Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-10p21.1

Gene Name Gene ID Reads Annotation
si:ch211-10p21.1 si:ch211-10p21.1 6










Genes with expression patterns similar to si:ch211-10p21.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-10p21.1 si:ch211-10p21.1 6 6 1.000 - 1.000 - 1.000 1.000 - 1.000 1.000
2. fermt3a fermt3a 56 2.557 1.000 - 0.806 - - - - - 0.751
3. ucp3 ENSDARG00000091209 137 2.53 1.000 - 0.743 - - 0.787 - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
4. epb41l3b ENSDARG00000019917 9 2 1.000 - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
5. SNORA81_1 SNORA81_1 8 2 1.000 - - - - 1.000 - - -
6. col28a1 col28a1 5 2 1.000 - - - 1.000 - - - -
7. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
8. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
9. si:ch211-170d12.2 si:ch211-170d12.2 1 2 1.000 - - - 1.000 - - - -
10. irak3 ENSDARG00000053131 16 2 - - - - 1.000 1.000 - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
11. si:dkey-2j6.2 si:dkey-2j6.2 5 1.975 - - - - 0.975 1.000 - - -
12. csrnp1b ENSDARG00000038429 10 1.974 1.000 - - - - - - - 0.974 cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
13. cacna1aa ENSDARG00000037905 4 1.929 - - 0.929 - - 1.000 - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
14. CABZ01053592.1 ENSDARG00000117388 6 1.929 - - 0.929 - - 1.000 - - -
15. CU984579.1 ENSDARG00000116863 15 1.929 1.000 - 0.929 - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
16. si:dkey-114b16.5 si:dkey-114b16.5 5 1.929 - - 0.929 - - 1.000 - - -
17. si:dkey-192l18.9 ENSDARG00000077878 10 1.925 - - - - - 1.000 - - 0.925 si:dkey-192l18.9 [Source:ZFIN;Acc:ZDB-GENE-120709-25]
18. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1.92 - - 0.929 - - - - - 0.991 popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
19. or115-14 ENSDARG00000094235 17 1.918 1.000 - - - - - - 0.918 - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
20. GMEB2 ENSDARG00000093240 6 1.918 1.000 - - - - - - 0.918 - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
21. itln1 ENSDARG00000007534 8 1.917 - - 0.917 - - 1.000 - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
22. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
23. zgc:92658 8 1.892 1.000 - - - - - - 0.892 - zgc:92658
24. si:ch73-111m19.2 ENSDARG00000003077 43 1.884 1.000 - - - - - - 0.884 - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
25. stoml3b ENSDARG00000057035 15 1.883 - - 0.883 - 1.000 - - - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
26. BX682558.1 ENSDARG00000101975 30 1.875 - - 0.875 - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
27. si:dkey-287f10.2 si:dkey-287f10.2 3 1.847 - - 0.929 - - - - 0.918 -
28. si:ch211-193k19.2 ENSDARG00000077572 35 1.834 - - - - 1.000 - - - 0.834 si:ch211-193k19.2 [Source:ZFIN;Acc:ZDB-GENE-060503-203]
29. cx45.6 cx45.6 26 1.834 1.000 - - - - - - - 0.834
30. CCDC134_1 CCDC134_1 200 1.814 1.000 - - - - - - - 0.814
31. axdnd1 ENSDARG00000062355 30 1.808 - - - - 0.808 1.000 - - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
32. tagln ENSDARG00000045408 48 1.806 - - 0.929 - - 0.877 - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
33. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
34. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1.756 1.000 - 0.756 - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
35. hist2h3c_1 ENSDARG00000094154 45 1.755 - - - - - 1.000 - 0.755 - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
36. sycp1 ENSDARG00000003904 8 1.721 1.000 - 0.721 - - - - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
37. npvf ENSDARG00000036227 23 1.708 - - 0.790 - - - - 0.918 - neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
38. im:7141269 ENSDARG00000101756 30 1.52 - - - - - 0.742 - - 0.778 im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
39. si:ch211-67e16.3 ENSDARG00000078193 11 1.518 - - 0.736 - - - - - 0.782 si:ch211-67e16.3 [Source:ZFIN;Acc:ZDB-GENE-070912-310]
40. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1.48 - - 0.720 - - - - 0.760 - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
41. si:ch73-239k17.1 si:ch73-239k17.1 44 1.463 - - 0.751 - - - - - 0.712
42. ZBTB32 ENSDARG00000073726 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
43. APP APP 0 1 - - - - - 1.000 - - -
44. FP236168.1 FP236168.1 150 1 1.000 - - - - - - - -
45. si:dkey-282h22.5 ENSDARG00000092458 7 1 - - - - 1.000 - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
46. gcdhl gcdhl 38 1 - - - - 1.000 - - - -
47. GMNC ENSDARG00000068719 28 1 - - - - - 1.000 - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
48. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
49. BX323854.3 BX323854.3 62 1 1.000 - - - - - - - -
50. SLC39A8 ENSDARG00000056757 52 1 1.000 - - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
51. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - - - 1.000 - - - -
52. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
53. hcrt ENSDARG00000070932 4 1 - - - - 1.000 - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
54. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
55. si:dkey-217m5.3 si:dkey-217m5.3 22 1 1.000 - - - - - - - -
56. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
57. ssh1b ENSDARG00000010031 4 1 1.000 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
58. si:ch211-126g16.8 3 1 - - - - - 1.000 - - - si:ch211-126g16.8, transcript variant X1
59. GARNL3 GARNL3 1 1 - - - - - 1.000 - - -
60. si:dkey-117n7.2 ENSDARG00000093135 40 1 - - - - - 1.000 - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
61. si:dkey-114b16.4 si:dkey-114b16.4 35 1 - - - - - 1.000 - - -
62. ZBED1_2 ZBED1_2 0 1 - - - - 1.000 - - - -
63. tmem168b ENSDARG00000062168 17 1 - - - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
64. URB1 ENSDARG00000060308 78 1 1.000 - - - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
65. FKBP15_2 FKBP15_2 40 1 - - - - - 1.000 - - -
66. zgc:55413 79 1 - - - - - 1.000 - - - zgc:55413
67. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
68. si:dkey-26g8.9 si:dkey-26g8.9 2 1 1.000 - - - - - - - -
69. VOPP1 ENSDARG00000076373 12 1 - - - - - 1.000 - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
70. TRIM35_1 TRIM35_1 11 1 - - - - - 1.000 - - -
71. supt7l ENSDARG00000013461 41 1 - - - - - 1.000 - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
72. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
73. RNF14 ENSDARG00000043905 41 1 1.000 - - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
74. gfra1a ENSDARG00000099732 33 1 - - 1.000 - - - - - - gdnf family receptor alpha 1a [Source:ZFIN;Acc:ZDB-GENE-010226-2]
75. si:dkey-93l1.4 ENSDARG00000094927 0 1 - - - - - 1.000 - - - si:dkey-93l1.4 [Source:ZFIN;Acc:ZDB-GENE-090311-20]
76. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1 1.000 - - - - - - - -
77. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1 - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
78. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
79. crtac1a ENSDARG00000059826 22 1 1.000 - - - - - - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
80. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
81. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
82. ABI3BP 2 1 - - - - - 1.000 - - - ABI family member 3 binding protein, transcript variant X3
83. BX321875.5_1 BX321875.5_1 0 1 - - - - - 1.000 - - -
84. CABZ01080492.1 CABZ01080492.1 495 1 1.000 - - - - - - - -
85. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 - - - - - 1.000 - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
86. fam163b ENSDARG00000073914 46 1 1.000 - - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
87. FAM196B FAM196B 1 1 1.000 - - - - - - - -
88. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1 - - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
89. olfcs2 ENSDARG00000100451 1 1 1.000 - - - - - - - - olfactory receptor C family, s2 [Source:ZFIN;Acc:ZDB-GENE-060503-238]
90. zap70 ENSDARG00000015752 1 1 1.000 - - - - - - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
91. RECK ENSDARG00000090039 15 1 - - - - - 1.000 - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
92. ENDOD1_2 ENDOD1_2 2 1 - - - - - 1.000 - - -
93. sycp2 ENSDARG00000088950 3 1 - - - - 1.000 - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
94. SLC16A7 ENSDARG00000098258 4 1 - - - - 1.000 - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
95. oca2 ENSDARG00000061303 22 1 - - - - - 1.000 - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
96. ano6 ENSDARG00000061544 21 1 1.000 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
97. aqp3b ENSDARG00000069518 80 1 1.000 - - - - - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
98. ddb1_1 ENSDARG00000074431 2 1 - - - - 1.000 - - - - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
99. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1 - - - - - 1.000 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
100. mir142a 20 1 - - - - - 1.000 - - - microRNA 142a

There are 868 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA