Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-113a14.19_2

Gene Name Gene ID Reads Annotation
si:ch211-113a14.19_2 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 17 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]










Genes with expression patterns similar to si:ch211-113a14.19_2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-113a14.19_2 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 17 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
2. 5S_rRNA_17 5S_rRNA_17 4 1.857 - - - - 0.905 - - - 0.952
3. si:dkey-85n7.8 ENSDARG00000095793 31 1.649 - - 0.749 - 0.900 - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
4. CU928217.1 CU928217.1 12 1.641 0.802 - - - 0.839 - - - -
5. si:dkey-33o22.1 ENSDARG00000087639 21 1.637 - 0.827 - 0.810 - - - - - si:dkey-33o22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-221]
6. si:dkey-27i16.2 ENSDARG00000098293 48 1.637 0.802 - - - 0.835 - - - - si:dkey-27i16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9667]
7. GTF3A GTF3A 6 1.62 0.802 - - - - - - 0.818 -
8. CABZ01055343.4 CABZ01055343.4 9 1.62 - - - 0.917 - - - - 0.703
9. hsd3b1 ENSDARG00000069926 35 1.613 0.802 - - - - - - 0.811 - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
10. ahdc1 ENSDARG00000093453 233 1.58 0.802 0.778 - - - - - - - AT hook, DNA binding motif, containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-584]
11. ARHGEF40 ENSDARG00000078979 25 1.48 - 0.750 - - - - - 0.730 - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
12. sema7a ENSDARG00000078707 70 1.474 - 0.748 - - - - - 0.726 - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
13. pcdh1b ENSDARG00000036175 101 1.424 - - - 0.721 0.703 - - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
14. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 1 - - - 1.000 - - - - -
15. zgc:171750 ENSDARG00000078638 4 1 - - - 1.000 - - - - - zgc:171750 [Source:ZFIN;Acc:ZDB-GENE-071004-30]
16. zgc:173737 ENSDARG00000058299 6 1 - - - - - - - 1.000 - zgc:173737 [Source:ZFIN;Acc:ZDB-GENE-071004-109]
17. GPR142 ENSDARG00000102491 2 1 - - - 1.000 - - - - - G protein-coupled receptor 142 [Source:ZFIN;Acc:ZDB-GENE-130603-30]
18. BX469910.2 ENSDARG00000096127 6 1 - - - 1.000 - - - - -
19. si:dkey-58j15.10 ENSDARG00000096515 1 1 - - - 1.000 - - - - - si:dkey-58j15.10 [Source:ZFIN;Acc:ZDB-GENE-100922-196]
20. KIF21B ENSDARG00000009733 53 1 - - - 1.000 - - - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
21. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 1 1.000 - - - - - - - - SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
22. polk ENSDARG00000059963 5 1 - - - 1.000 - - - - - polymerase (DNA directed) kappa [Source:ZFIN;Acc:ZDB-GENE-060526-137]
23. CU633988.1 CU633988.1 97 1 1.000 - - - - - - - -
24. zgc:162592 ENSDARG00000101787 5 1 - - - 1.000 - - - - - zgc:162592 [Source:ZFIN;Acc:ZDB-GENE-030131-5400]
25. fhl2b ENSDARG00000003991 32 1 1.000 - - - - - - - - four and a half LIM domains 2b [Source:ZFIN;Acc:ZDB-GENE-041010-121]
26. Telomerase-vert Telomerase-vert 8 1 - - - 1.000 - - - - -
27. bcmo1b bcmo1b 1 1 - - - 1.000 - - - - -
28. KCNJ12_1 KCNJ12_1 14 1 - - - 1.000 - - - - -
29. oard1 ENSDARG00000057426, ENSDARG00000110693 42 1 1.000 - - - - - - - - O-acyl-ADP-ribose deacylase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-480]
30. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - - - 1.000 - - - - -
31. vcpip1 ENSDARG00000060177 56 1 1.000 - - - - - - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
32. CR936967.1 CR936967.1 2 1 - - - 1.000 - - - - -
33. slc22a4 ENSDARG00000005335 3 1 - - - 1.000 - - - - - solute carrier family 22 (organic cation/zwitterion transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1517]
34. rab11bb_1 ENSDARG00000090086 7 1 1.000 - - - - - - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
35. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 1 1.000 - - - - - - - - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
36. ptger4a ENSDARG00000059236 13 1 1.000 - - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
37. nxpe3 ENSDARG00000061690 60 1 1.000 - - - - - - - - neurexophilin and PC-esterase domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-061013-214]
38. TMEM220 ENSDARG00000088981 28 1 - - - 1.000 - - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
39. FHDC1 ENSDARG00000074812 2 1 - - - - - - - 1.000 - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
40. BX088525.2 ENSDARG00000117222 11 1 - - - 1.000 - - - - -
41. sdhaf1 ENSDARG00000092478 51 0.989 - - - - - - - - 0.989 succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
42. CLDND1_1 CLDND1_1 50 0.959 0.959 - - - - - - - -
43. ptx3b ENSDARG00000079515 10 0.959 0.959 - - - - - - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
44. CU570691.1 ENSDARG00000088908 5 0.952 - - - - - - - - 0.952
45. CABZ01066439.2 CABZ01066439.2 5 0.952 - - - - - - - - 0.952
46. BX324215.1 BX324215.1 2 0.952 - - - - - - - - 0.952
47. ankmy1 ENSDARG00000062702 52 0.952 - - - - - - - - 0.952 ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
48. pparab ENSDARG00000054323 2 0.952 - - - - - - - - 0.952 peroxisome proliferator-activated receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-211]
49. ATP13A5 ATP13A5 13 0.952 - - - - - - - - 0.952
50. edn3b ENSDARG00000086669 8 0.952 - - - - - - - - 0.952 endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
51. MFN1_1 ENSDARG00000011884 2 0.952 - - - - - - - - 0.952 mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
52. ALOX5_2 ALOX5_2 6 0.952 - - - - - - - - 0.952
53. U6_1 U6_1 2 0.952 - - - - - - - - 0.952
54. aqp3b ENSDARG00000069518 80 0.951 - - - 0.951 - - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
55. lgalslb ENSDARG00000055525 18 0.948 - - - - 0.948 - - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
56. casz1 ENSDARG00000037030 85 0.946 0.946 - - - - - - - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
57. AL935181.2 AL935181.2 9 0.944 - - - - - - - - 0.944
58. zgc:162235 zgc:162235 9 0.942 - - - - - - - - 0.942
59. ANGPT2 ANGPT2 2 0.94 - - - - - - - - 0.940
60. klc1a ENSDARG00000009796 10 0.937 - - - 0.937 - - - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
61. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 0.937 - - - 0.937 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
62. si:dkeyp-69c1.7 ENSDARG00000087165 31 0.937 - - - 0.937 - - - - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
63. si:ch211-267e7.22 si:ch211-267e7.22 34 0.929 - - - 0.929 - - - - -
64. ccr6a ENSDARG00000087474 10 0.928 - - - - - - - - 0.928 chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
65. irx2a ENSDARG00000001785 262 0.921 0.921 - - - - - - - - iroquois homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1446]
66. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 0.92 - - - - - - - - 0.920 si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
67. TMEM27 TMEM27 261 0.916 0.916 - - - - - - - -
68. stc1l ENSDARG00000058476 512 0.914 - - - - - - - - 0.914 stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
69. si:ch1073-185p12.2 ENSDARG00000100199 7 0.908 - - - - - - - - 0.908 si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
70. si:dkey-9p20.24 si:dkey-9p20.24 4 0.908 - - - - 0.908 - - - -
71. BX248410.2 ENSDARG00000090277 4 0.907 - - - - - - - - 0.907 sialic acid-binding Ig-like lectin 7 [Source:NCBI gene;Acc:103910452]
72. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 0.905 - - - - 0.905 - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
73. OTOS ENSDARG00000108475 180 0.901 - - - 0.901 - - - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
74. USP43 USP43 14 0.899 - - - - 0.899 - - - -
75. si:ch211-213i16.4 8 0.898 - - - - 0.898 - - - - si:ch211-213i16.4, transcript variant X1
76. pcbp3 ENSDARG00000054378 74 0.897 - - - - 0.897 - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
77. esr2b ENSDARG00000034181 20 0.895 - - 0.895 - - - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
78. CR385054.1_1 ENSDARG00000100106 43 0.894 - - - - 0.894 - - - -
79. rrad ENSDARG00000052011, ENSDARG00000112434 70 0.894 - - - - 0.894 - - - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
80. SNORD30 SNORD30 34 0.894 - - - - 0.894 - - - -
81. GPR156 ENSDARG00000086215 126 0.893 - - 0.893 - - - - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
82. si:ch211-199i18.8 si:ch211-199i18.8 4 0.893 - - - 0.893 - - - - -
83. disp2 ENSDARG00000042846 53 0.892 - - - - 0.892 - - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
84. zgc:172282 ENSDARG00000105059 64 0.891 - - - - 0.891 - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
85. HABP4 HABP4 33 0.891 - - - - 0.891 - - - -
86. palmda ENSDARG00000001913 26 0.89 - - - - 0.890 - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
87. plekho1b ENSDARG00000077499 21 0.89 - - - - 0.890 - - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
88. si:ch211-62a1.3 ENSDARG00000112419 8 0.89 - - - - 0.890 - - - - si:ch211-62a1.3 [Source:ZFIN;Acc:ZDB-GENE-061207-41]
89. sult1st6 ENSDARG00000006811 31 0.89 - - - - 0.890 - - - - sulfotransferase family 1, cytosolic sulfotransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040718-343]
90. itgb3b ENSDARG00000045070 4 0.89 - - - - 0.890 - - - - integrin beta 3b [Source:ZFIN;Acc:ZDB-GENE-071207-2]
91. dlg5b dlg5b 3 0.89 - - - - 0.890 - - - -
92. ighv2-3 ENSDARG00000096376 2 0.89 - - - - 0.890 - - - - immunoglobulin heavy variable 2-3 [Source:ZFIN;Acc:ZDB-GENE-040514-3]
93. si:dkey-264b2.3 19 0.89 - - - - 0.890 - - - - si:dkey-264b2.3, transcript variant X2
94. kcnk1b ENSDARG00000017254 2 0.89 - - - - 0.890 - - - - potassium channel, subfamily K, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-78]
95. U1_37 U1_37 2 0.89 - - - - 0.890 - - - -
96. si:dkey-15h19.3 si:dkey-15h19.3 5 0.89 - - - - 0.890 - - - -
97. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 0.89 - - - - 0.890 - - - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
98. KAZN_1 KAZN_1 13 0.89 - - - - 0.890 - - - -
99. XAF1 ENSDARG00000068939 12 0.89 - - - - 0.890 - - - - XIAP associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-060929-840]
100. si:dkey-18a10.3 ENSDARG00000090814 2 0.89 - - - - 0.890 - - - - si:dkey-18a10.3 [Source:ZFIN;Acc:ZDB-GENE-091204-174]

There are 492 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA