Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-113a14.15_1

Gene Name Gene ID Reads Annotation
si:ch211-113a14.15_1 2 si:ch211-113a14.15










Genes with expression patterns similar to si:ch211-113a14.15_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-113a14.15_1 2 5 - 1.000 1.000 - - 1.000 1.000 1.000 - si:ch211-113a14.15
2. si:ch211-218c6.9 si:ch211-218c6.9 40 2 - 1.000 - - - 1.000 - - -
3. sox17 ENSDARG00000101717 11 2 - 1.000 - - - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
4. zgc:110434 21 2 - 1.000 - - - 1.000 - - - zgc:110434
5. BX571969.1 BX571969.1 8 2 - - - - - 1.000 - 1.000 -
6. sdhaf1 ENSDARG00000092478 51 2 - 1.000 - - - 1.000 - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
7. si:ch211-122l14.7 ENSDARG00000095576 5 2 - 1.000 - - - 1.000 - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
8. spo11 ENSDARG00000013837 7 2 - - - - - - 1.000 1.000 - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
9. SNORA81_1 SNORA81_1 8 2 - 1.000 - - - - 1.000 - -
10. si:ch211-198c19.1 ENSDARG00000089333 3 2 - 1.000 - - - 1.000 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
11. TMC2 TMC2 5 2 - 1.000 - - - 1.000 - - -
12. hbaa2 ENSDARG00000069735 10 2 - - - - - 1.000 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
13. camk1db ENSDARG00000017446 47 1.959 - 1.000 - - - 0.959 - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
14. AL935293.1 AL935293.1 2 1.928 - - 0.928 - - - - 1.000 -
15. BX004785.2 ENSDARG00000093487 10 1.928 - - 0.928 - - - - 1.000 -
16. PHYH ENSDARG00000086740 15 1.928 - 1.000 0.928 - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
17. ACTR3_1 ACTR3_1 2 1.928 - 1.000 0.928 - - - - - -
18. cyp2j20 ENSDARG00000094057 44 1.883 - 1.000 - - - 0.883 - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
19. PPFIBP1 PPFIBP1 46 1.881 - 0.881 - - - 1.000 - - -
20. ms4a17a.1 ENSDARG00000043798 7 1.88 - - - - - - 0.880 1.000 - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
21. lmx1a ENSDARG00000020354 111 1.859 - 1.000 - - - 0.859 - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
22. NTRK3 NTRK3 163 1.854 - 1.000 - - - 0.854 - - -
23. si:dkey-19f21.8 si:dkey-19f21.8 12 1.836 - 1.000 - - - - 0.836 - -
24. FAM184A ENSDARG00000014081 34 1.836 - 1.000 - - - - 0.836 - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
25. arhgef19 ENSDARG00000078853 17 1.822 - - 0.822 - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
26. plek2 ENSDARG00000012789 102 1.611 - 0.856 0.755 - - - - - - pleckstrin 2 [Source:ZFIN;Acc:ZDB-GENE-080219-2]
27. BX664752.1 BX664752.1 64 1.597 - - - - - 0.879 0.718 - -
28. prkaa2 ENSDARG00000060641 12 1.566 - - - - - 0.768 0.798 - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]
29. cdk20 ENSDARG00000003867 27 1 - 1.000 - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
30. DKK3 DKK3 12 1 - 1.000 - - - - - - -
31. ABCA7 ABCA7 12 1 - 1.000 - - - - - - -
32. aste1 5 1 - - - - - - - 1.000 - asteroid homolog 1 (Drosophila)
33. si:dkey-29f21.5 si:dkey-29f21.5 3 1 - - - - - 1.000 - - -
34. ifit2 ifit2 11 1 - 1.000 - - - - - - -
35. ptpn20 ENSDARG00000075459 1 1 - - - - - 1.000 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
36. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
37. CABZ01058107.1 ENSDARG00000112826 8 1 - - - - - - - 1.000 - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
38. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - 1.000 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
39. si:ch211-265m20.8 120 1 - 1.000 - - - - - - - si:ch211-265m20.8, transcript variant X1
40. U1_54 U1_54 0 1 - - - - - 1.000 - - -
41. mthfd2l ENSDARG00000054199 25 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
42. BX469915.2 BX469915.2 48 1 - 1.000 - - - - - - -
43. pak1_1 ENSDARG00000103959 28 1 - - - - - 1.000 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
44. FETUB ENSDARG00000053973 4 1 - - - - - - - 1.000 - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
45. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - - - - - - 1.000 -
46. si:dkeyp-35e5.10 ENSDARG00000107425 8 1 - - - - - - - 1.000 - si:dkeyp-35e5.10 [Source:ZFIN;Acc:ZDB-GENE-110913-63]
47. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
48. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - 1.000 - -
49. CABZ01073334.1 CABZ01073334.1 1 1 - 1.000 - - - - - - -
50. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - - 1.000 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
51. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
52. def6b ENSDARG00000044524 99 1 - 1.000 - - - - - - - differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
53. aven ENSDARG00000002894 49 1 - - - - - 1.000 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
54. mir10b-2 116 1 - - - - - - 1.000 - - microRNA 10b-2
55. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 - - - - - - - 1.000 - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
56. si:rp71-17i16.7 si:rp71-17i16.7 0 1 - 1.000 - - - - - - -
57. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - - - 1.000 - - -
58. INTU ENSDARG00000077639 158 1 - 1.000 - - - - - - - inturned planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-110914-91]
59. CU138503.3 CU138503.3 31 1 - 1.000 - - - - - - -
60. ankrd37 ENSDARG00000056376 131 1 - 1.000 - - - - - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
61. C10H5orf63 C10H5orf63 17 1 - 1.000 - - - - - - -
62. ENSDARG00000086666 ENSDARG00000086666 2159 1 - - - - - 1.000 - - -
63. CABZ01054405.1 CABZ01054405.1 115 1 - 1.000 - - - - - - -
64. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
65. sst2 ENSDARG00000014190 617 1 - 1.000 - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
66. si:dkey-93h22.6 si:dkey-93h22.6 7 1 - 1.000 - - - - - - -
67. HELZ2_2 ENSDARG00000012600 5 1 - - - - - - - 1.000 - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
68. cthrc1b ENSDARG00000001971 44 1 - - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
69. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
70. ENSDARG00000091099 ENSDARG00000091099 5 1 - - - - - - 1.000 - -
71. tlr1 ENSDARG00000100649 2 1 - - - - - 1.000 - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
72. CABZ01084273.1 CABZ01084273.1 16 1 - 1.000 - - - - - - -
73. gfra3 ENSDARG00000087704 122 1 - 1.000 - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
74. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
75. si:ch211-214p16.1 ENSDARG00000044129 64 1 - 1.000 - - - - - - - si:ch211-214p16.1 [Source:NCBI gene;Acc:368901]
76. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - 1.000 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
77. SNORA63 SNORA63 7 1 - - - - - - 1.000 - -
78. cyp17a2 ENSDARG00000053966 1 1 - 1.000 - - - - - - - cytochrome P450, family 17, subfamily A, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-100822-1]
79. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
80. HTRA2_6 HTRA2_6 0 1 - - - - - - 1.000 - -
81. opn3 ENSDARG00000052775 8 1 - - - - - - - 1.000 - opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16]
82. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - 1.000 - - - - - - -
83. CR391967.1 CR391967.1 135 1 - 1.000 - - - - - - -
84. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
85. pcdh2ab7 7 1 - 1.000 - - - - - - - protocadherin 2 alpha b 7
86. CLDN20 26 1 - 1.000 - - - - - - - claudin 20, transcript variant X2
87. mir184 48 1 - 1.000 - - - - - - - microRNA 184
88. hspb15 ENSDARG00000078411 6 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b15 [Source:ZFIN;Acc:ZDB-GENE-080214-5]
89. CU469532.1 CU469532.1 31 1 - - - - - - 1.000 - -
90. zgc:66455 ENSDARG00000052375 3 1 - - - - - - 1.000 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
91. fam219b ENSDARG00000104637 3 1 - - - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
92. CU570987.1 CU570987.1 7 1 - 1.000 - - - - - - -
93. tekt1 ENSDARG00000101331 27 1 - 1.000 - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
94. si:ch211-122l24.4 si:ch211-122l24.4 41 1 - 1.000 - - - - - - -
95. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 - - - - - - - 1.000 - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
96. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - - 1.000 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
97. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - - - - - 1.000 - - -
98. AL928685.1 ENSDARG00000095786 0 1 - - - - - 1.000 - - -
99. KCNJ12 KCNJ12 17 1 - - - - - 1.000 - - -
100. CU695006.1 CU695006.1 4 1 - 1.000 - - - - - - -

There are 908 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA