Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-113a14.12

Gene Name Gene ID Reads Annotation
si:ch211-113a14.12 ENSDARG00000077456 1004 si:ch211-113a14.12 [Source:ZFIN;Acc:ZDB-GENE-121214-99]










Genes with expression patterns similar to si:ch211-113a14.12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-113a14.12 ENSDARG00000077456 1004 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-113a14.12 [Source:ZFIN;Acc:ZDB-GENE-121214-99]
2. chek2 ENSDARG00000025820, ENSDARG00000115597 77 1.78 - - - - - 0.850 0.930 - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
3. otx2 766 1.751 - - - - - - 0.989 - 0.762 orthodenticle homeobox 2, transcript variant X2
4. tnfaip6 ENSDARG00000093440, ENSDARG00000111060 91 1.729 - - - - - 0.751 0.978 - - tumor necrosis factor, alpha-induced protein 6 [Source:ZFIN;Acc:ZDB-GENE-060421-2654]
5. mia2 ENSDARG00000099973 139 1.703 - - - - - 0.770 0.933 - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
6. cnstb ENSDARG00000042759 105 1.689 - - - - - 0.758 0.931 - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
7. nr2c2ap ENSDARG00000056162 368 1.684 - - - - - 0.830 0.854 - - nuclear receptor 2C2-associated protein [Source:ZFIN;Acc:ZDB-GENE-050208-758]
8. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1.673 - - - - - 0.705 0.968 - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
9. slc38a6 ENSDARG00000054312 112 1.666 - - - - - 0.750 0.916 - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
10. itsn2b ENSDARG00000054973, ENSDARG00000110296 1255 1.627 - - - - - 0.733 0.894 - - intersectin 2b [Source:ZFIN;Acc:ZDB-GENE-050309-102]
11. HSBP1 HSBP1 158 1.623 - - - - - 0.703 0.920 - -
12. CT956064.5 CT956064.5 619 1.602 - - - - - 0.736 0.866 - -
13. chic2 ENSDARG00000022690 184 1.589 - - - - - 0.737 0.852 - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
14. SAYSD1 SAYSD1 149 1.575 - - - - - 0.797 0.778 - -
15. tox ENSDARG00000032317 9126 1.571 0.772 - - - - - - - 0.799 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
16. CDPF1 ENSDARG00000095705 553 1.569 - 0.750 - - - - 0.819 - - cysteine rich DPF motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33710]
17. ssh2a ENSDARG00000088440 1149 1.569 - 0.738 - - - - 0.831 - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
18. zgc:77486 ENSDARG00000013711, ENSDARG00000093978, ENSDARG00000111468, ENSDARG00000116962 139 1.557 0.706 - - - - - 0.851 - - zgc:77486 [Source:ZFIN;Acc:ZDB-GENE-040426-2056]
19. tmem168a ENSDARG00000068705 498 1.556 - - - - - 0.717 0.839 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
20. sf3a1 ENSDARG00000041887 6702 1.553 - - - - - - 0.848 - 0.705 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
21. FBXL7 ENSDARG00000062251 179 1.541 - - - - - 0.738 0.803 - - F-box and leucine-rich repeat protein 7 [Source:ZFIN;Acc:ZDB-GENE-061215-122]
22. CABZ01028287.1 CABZ01028287.1 626 1.54 0.760 - - - - - - - 0.780
23. znf516 ENSDARG00000070809 65 1.527 0.781 - - - - 0.746 - - - zinc finger protein 516 [Source:ZFIN;Acc:ZDB-GENE-060503-194]
24. CR762436.1 ENSDARG00000112375 636 1.525 - - 0.722 - - - - - 0.803 Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
25. nhlh2 ENSDARG00000025495 1860 1.518 0.773 - - - - - - - 0.745 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
26. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.517 - - - - - 0.737 0.780 - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
27. HIST1H4J_1 HIST1H4J_1 4066 1.509 0.735 - - - - - - - 0.774
28. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.495 0.708 - - - - - - - 0.787 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
29. HIST1H4C HIST1H4C 6190 1.488 0.740 - - - - - - - 0.748
30. mtm1 ENSDARG00000037560 1086 1.466 - - - - - 0.715 0.751 - - myotubularin 1 [Source:ZFIN;Acc:ZDB-GENE-051113-128]
31. htatip htatip 1553 1.459 - - - - - - 0.736 - 0.723
32. fam58a 423 1.449 0.721 - - - - 0.728 - - - family with sequence similarity 58, member A, transcript variant X1
33. ezh2 ENSDARG00000010571 3273 1.445 0.713 - - - - - - - 0.732 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
34. gpm6bb ENSDARG00000001676 2005 1.425 0.719 - - - - - - - 0.706 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
35. hace1 ENSDARG00000062280 556 1.42 - - - - - 0.700 0.720 - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-110411-52]
36. CU681846.1 CU681846.1 86 0.997 - - - - - - 0.997 - -
37. si:rp71-3c13.3 si:rp71-3c13.3 128 0.997 - - - - - - 0.997 - -
38. TRHDE_1 TRHDE_1 102 0.996 - - - - - - 0.996 - -
39. ENSDARG00000091446 ENSDARG00000091446 239 0.995 - - - - - - 0.995 - -
40. SLC38A9 ENSDARG00000032769 35 0.995 - - - - - - 0.995 - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
41. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.995 - - - - - - 0.995 - -
42. MPPED1 ENSDARG00000088181 117 0.995 - - - - - - 0.995 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
43. ctgfb ENSDARG00000104292 69 0.995 - - - - - - 0.995 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
44. spsb3a ENSDARG00000077737 527 0.995 - - - - - - 0.995 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
45. LAMC2 ENSDARG00000068288 37 0.995 - - - - - - 0.995 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
46. trim62 ENSDARG00000060901 12 0.995 - - - - - - 0.995 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
47. zgc:136254 ENSDARG00000068465 27 0.995 - - - - - - 0.995 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
48. si:ch211-117l17.4 ENSDARG00000103534 24 0.995 - - - - - - 0.995 - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
49. ttr ENSDARG00000037191 11 0.995 - - - - - - 0.995 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
50. TTBK1 TTBK1 120 0.995 - - - - - - 0.995 - -
51. BICD2_1 BICD2_1 18 0.995 - - - - - - 0.995 - -
52. si:busm1-180g5.7 si:busm1-180g5.7 15 0.995 - - - - - - 0.995 - -
53. VWA5A_1 VWA5A_1 6 0.995 - - - - - - 0.995 - -
54. guca1c ENSDARG00000030758 9 0.995 - - - - - - 0.995 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
55. KBTBD13 ENSDARG00000076449 10 0.994 - - - - - - 0.994 - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
56. adck1 ENSDARG00000062561 22 0.994 - - - - - - 0.994 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
57. si:ch211-284o19.8 ENSDARG00000053836 43 0.994 - - - - - - 0.994 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
58. prkcba ENSDARG00000008723, ENSDARG00000116813 30 0.994 - - - - - - 0.994 - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
59. si:ch211-174j14.2 ENSDARG00000093015 111 0.993 - - - - - - 0.993 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
60. fubp3 ENSDARG00000086896 21 0.993 - - - - - - 0.993 - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
61. tnfb ENSDARG00000013598 94 0.993 - - - - - - 0.993 - - tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]
62. kcnh6 kcnh6 59 0.993 - - - - - - 0.993 - -
63. pign ENSDARG00000077532 123 0.993 - - - - - - 0.993 - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
64. fpgt ENSDARG00000042139 155 0.993 - - - - - - 0.993 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
65. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.992 - - - - - - 0.992 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
66. si:dkey-16n15.3 223 0.992 - - - - - - 0.992 - - si:dkey-16n15.3
67. CR790368.1 ENSDARG00000100936 20 0.992 - - - - - - 0.992 - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
68. si:dkey-240h12.4 ENSDARG00000034210 114 0.992 - - - - - - 0.992 - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
69. cdadc1 ENSDARG00000036650 16 0.991 - - - - - - 0.991 - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
70. si:ch211-135f11.1 166 0.991 - - - - - - 0.991 - - si:ch211-135f11.1, transcript variant X3
71. lpar6b ENSDARG00000069441 65 0.991 - - - - - - 0.991 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
72. ccrl1a ccrl1a 40 0.99 - - - - - - 0.990 - -
73. CABZ01048373.1 CABZ01048373.1 81 0.99 - - - - - - 0.990 - -
74. ca8 ENSDARG00000039098 401 0.99 - - - - - - 0.990 - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
75. dhrs13l1 ENSDARG00000098746 102 0.989 - - - - - - 0.989 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
76. si:ch211-219f7.3 si:ch211-219f7.3 48 0.988 - - - - - - 0.988 - -
77. fntb ENSDARG00000027916 736 0.987 - - - - - - 0.987 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
78. inadl 80 0.987 - - - - - - 0.987 - - InaD-like (Drosophila), transcript variant X4
79. U3 U3 287 0.987 - - - - - - 0.987 - -
80. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 0.986 - - - - - - 0.986 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
81. GSG2 GSG2 1162 0.985 - - - - - - 0.985 - -
82. BX296557.2 BX296557.2 1083 0.985 - - - - - - 0.985 - -
83. ulk4 ENSDARG00000004176 85 0.984 - - - - - - 0.984 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
84. SLC44A2 ENSDARG00000037059 88 0.984 - - - - - - 0.984 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
85. SUOX ENSDARG00000091574 122 0.984 - - - - - - 0.984 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
86. tbc1d22a ENSDARG00000045510 363 0.984 - - - - - - 0.984 - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
87. CT030012.1 ENSDARG00000105611 154 0.983 - - - - - - 0.983 - -
88. si:dkeyp-86h10.3 ENSDARG00000095615 253 0.983 - - - - - - 0.983 - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
89. extl2 ENSDARG00000063191 118 0.982 - - - - - - 0.982 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
90. ppcs ENSDARG00000061889 224 0.982 - - - - - - 0.982 - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
91. tmprss13a ENSDARG00000100969 84 0.979 - - - - - - 0.979 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
92. fam193b ENSDARG00000102831 442 0.979 - - - - - - 0.979 - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
93. zgc:165481 ENSDARG00000060092 95 0.979 - - - - - - 0.979 - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
94. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 0.975 - - - - - - 0.975 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
95. esrrga ENSDARG00000004861 805 0.974 - - - - - - 0.974 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
96. fam83b ENSDARG00000078309 318 0.974 - - - - - - 0.974 - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
97. CABZ01044023.1 ENSDARG00000117734 240 0.974 - - - - - - 0.974 - -
98. zgc:110434_1 30 0.973 - - - - - - 0.973 - - zgc:110434
99. tmem68 ENSDARG00000086737 209 0.972 - - - - - - 0.972 - - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
100. nudt17 ENSDARG00000008014 479 0.972 - - - - - - 0.972 - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]

There are 1266 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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