03 Sep-03 1124 1.56 - 0.752 - - - - - 0.808 -
35. smcr7b smcr7b 690 1.547 - - - 0.831 - - 0.716 - -
36. gpm6bb ENSDARG00000001676 2005 1.542 - - - 0.814 - - 0.728 - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
37. cand1 ENSDARG00000017841 8164 1.523 - - - 0.759 - - 0.764 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
38. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.523 - - - 0.821 - - - - 0.702 ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
39. TBC1D24 ENSDARG00000069339 1300 1.515 - - - 0.745 - - 0.770 - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
40. si:dkey-117m1.4 ENSDARG00000093120 1666 1.496 - - - 0.709 - - 0.787 - - si:dkey-117m1.4 [Source:ZFIN;Acc:ZDB-GENE-090313-177]
41. babam1 ENSDARG00000077526 776 1.493 - - - 0.789 - - 0.704 - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
42. ankfy1 ENSDARG00000061013, ENSDARG00000111387 952 1.491 0.708 - - 0.783 - - - - - ankyrin repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041222-1]
43. sin3ab ENSDARG00000059812 2140 1.487 - - - 0.739 - - 0.748 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
44. prkci ENSDARG00000021225 2472 1.485 - - - 0.759 - - - - 0.726 protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
45. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.475 - - - 0.775 - - - - 0.700 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
46. cwc22 ENSDARG00000014008 2385 1.44 - - - - - - 0.727 0.713 - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
47. rrm1 ENSDARG00000014017 7296 1.425 - 0.707 - - - - - 0.718 - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
48. ift20 ENSDARG00000040556 285 0.992 - - - - - - - 0.992 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
49. psmd5 ENSDARG00000059046 622 0.992 - - - - - - - 0.992 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
50. brd1a ENSDARG00000013596, ENSDARG00000116694 547 0.99 - - - - - - - 0.990 - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
51. SB:CB827 SB:CB827 245 0.99 - - - - - - - 0.990 -
52. lrrc4.2 ENSDARG00000003020 235 0.99 - - - - - - - 0.990 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
53. map7d2b ENSDARG00000045316 702 0.99 - - - - - - - 0.990 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
54. rapgef1a ENSDARG00000043593 416 0.99 - - - - - - - 0.990 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
55. PRRT2 ENSDARG00000103588 913 0.99 - - - - - - - 0.990 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
56. CR354611.2 CR354611.2 2040 0.99 - - - - - - - 0.990 -
57. anapc5 ENSDARG00000008461 434 0.99 - - - - - - - 0.990 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
58. MANEAL ENSDARG00000056450 262 0.99 - - - - - - - 0.990 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
59. zgc:171727 ENSDARG00000105781 350 0.99 - - - - - - - 0.990 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
60. ppp1r8 ppp1r8 310 0.99 - - - - - - - 0.990 -
61. bsk146 ENSDARG00000099069 274 0.99 - - - - - - - 0.990 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
62. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.99 - - - - - - - 0.990 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
63. SBNO2 SBNO2 773 0.99 - - - - - - - 0.990 -
64. TTC28 ENSDARG00000114920 580 0.99 - - - - - - - 0.990 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
65. wdr92 ENSDARG00000037334 329 0.99 - - - - - - - 0.990 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
66. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.99 - - - - - - - 0.990 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
67. grna ENSDARG00000004954 189 0.989 - - - - - - - 0.989 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
68. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.989 - - - - - - - 0.989 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
69. chd5 ENSDARG00000105083 132 0.989 - - - - - - - 0.989 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
70. pcdh10b ENSDARG00000102824 732 0.989 - - - - - - - 0.989 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
71. SIPA1L3 ENSDARG00000061699 268 0.989 - - - - - - - 0.989 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
72. KIRREL3 ENSDARG00000115903 206 0.989 - - - - - - - 0.989 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
73. tchp ENSDARG00000035605 1695 0.989 - - - - - - - 0.989 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
74. ZNF784_2 ZNF784_2 181 0.989 - - - - - - - 0.989 -
75. xkr6 xkr6 286 0.989 - - - - - - - 0.989 -
76. DEDD ENSDARG00000029783 530 0.989 - - - - - - - 0.989 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
77. fstl5 ENSDARG00000040198 213 0.989 - - - - - - - 0.989 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
78. E2F1 ENSDARG00000103868 638 0.989 - - - - - - - 0.989 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
79. BX322612.1 BX322612.1 236 0.989 - - - - - - - 0.989 -
80. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.989 - - - - - - - 0.989 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
81. XKR7 ENSDARG00000026333 175 0.989 - - - - - - - 0.989 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
82. epb41a ENSDARG00000099283 860 0.988 - - - - - - - 0.988 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
83. cetn2 ENSDARG00000101510 541 0.988 - - - - - - - 0.988 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
84. THEM4 ENSDARG00000061621 364 0.988 - - - - - - - 0.988 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
85. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.988 - - - - - - - 0.988 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
86. fzd3b ENSDARG00000058692 627 0.988 - - - - - - - 0.988 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
87. pold3 ENSDARG00000076169 694 0.988 - - - - - - - 0.988 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
88. nkain4 ENSDARG00000062699 377 0.987 - - - - - - - 0.987 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
89. RBM33 RBM33 1954 0.987 - - - - - - - 0.987 -
90. B3GNT1 B3GNT1 601 0.987 - - - - - - - 0.987 -
91. MDFIC ENSDARG00000074223 781 0.987 - - - - - - - 0.987 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
92. ryk ENSDARG00000007231 1611 0.987 - - - - - - - 0.987 - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
93. DVL3 1098 0.987 - - - - - - - 0.987 - dishevelled segment polarity protein 3
94. GANAB_1 GANAB_1 685 0.987 - - - - - - - 0.987 -
95. ghitm 1443 0.987 - - - - - - - 0.987 - growth hormone inducible transmembrane protein
96. LTN1 ENSDARG00000003984 1076 0.986 - - - - - - - 0.986 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
97. tnika ENSDARG00000056218 728 0.986 - - - - - - - 0.986 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
98. LPL_1 LPL_1 1150 0.986 - - - - - - - 0.986 -
99. si:ch211-195b13.1 ENSDARG00000016623 427 0.986 - - - - - - - 0.986 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
100. ezh1 ENSDARG00000037894 294 0.986 - - - - - - - 0.986 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]

There are 1279 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA