Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-110e4.2

Gene Name Gene ID Reads Annotation
si:ch211-110e4.2 si:ch211-110e4.2 12










Genes with expression patterns similar to si:ch211-110e4.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-110e4.2 si:ch211-110e4.2 12 5 1.000 - 1.000 - 1.000 - - 1.000 1.000
2. si:dkeyp-72h1.1 ENSDARG00000095347 7 1.88 - - - - 0.906 - - - 0.974 si:dkeyp-72h1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-447]
3. SNORD38 SNORD38 171 1.817 0.993 - - - 0.824 - - - -
4. cenpv ENSDARG00000092285 10 1.803 - - 0.830 - - - - - 0.973 centromere protein V [Source:ZFIN;Acc:ZDB-GENE-060526-76]
5. ZNF648 ENSDARG00000104823 194 1.777 0.993 - - - 0.784 - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
6. CABZ01054965.1 ENSDARG00000090844 74 1.773 0.933 - - - 0.840 - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
7. chia.6 ENSDARG00000093193, ENSDARG00000116259 25 1.641 - - 0.807 - - - - - 0.834 chitinase, acidic.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1140]
8. zgc:162913 zgc:162913 155 1.471 0.732 - - - - - - - 0.739
9. ompa ENSDARG00000105218 3 1 - - - - - - - - 1.000 olfactory marker protein a [Source:ZFIN;Acc:ZDB-GENE-050626-118]
10. XRCC2 ENSDARG00000013933 15 1 - - - - - - - 1.000 - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
11. grk7b ENSDARG00000055534 17 1 1.000 - - - - - - - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
12. gcdhl gcdhl 38 1 1.000 - - - - - - - -
13. fasn_1 ENSDARG00000087657 31 0.993 0.993 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
14. CU929356.4 CU929356.4 86 0.993 0.993 - - - - - - - -
15. CT573256.1 ENSDARG00000091657 18 0.993 0.993 - - - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
16. igsf5 igsf5 85 0.993 0.993 - - - - - - - -
17. si:ch73-138i16.1 ENSDARG00000095562 8 0.993 0.993 - - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
18. zgc:173837 ENSDARG00000076949 24 0.993 0.993 - - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
19. lrrc4.2 ENSDARG00000003020 235 0.993 0.993 - - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
20. RAB38 122 0.993 0.993 - - - - - - - - RAB38, member RAS oncogene family
21. emx3 ENSDARG00000020417 85 0.993 0.993 - - - - - - - - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
22. CREB3L3 CREB3L3 24 0.993 0.993 - - - - - - - -
23. lipt2 ENSDARG00000069852 14 0.993 0.993 - - - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
24. CR381673.1 ENSDARG00000098337 7 0.993 0.993 - - - - - - - -
25. ZNF337_17 ZNF337_17 12 0.993 0.993 - - - - - - - -
26. dao.3 ENSDARG00000035601 15 0.993 0.993 - - - - - - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
27. crybb3 ENSDARG00000041301 48 0.993 0.993 - - - - - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
28. si:ch211-242f23.8 ENSDARG00000087585 22 0.993 0.993 - - - - - - - - si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
29. AL928712.1 AL928712.1 101 0.993 0.993 - - - - - - - -
30. MUC5AC MUC5AC 32 0.993 0.993 - - - - - - - -
31. si:dkey-199f5.6 ENSDARG00000094400 51 0.993 0.993 - - - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
32. CR848761.1 CR848761.1 4 0.993 0.993 - - - - - - - -
33. si:dkey-197d18.1 si:dkey-197d18.1 4 0.993 0.993 - - - - - - - -
34. si:dkey-13n15.2 ENSDARG00000061806, ENSDARG00000094417 4 0.993 0.993 - - - - - - - - si:dkey-13n15.2 [Source:ZFIN;Acc:ZDB-GENE-060526-209]
35. BX908804.1 ENSDARG00000002797 4 0.993 0.993 - - - - - - - -
36. TULP2 TULP2 38 0.993 0.993 - - - - - - - -
37. Metazoa_SRP_18 Metazoa_SRP_18 4 0.993 0.993 - - - - - - - -
38. PRKCA_1 ENSDARG00000099841 12 0.993 0.993 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
39. fam101a 4 0.993 0.993 - - - - - - - - family with sequence similarity 101, member A
40. si:ch211-67f13.7 ENSDARG00000077845 8 0.993 0.993 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
41. sntg2 ENSDARG00000101660 19 0.993 0.993 - - - - - - - - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
42. slc24a4b ENSDARG00000067509 33 0.993 0.993 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
43. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.993 0.993 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
44. SYTL1 ENSDARG00000070094 282 0.993 0.993 - - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
45. si:ch211-76m11.15 ENSDARG00000098979 6 0.993 0.993 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
46. GPR180 73 0.993 0.993 - - - - - - - - G protein-coupled receptor 180, transcript variant X2
47. ap4b1 ENSDARG00000013726 382 0.993 0.993 - - - - - - - - adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
48. zgc:113443 359 0.988 0.988 - - - - - - - - zgc:113443, transcript variant X3
49. FAM163A ENSDARG00000093021 86 0.987 0.987 - - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
50. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.987 0.987 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
51. AP5B1 ENSDARG00000078805 62 0.984 0.984 - - - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
52. CCDC108 CCDC108 74 0.982 0.982 - - - - - - - -
53. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.982 0.982 - - - - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
54. TRIM35_10 TRIM35_10 484 0.981 0.981 - - - - - - - -
55. cspg5b ENSDARG00000099793 67 0.981 0.981 - - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
56. pms2 ENSDARG00000075672, ENSDARG00000115929 248 0.981 0.981 - - - - - - - - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
57. zgc:172106 ENSDARG00000017984 90 0.981 0.981 - - - - - - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
58. eng2a eng2a 186 0.979 0.979 - - - - - - - -
59. thtpa ENSDARG00000063049 286 0.979 0.979 - - - - - - - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
60. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 0.979 0.979 - - - - - - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
61. otc ENSDARG00000062147 95 0.979 0.979 - - - - - - - - ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
62. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.979 0.979 - - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
63. ephx2 ENSDARG00000040255 105 0.977 - - - - 0.977 - - - - epoxide hydrolase 2, cytoplasmic [Source:ZFIN;Acc:ZDB-GENE-041212-70]
64. ccdc172 ENSDARG00000039937 1 0.973 - - - - - - - - 0.973 coiled-coil domain containing 172 [Source:ZFIN;Acc:ZDB-GENE-090313-1]
65. tmem168b ENSDARG00000062168 17 0.973 0.973 - - - - - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
66. si:ch73-369o7.3 si:ch73-369o7.3 20 0.973 - - - - - - - - 0.973
67. CABZ01070852.2 ENSDARG00000114999 16 0.973 - - - - - - - - 0.973
68. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 0.973 - - - - - - - - 0.973 abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
69. arhgap17a ENSDARG00000020488, ENSDARG00000113457 11 0.973 - - - - - - - - 0.973 Rho GTPase activating protein 17a [Source:ZFIN;Acc:ZDB-GENE-050417-56]
70. si:ch211-117i10.10 si:ch211-117i10.10 18 0.973 0.973 - - - - - - - -
71. iffo1a ENSDARG00000062976 5 0.973 - - - - - - - - 0.973 intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
72. ugt5d1 ENSDARG00000002394 5 0.973 - - - - - - - - 0.973 UDP glucuronosyltransferase 5 family, polypeptide D1 [Source:ZFIN;Acc:ZDB-GENE-091118-36]
73. CR848836.4 CR848836.4 4 0.973 - - - - - - - - 0.973
74. cyp8b1 ENSDARG00000053068 3 0.973 - - - - - - - - 0.973 cytochrome P450, family 8, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040808-53]
75. hbl3 11 0.973 - - - - - - - - 0.973 hexose-binding lectin 3, transcript variant X1
76. CABZ01070631.1 ENSDARG00000110183 6 0.973 - - - - - - - - 0.973 F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
77. si:ch211-253b18.3 si:ch211-253b18.3 4 0.973 - - - - - - - - 0.973
78. si:ch211-166e11.1 si:ch211-166e11.1 1 0.973 - - - - - - - - 0.973
79. si:ch211-132b12.2 ENSDARG00000094946 15 0.973 - - - - - - - - 0.973 si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
80. zgc:92590 ENSDARG00000040282 13 0.973 - - - - - - - - 0.973 zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
81. zgc:194125 ENSDARG00000113977 16 0.973 - - - - - - - - 0.973 zgc:194125 [Source:ZFIN;Acc:ZDB-GENE-080722-16]
82. zgc:195075 ENSDARG00000060049 4 0.973 - - - - - - - - 0.973 zgc:195075 [Source:ZFIN;Acc:ZDB-GENE-080723-70]
83. zgc:171426 ENSDARG00000074764 16 0.973 - - - - - - - - 0.973 zgc:171426 [Source:ZFIN;Acc:ZDB-GENE-080212-2]
84. mstna ENSDARG00000042947 1 0.973 - - - - - - - - 0.973 myostatin a [Source:ZFIN;Acc:ZDB-GENE-050208-735]
85. cldn10 cldn10 1 0.973 - - - - - - - - 0.973
86. U6_4 U6_4 1 0.973 - - - - - - - - 0.973
87. stoml3a ENSDARG00000079914 4 0.973 - - - - - - - - 0.973 stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
88. SORT1 SORT1 33 0.973 - - - - - - - - 0.973
89. CABZ01080435.1 CABZ01080435.1 1 0.973 - - - - - - - - 0.973
90. MFN1 ENSDARG00000011884 1 0.973 - - - - - - - - 0.973 mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
91. ela2l ENSDARG00000056765, ENSDARG00000114256 31 0.973 - - - - - - - - 0.973 elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
92. TRIM14_2 TRIM14_2 15 0.973 - - - - - - - - 0.973
93. LRRC30 LRRC30 83 0.973 - - - - - - - - 0.973
94. SBK3 ENSDARG00000057687 1 0.973 - - - - - - - - 0.973 SH3 domain binding kinase family, member 3 [Source:ZFIN;Acc:ZDB-GENE-080204-39]
95. b3galt4 ENSDARG00000076218 1 0.973 - - - - - - - - 0.973 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-081104-482]
96. illr2 ENSDARG00000094882 1 0.973 - - - - - - - - 0.973 immune-related, lectin-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050311-3]
97. cyp2ad2 ENSDARG00000021172 2 0.973 - - - - - - - - 0.973 cytochrome P450, family 2, subfamily AD, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-020812-2]
98. btg4 ENSDARG00000035171, ENSDARG00000109355 6 0.973 - - - - - - - - 0.973 B-cell translocation gene 4 [Source:ZFIN;Acc:ZDB-GENE-031008-1]
99. cd22 ENSDARG00000053005 3 0.973 - - - - - - - - 0.973 cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
100. BX927244.2 ENSDARG00000117705 1 0.973 - - - - - - - - 0.973

There are 476 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA