Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-113a14.19_1

Gene Name Gene ID Reads Annotation
si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]










Genes with expression patterns similar to si:ch211-113a14.19_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
2. CABZ01056274.1 CABZ01056274.1 3 2 - 1.000 - - - - - - 1.000
3. scn1a 8 2 - 1.000 - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
4. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 2 - 1.000 - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
5. BX072576.1 ENSDARG00000078204 12 2 - 1.000 - 1.000 - - - - - beta-2 adrenergic receptor-like [Source:NCBI gene;Acc:101885642]
6. si:dkey-93m18.5 si:dkey-93m18.5 2 1.983 - - - - 0.983 - - - 1.000
7. si:dkey-274m14.3 si:dkey-274m14.3 7 1.939 - - - 0.939 - - - - 1.000
8. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1.928 - 1.000 - - 0.928 - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
9. TRMT12 ENSDARG00000060338 58 1.91 0.910 1.000 - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
10. CABZ01054405.2 CABZ01054405.2 46 1.91 0.910 1.000 - - - - - - -
11. ccdc33 ENSDARG00000051858 11 1.91 0.910 1.000 - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
12. si:dkey-53f14.2 si:dkey-53f14.2 4 1.91 0.910 1.000 - - - - - - -
13. atad1b ENSDARG00000056609 40 1.91 0.910 1.000 - - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
14. CABZ01112732.1 ENSDARG00000068453 4 1.91 0.910 - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
15. si:ch211-121a2.4 ENSDARG00000028541 40 1.759 - 1.000 0.759 - - - - - - si:ch211-121a2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-23]
16. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.757 - 1.000 - 0.757 - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
17. ARHGEF40 ENSDARG00000078979 25 1.723 - 0.798 - 0.925 - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
18. TRIM14_9 TRIM14_9 5 1.714 - 0.714 - 1.000 - - - - -
19. PDE9A_1 PDE9A_1 1 1.709 - 1.000 - - - - - 0.709 -
20. BX546499.1 ENSDARG00000092602 1 1.709 - - - - - - - 0.709 1.000
21. XKR8 XKR8 9 1.632 0.910 - - - - - - 0.722 -
22. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1.625 0.910 - - - - - - - 0.715 gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
23. si:ch73-60p2.1 si:ch73-60p2.1 21 1.435 0.710 0.725 - - - - - - -
24. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
25. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
26. zgc:113343 ENSDARG00000103196 2 1 - 1.000 - - - - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
27. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
28. hs6st3b ENSDARG00000069500 5 1 - 1.000 - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
29. si:ch211-207c6.7 si:ch211-207c6.7 8 1 - 1.000 - - - - - - -
30. si:dkey-83m22.8 si:dkey-83m22.8 1 1 - 1.000 - - - - - - -
31. TRIM35_7 TRIM35_7 22 1 - 1.000 - - - - - - -
32. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
33. KIF9 ENSDARG00000031693 11 1 - 1.000 - - - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
34. AL935272.2 AL935272.2 37 1 - 1.000 - - - - - - -
35. MEI1 MEI1 2 1 - - - - - - - - 1.000
36. KLHL29 ENSDARG00000087688 1 1 - 1.000 - - - - - - - kelch-like family member 29 [Source:ZFIN;Acc:ZDB-GENE-121114-1]
37. wu:fb63c12 26 1 - 1.000 - - - - - - - wu:fb63c12
38. GPT GPT 2 1 - - - - - - - - 1.000
39. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - 1.000 - - - - - - -
40. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
41. foxg1b ENSDARG00000032705 354 1 - 1.000 - - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
42. DLGAP2 DLGAP2 36 1 - 1.000 - - - - - - -
43. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
44. nr5a1b ENSDARG00000023362 54 1 - 1.000 - - - - - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
45. pcsk7 ENSDARG00000069968 5 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
46. si:dkey-207j16.8 si:dkey-207j16.8 0 1 - 1.000 - - - - - - -
47. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
48. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - 1.000 - - - - - - -
49. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
50. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - 1.000 - - - - - - -
51. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
52. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
53. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - 1.000 - - - - - - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
54. cyp27a1.4 ENSDARG00000055159 47 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
55. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
56. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - - - 1.000
57. KIFC2 KIFC2 5 1 - - - 1.000 - - - - -
58. si:dkey-43b14.6 si:dkey-43b14.6 20 1 - 1.000 - - - - - - -
59. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
60. TFR2 ENSDARG00000103727 1 1 - 1.000 - - - - - - - transferrin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041220-3]
61. KCNAB3 KCNAB3 134 1 - 1.000 - - - - - - -
62. si:ch1073-76a20.1 si:ch1073-76a20.1 0 1 - 1.000 - - - - - - -
63. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
64. si:ch73-44m9.2 ENSDARG00000094821 101 1 1.000 - - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
65. dhrs13l1 ENSDARG00000098746 102 1 - 1.000 - - - - - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
66. tusc3 ENSDARG00000078854 4 1 - - - - - - - - 1.000 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
67. TTC40 TTC40 1 1 - 1.000 - - - - - - -
68. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
69. ankrd1b ENSDARG00000076192 204 1 - 1.000 - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
70. dclk3 ENSDARG00000078997 2 1 - 1.000 - - - - - - - doublecortin-like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-224]
71. ptx3b ENSDARG00000079515 10 1 - 1.000 - - - - - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
72. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
73. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 - 1.000 - - - - - - -
74. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
75. pou3f2a ENSDARG00000070220 817 1 - 1.000 - - - - - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
76. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
77. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - 1.000 - - - - - - -
78. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
79. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - 1.000 - - - - - - -
80. C9H17orf105 C9H17orf105 29 1 - 1.000 - - - - - - -
81. grin2cb ENSDARG00000077560 9 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
82. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
83. NAT14 ENSDARG00000115349 21 1 - - - 1.000 - - - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
84. svopa ENSDARG00000056833 14 1 - 1.000 - - - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
85. CCDC66 2 1 - - - - - - - - 1.000 coiled-coil domain containing 66
86. pmelb ENSDARG00000033760 206 1 - 1.000 - - - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
87. TRIM35 TRIM35 100 1 - 1.000 - - - - - - -
88. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
89. pole2 ENSDARG00000100028 42 1 - 1.000 - - - - - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
90. CABZ01069020.1 ENSDARG00000105806 19 1 - 1.000 - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
91. ccna2 ENSDARG00000011094 4 1 - 1.000 - - - - - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
92. GGT5 GGT5 1 1 - - - - - - - - 1.000
93. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - - - - - 1.000
94. PRODH PRODH 13 1 - 1.000 - - - - - - -
95. BX004964.1 ENSDARG00000097134 1 1 - 1.000 - - - - - - -
96. C14H5orf45 C14H5orf45 83 1 - 1.000 - - - - - - -
97. si:ch211-233f11.5 ENSDARG00000044061 2 1 - - - 1.000 - - - - - si:ch211-233f11.5 [Source:ZFIN;Acc:ZDB-GENE-131127-239]
98. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
99. pwwp2b ENSDARG00000101080 138 1 - 1.000 - - - - - - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]
100. H2AFX ENSDARG00000029406 242 1 - - - 1.000 - - - - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]

There are 824 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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