Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-113a14.23

Gene Name Gene ID Reads Annotation
si:ch211-113a14.23 si:ch211-113a14.23 2










Genes with expression patterns similar to si:ch211-113a14.23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-113a14.23 si:ch211-113a14.23 2 2 - - - - 1.000 - - 1.000 -
2. pdgfb pdgfb 5 1.718 - - - - 0.931 - - 0.787 -
3. tmc1 23 1 - - - - 1.000 - - - - transmembrane channel-like 1, transcript variant X1
4. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - - - - 1.000 - - - -
5. si:dkey-106c17.2 ENSDARG00000094994, ENSDARG00000098530 14 1 - - - - - - - 1.000 - si:dkey-106c17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-612]
6. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - 1.000 - - - -
7. gria3b ENSDARG00000037498, ENSDARG00000111839 2 0.981 - - - - 0.981 - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
8. rbfox3l rbfox3l 34 0.975 - - - - 0.975 - - - -
9. tnr ENSDARG00000020771 20 0.968 - - - - 0.968 - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
10. si:ch211-173p18.3_1 ENSDARG00000035821 36 0.954 - - - - 0.954 - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
11. klf5b ENSDARG00000062106 7 0.945 - - - - 0.945 - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
12. uprt ENSDARG00000035549, ENSDARG00000110518 2 0.931 - - - - 0.931 - - - - uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2411]
13. eva1c ENSDARG00000056024 1 0.931 - - - - 0.931 - - - - eva-1 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-091204-329]
14. si:dkeyp-69b9.6 ENSDARG00000014825 5 0.931 - - - - 0.931 - - - - si:dkeyp-69b9.6 [Source:ZFIN;Acc:ZDB-GENE-100922-227]
15. si:dkey-46d17.4 si:dkey-46d17.4 1 0.931 - - - - 0.931 - - - -
16. mbnl3 ENSDARG00000016085 6 0.931 - - - - 0.931 - - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
17. si:dkey-88j15.4 ENSDARG00000079471 3 0.931 - - - - 0.931 - - - - si:dkey-88j15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-55]
18. si:ch211-285c6.4 ENSDARG00000095410 4 0.931 - - - - 0.931 - - - - si:ch211-285c6.4 [Source:ZFIN;Acc:ZDB-GENE-041001-97]
19. ftr19_1 ENSDARG00000094131 1 0.931 - - - - 0.931 - - - - finTRIM family, member 19 [Source:ZFIN;Acc:ZDB-GENE-090506-5]
20. dyrk1aa ENSDARG00000063570 14 0.931 - - - - 0.931 - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a [Source:ZFIN;Acc:ZDB-GENE-050302-29]
21. THEG ENSDARG00000078644 121 0.931 - - - - 0.931 - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
22. CABZ01117519.1 CABZ01117519.1 1 0.931 - - - - 0.931 - - - -
23. CR848787.1 CR848787.1 2 0.931 - - - - 0.931 - - - -
24. MYADM_1 ENSDARG00000086815 1 0.931 - - - - 0.931 - - - - myeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]
25. allc ENSDARG00000042562 12 0.931 - - - - 0.931 - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
26. si:busm1-228j01.5 si:busm1-228j01.5 9 0.931 - - - - 0.931 - - - -
27. fermt3b ENSDARG00000030938 17 0.931 - - - - 0.931 - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
28. tusc3 ENSDARG00000078854 4 0.931 - - - - 0.931 - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
29. cbln10 ENSDARG00000023157 17 0.931 - - - - 0.931 - - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
30. si:ch211-113a14.17 15 0.931 - - - - 0.931 - - - - si:ch211-113a14.17
31. iqsec3b ENSDARG00000093091 10 0.931 - - - - 0.931 - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
32. zgc:165453 ENSDARG00000078183 3 0.931 - - - - 0.931 - - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
33. atf1 ENSDARG00000044301, ENSDARG00000109865 2 0.931 - - - - 0.931 - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
34. CR382283.2 CR382283.2 1 0.931 - - - - 0.931 - - - -
35. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 0.931 - - - - 0.931 - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
36. CR385046.7 CR385046.7 1 0.931 - - - - 0.931 - - - -
37. dolk ENSDARG00000076991 7 0.931 - - - - 0.931 - - - - dolichol kinase [Source:ZFIN;Acc:ZDB-GENE-070410-59]
38. rhobtb2b ENSDARG00000089340 4 0.931 - - - - 0.931 - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
39. pth1b ENSDARG00000091961, ENSDARG00000115353 5 0.931 - - - - 0.931 - - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
40. SPTBN4 ENSDARG00000092624 6 0.931 - - - - 0.931 - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
41. CABZ01055343.1 CABZ01055343.1 12 0.931 - - - - 0.931 - - - -
42. si:ch211-53m15.2 ENSDARG00000094928 1 0.931 - - - - 0.931 - - - - si:ch211-53m15.2 [Source:ZFIN;Acc:ZDB-GENE-100922-24]
43. CD97_2 CD97_2 15 0.931 - - - - 0.931 - - - -
44. aglb ENSDARG00000100352 22 0.931 - - - - 0.931 - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
45. ninj2 ENSDARG00000079824 1 0.931 - - - - 0.931 - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
46. zgc:171516 zgc:171516 5 0.931 - - - - 0.931 - - - -
47. si:ch211-139k8.3 si:ch211-139k8.3 1 0.931 - - - - 0.931 - - - -
48. LGALS3BP LGALS3BP 51 0.931 - - - - 0.931 - - - -
49. BX004993.1 BX004993.1 1 0.931 - - - - 0.931 - - - -
50. RBBP6_11 RBBP6_11 6 0.931 - - - - 0.931 - - - -
51. pex11b ENSDARG00000069147 1 0.931 - - - - 0.931 - - - - peroxisomal biogenesis factor 11 beta [Source:ZFIN;Acc:ZDB-GENE-060825-289]
52. mtp 1 0.931 - - - - 0.931 - - - - microsomal triglyceride transfer protein
53. cx27.5 ENSDARG00000035553 12 0.916 - - - - 0.916 - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
54. rhcgb ENSDARG00000100265 4 0.916 - - - - 0.916 - - - - Rh family, C glycoprotein b [Source:ZFIN;Acc:ZDB-GENE-040426-2595]
55. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 0.916 - - - - 0.916 - - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
56. si:ch73-176g19.2 si:ch73-176g19.2 2 0.91 - - - - 0.910 - - - -
57. gdf10a ENSDARG00000095378 12 0.91 - - - - - - - 0.910 - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
58. tap1 ENSDARG00000079766 75 0.905 - - - - 0.905 - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
59. irak1 ENSDARG00000025949 19 0.903 - - - - 0.903 - - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
60. pcsk9 ENSDARG00000074185 8 0.903 - - - - 0.903 - - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]
61. AL935296.1 AL935296.1 4 0.898 - - - - 0.898 - - - -
62. si:ch211-89f22.1 si:ch211-89f22.1 11 0.898 - - - - 0.898 - - - -
63. ctskl ctskl 17 0.89 - - - - 0.890 - - - -
64. CABZ01073740.1 CABZ01073740.1 27 0.889 - - - - 0.889 - - - -
65. CUZD1_3 CUZD1_3 9 0.885 - - - - - - - 0.885 -
66. hcn3 ENSDARG00000027192 6 0.884 - - - - 0.884 - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
67. zgc:158417 ENSDARG00000101671 46 0.881 - - - - 0.881 - - - - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
68. htr3a ENSDARG00000089212 51 0.881 - - - - 0.881 - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
69. prkacbb ENSDARG00000059125 7 0.881 - - - - 0.881 - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
70. PLCXD1_2 PLCXD1_2 9 0.881 - - - - 0.881 - - - -
71. TOP1 ENSDARG00000086775 48 0.881 - - - - 0.881 - - - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
72. adcy1b ENSDARG00000088634 44 0.881 - - - - 0.881 - - - - adenylate cyclase 1b [Source:ZFIN;Acc:ZDB-GENE-100805-1]
73. lrrc9 ENSDARG00000054352 25 0.879 - - - - 0.879 - - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
74. agfg1a ENSDARG00000030020 6 0.873 - - - - 0.873 - - - - ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
75. fosb ENSDARG00000055751 170 0.866 - - - - - - - 0.866 - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
76. gpr183 gpr183 25 0.858 - - - - 0.858 - - - -
77. irf8 ENSDARG00000056407 85 0.855 - - - - 0.855 - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
78. CACNA1E 18 0.849 - - - - 0.849 - - - - calcium voltage-gated channel subunit alpha1 E, transcript variant X6
79. CREB3L3 CREB3L3 24 0.849 - - - - 0.849 - - - -
80. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 0.846 - - - - 0.846 - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
81. CR854899.1 ENSDARG00000102357 8 0.846 - - - - 0.846 - - - -
82. hoxa1a ENSDARG00000104307 29 0.83 - - - - 0.830 - - - - homeobox A1a [Source:ZFIN;Acc:ZDB-GENE-000823-5]
83. CABZ01087853.1 CABZ01087853.1 3 0.83 - - - - 0.830 - - - -
84. EPB41L2 ENSDARG00000093374 7 0.829 - - - - 0.829 - - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
85. ADORA3 ENSDARG00000059899 5 0.829 - - - - 0.829 - - - - adenosine A3 receptor [Source:HGNC Symbol;Acc:HGNC:268]
86. l3mbtl3 ENSDARG00000025983 12 0.829 - - - - 0.829 - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
87. gnat2 ENSDARG00000042529 112 0.828 - - - - 0.828 - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
88. si:dkey-150k17.3 33 0.819 - - - - 0.819 - - - - si:dkey-150k17.3
89. GPR141 9 0.816 - - - - 0.816 - - - - G protein-coupled receptor 141
90. ccdc41 ccdc41 97 0.813 - - - - 0.813 - - - -
91. sergef ENSDARG00000070986, ENSDARG00000111782 48 0.798 - - - - 0.798 - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
92. BX088691.1 BX088691.1 9 0.798 - - - - 0.798 - - - -
93. si:dkeyp-20e4.3 si:dkeyp-20e4.3 68 0.796 - - - - 0.796 - - - -
94. BEGAIN_1 BEGAIN_1 7 0.787 - - - - - - - 0.787 -
95. si:ch211-199i18.8 si:ch211-199i18.8 4 0.787 - - - - - - - 0.787 -
96. treh ENSDARG00000077911 9 0.787 - - - - - - - 0.787 - trehalase (brush-border membrane glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-070912-84]
97. si:ch211-14a17.10 ENSDARG00000076534 12 0.787 - - - - - - - 0.787 - si:ch211-14a17.10 [Source:ZFIN;Acc:ZDB-GENE-030616-581]
98. mpp4a ENSDARG00000058222 2 0.787 - - - - - - - 0.787 - membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4) [Source:ZFIN;Acc:ZDB-GENE-070912-523]
99. gabbr1a ENSDARG00000018967 2 0.787 - - - - - - - 0.787 - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
100. appa ENSDARG00000104279 4 0.787 - - - - - - - 0.787 - amyloid beta (A4) precursor protein a [Source:ZFIN;Acc:ZDB-GENE-000616-13]

There are 36 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA