Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-113a14.10_1

Gene Name Gene ID Reads Annotation
si:ch211-113a14.10_1 si:ch211-113a14.10_1 59










Genes with expression patterns similar to si:ch211-113a14.10_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 5 1.000 - - - 1.000 - 1.000 1.000 1.000
2. LRCH4 ENSDARG00000068258 22 2 - - - - 1.000 - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
3. si:ch211-93g21.1 ENSDARG00000093602 5 1.942 - - - - 1.000 - - 0.942 - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
4. rpz3 ENSDARG00000069728 11 1.829 - - - - 1.000 - - 0.829 - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
5. bicc1b ENSDARG00000070497 406 1.77 0.858 - - - - - 0.912 - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
6. limk1b ENSDARG00000003022 172 1.747 0.838 - - - - - 0.909 - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
7. ccr12.3 ccr12.3 79 1.738 0.863 - - - - - 0.875 - -
8. FAM35A FAM35A 1091 1.711 0.864 - - - - - 0.847 - -
9. FBXO4 ENSDARG00000074170 54 1.707 0.712 - - - - - 0.995 - - F-box protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-415]
10. zgc:110434_1 30 1.59 - - - - 0.772 - - 0.818 - zgc:110434
11. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 1.56 0.830 - - - - - 0.730 - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
12. cnp ENSDARG00000070822 649 1.503 0.712 - - - - - 0.791 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
13. si:ch211-272h9.5 ENSDARG00000092167 8 1 - - - - 1.000 - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
14. espnla ENSDARG00000078211 8 1 - - - - 1.000 - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
15. mir430c-2 2 1 - - - - 1.000 - - - - microRNA 430c-2
16. ROCK2_2 ROCK2_2 0 1 - - - - 1.000 - - - -
17. KBTBD11 ENSDARG00000104958 8 1 - - - - 1.000 - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
18. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - 1.000 - - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
19. PEG3_8 PEG3_8 1 1 - - - - 1.000 - - - -
20. ZNF70_13 ZNF70_13 1 1 - - - - 1.000 - - - -
21. si:dkey-34e4.1 ENSDARG00000022085 5 1 - - - - 1.000 - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
22. si:ch73-211l2.3 ENSDARG00000075932 4 1 - - - - 1.000 - - - - si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
23. ENDOD1_4 ENDOD1_4 2 1 - - - - 1.000 - - - -
24. ADAD1 ENSDARG00000089181 9 1 - - - - 1.000 - - - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
25. omga ENSDARG00000086573 3 1 - - - - 1.000 - - - - oligodendrocyte myelin glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-091204-203]
26. zgc:173652 22 1 - - - - 1.000 - - - - zgc:173652
27. MUC5B MUC5B 1 1 - - - - 1.000 - - - -
28. CABZ01071407.1 CABZ01071407.1 6 1 - - - - 1.000 - - - -
29. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - - - - 1.000 - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
30. tmem144b ENSDARG00000036247 2 1 - - - - 1.000 - - - - transmembrane protein 144b [Source:ZFIN;Acc:ZDB-GENE-041010-58]
31. MEIS2 MEIS2 3 1 - - - - 1.000 - - - -
32. irf1b ENSDARG00000043249 30 1 - - - - 1.000 - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
33. pcdh1g26 ENSDARG00000099931 1 1 - - - - - - - 1.000 - protocadherin 1 gamma 26 [Source:ZFIN;Acc:ZDB-GENE-050609-21]
34. zgc:162971 ENSDARG00000101093 1 1 - - - - 1.000 - - - - zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
35. illr3 ENSDARG00000018327 5 1 - - - - 1.000 - - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
36. zgc:113343 ENSDARG00000103196 2 1 - - - - 1.000 - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
37. BX005001.2 BX005001.2 2 1 - - - - - - - 1.000 -
38. GSTK1_2 GSTK1_2 8 1 - - - - 1.000 - - - -
39. SLC22A23_2 SLC22A23_2 0 1 - - - - 1.000 - - - -
40. CABZ01076758.1 ENSDARG00000100810 3 1 - - - - 1.000 - - - -
41. si:ch1073-15f19.2 ENSDARG00000095640 4 1 - - - - 1.000 - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
42. usp47 ENSDARG00000102645 16 1 - - - - - - - 1.000 - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
43. fgf22 ENSDARG00000076510, ENSDARG00000114053, ENSDARG00000115407 3 1 - - - - 1.000 - - - - fibroblast growth factor 22 [Source:ZFIN;Acc:ZDB-GENE-050208-380]
44. CABZ01040931.1 ENSDARG00000099474 0 1 - - - - 1.000 - - - -
45. acsl6 0 1 - - - - 1.000 - - - - acyl-CoA synthetase long-chain family member 6
46. BX000999.2 BX000999.2 2353 1 - - - - - - - 1.000 -
47. TRIM8 TRIM8 5 1 - - - - - - - 1.000 -
48. CU693477.1 CU693477.1 7 1 - - - - 1.000 - - - -
49. syne3 ENSDARG00000023237 23 1 - - - - - - - 1.000 - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
50. bmpr1ab ENSDARG00000105045 2 1 - - - - 1.000 - - - - bone morphogenetic protein receptor, type IAb [Source:ZFIN;Acc:ZDB-GENE-040912-150]
51. LRRC69 LRRC69 1 1 - - - - 1.000 - - - -
52. si:dkey-56e5.2 si:dkey-56e5.2 14 1 - - - - 1.000 - - - -
53. CABZ01076817.1 CABZ01076817.1 4 1 - - - - 1.000 - - - -
54. U1_31 U1_31 0 1 - - - - 1.000 - - - -
55. SYNPO 2 1 - - - - - - - 1.000 - synaptopodin, transcript variant X2
56. RNaseP_nuc_2 RNaseP_nuc_2 0 1 - - - - 1.000 - - - -
57. BX000477.1 BX000477.1 1 1 - - - - 1.000 - - - -
58. CABZ01086835.1 ENSDARG00000110902 0 1 - - - - 1.000 - - - - synaptotagmin-4-like [Source:NCBI gene;Acc:101884989]
59. FP236631.1 FP236631.1 3 1 - - - - - - - 1.000 -
60. sult1st2 ENSDARG00000041540 1 1 - - - - 1.000 - - - - sulfotransferase family 1, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-27]
61. si:zfos-1505d6.3 ENSDARG00000089966 3 1 - - - - - - - 1.000 - si:zfos-1505d6.3 [Source:ZFIN;Acc:ZDB-GENE-120214-22]
62. ST6GALNAC2 4 1 - - - - - - - 1.000 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
63. si:dkey-31n13.4 ENSDARG00000101312 1 1 - - - - - - - 1.000 - si:dkey-31n13.4 [Source:ZFIN;Acc:ZDB-GENE-071008-3]
64. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - 1.000 - - - -
65. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - 1.000 - - - -
66. fam189a1 ENSDARG00000053380 11 1 - - - - 1.000 - - - - family with sequence similarity 189, member A1 [Source:ZFIN;Acc:ZDB-GENE-040718-129]
67. BX469930.1 ENSDARG00000092358 3 1 - - - - 1.000 - - - -
68. GRAMD3 GRAMD3 4 1 - - - - - - - 1.000 -
69. U1_34 U1_34 0 1 - - - - 1.000 - - - -
70. UNC5CL UNC5CL 4 1 - - - - - - - 1.000 -
71. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - - - 1.000 - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
72. si:ch211-79g12.1 ENSDARG00000116692 2 1 - - - - 1.000 - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
73. TMEM150B TMEM150B 1 1 - - - - 1.000 - - - -
74. DENND1C DENND1C 1 1 - - - - 1.000 - - - -
75. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - 1.000 - - - -
76. nitr7b ENSDARG00000067977 0 1 - - - - 1.000 - - - - novel immune-type receptor 7b [Source:ZFIN;Acc:ZDB-GENE-041001-8]
77. zgc:103519 zgc:103519 3 1 - - - - 1.000 - - - -
78. si:dkey-13k17.1 si:dkey-13k17.1 2 1 - - - - 1.000 - - - -
79. mamdc2a ENSDARG00000098345 21 1 - - - - 1.000 - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
80. ddx46 ENSDARG00000099458 24 1 - - - - 1.000 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
81. pcdh15b ENSDARG00000008127 2 1 - - - - 1.000 - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
82. si:ch211-128b10.5 si:ch211-128b10.5 3 1 - - - - 1.000 - - - -
83. si:dkey-9i5.4 si:dkey-9i5.4 14 1 - - - - 1.000 - - - -
84. si:ch73-138e16.4 ENSDARG00000102363 0 1 - - - - 1.000 - - - - si:ch73-138e16.4 [Source:ZFIN;Acc:ZDB-GENE-070705-203]
85. Metazoa_SRP_30 Metazoa_SRP_30 10 1 - - - - 1.000 - - - -
86. PLB1 PLB1 20 1 - - - - 1.000 - - - -
87. CLCN2 CLCN2 8 1 - - - - 1.000 - - - -
88. BX511066.3 BX511066.3 1 1 - - - - - - - 1.000 -
89. CR753866.2 CR753866.2 6 1 - - - - 1.000 - - - -
90. gatsl3 7 1 - - - - 1.000 - - - - GATS protein-like 3
91. CABZ01031627.2 CABZ01031627.2 1 1 - - - - 1.000 - - - -
92. CABZ01069745.1 CABZ01069745.1 0 1 - - - - 1.000 - - - -
93. si:dkey-220o5.5 ENSDARG00000099211 0 1 - - - - 1.000 - - - - si:dkey-220o5.5 [Source:ZFIN;Acc:ZDB-GENE-081104-376]
94. AL935141.5 AL935141.5 24 1 - - - - 1.000 - - - -
95. opn1sw1 ENSDARG00000045677 1 1 - - - - 1.000 - - - - opsin 1 (cone pigments), short-wave-sensitive 1 [Source:ZFIN;Acc:ZDB-GENE-991109-25]
96. ENSDARG00000091583 ENSDARG00000091583 0 1 - - - - 1.000 - - - -
97. greb1l_1 ENSDARG00000039196 8 1 - - - - 1.000 - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
98. USP2 USP2 157 1 - - - - 1.000 - - - -
99. agbl5 ENSDARG00000045900 2 1 - - - - 1.000 - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
100. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - 1.000 - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]

There are 593 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA