Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-10p21.1

Gene Name Gene ID Reads Annotation
si:ch211-10p21.1 si:ch211-10p21.1 6










Genes with expression patterns similar to si:ch211-10p21.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-10p21.1 si:ch211-10p21.1 6 6 1.000 - 1.000 - 1.000 1.000 - 1.000 1.000
2. fermt3a fermt3a 56 2.557 1.000 - 0.806 - - - - - 0.751
3. ucp3 ENSDARG00000091209 137 2.53 1.000 - 0.743 - - 0.787 - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
4. si:ch211-170d12.2 si:ch211-170d12.2 1 2 1.000 - - - 1.000 - - - -
5. irak3 ENSDARG00000053131 16 2 - - - - 1.000 1.000 - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
6. col28a1 col28a1 5 2 1.000 - - - 1.000 - - - -
7. epb41l3b ENSDARG00000019917 9 2 1.000 - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
8. SNORA81_1 SNORA81_1 8 2 1.000 - - - - 1.000 - - -
9. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
10. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
11. si:dkey-2j6.2 si:dkey-2j6.2 5 1.975 - - - - 0.975 1.000 - - -
12. csrnp1b ENSDARG00000038429 10 1.974 1.000 - - - - - - - 0.974 cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
13. CABZ01053592.1 ENSDARG00000117388 6 1.929 - - 0.929 - - 1.000 - - -
14. si:dkey-114b16.5 si:dkey-114b16.5 5 1.929 - - 0.929 - - 1.000 - - -
15. CU984579.1 ENSDARG00000116863 15 1.929 1.000 - 0.929 - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
16. cacna1aa ENSDARG00000037905 4 1.929 - - 0.929 - - 1.000 - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
17. si:dkey-192l18.9 ENSDARG00000077878 10 1.925 - - - - - 1.000 - - 0.925 si:dkey-192l18.9 [Source:ZFIN;Acc:ZDB-GENE-120709-25]
18. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1.92 - - 0.929 - - - - - 0.991 popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
19. or115-14 ENSDARG00000094235 17 1.918 1.000 - - - - - - 0.918 - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
20. GMEB2 ENSDARG00000093240 6 1.918 1.000 - - - - - - 0.918 - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
21. itln1 ENSDARG00000007534 8 1.917 - - 0.917 - - 1.000 - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
22. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
23. zgc:92658 8 1.892 1.000 - - - - - - 0.892 - zgc:92658
24. si:ch73-111m19.2 ENSDARG00000003077 43 1.884 1.000 - - - - - - 0.884 - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
25. stoml3b ENSDARG00000057035 15 1.883 - - 0.883 - 1.000 - - - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
26. BX682558.1 ENSDARG00000101975 30 1.875 - - 0.875 - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
27. si:dkey-287f10.2 si:dkey-287f10.2 3 1.847 - - 0.929 - - - - 0.918 -
28. cx45.6 cx45.6 26 1.834 1.000 - - - - - - - 0.834
29. si:ch211-193k19.2 ENSDARG00000077572 35 1.834 - - - - 1.000 - - - 0.834 si:ch211-193k19.2 [Source:ZFIN;Acc:ZDB-GENE-060503-203]
30. CCDC134_1 CCDC134_1 200 1.814 1.000 - - - - - - - 0.814
31. axdnd1 ENSDARG00000062355 30 1.808 - - - - 0.808 1.000 - - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
32. tagln ENSDARG00000045408 48 1.806 - - 0.929 - - 0.877 - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
33. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
34. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1.756 1.000 - 0.756 - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
35. hist2h3c_1 ENSDARG00000094154 45 1.755 - - - - - 1.000 - 0.755 - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
36. sycp1 ENSDARG00000003904 8 1.721 1.000 - 0.721 - - - - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
37. npvf ENSDARG00000036227 23 1.708 - - 0.790 - - - - 0.918 - neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
38. im:7141269 ENSDARG00000101756 30 1.52 - - - - - 0.742 - - 0.778 im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
39. si:ch211-67e16.3 ENSDARG00000078193 11 1.518 - - 0.736 - - - - - 0.782 si:ch211-67e16.3 [Source:ZFIN;Acc:ZDB-GENE-070912-310]
40. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1.48 - - 0.720 - - - - 0.760 - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
41. si:ch73-239k17.1 si:ch73-239k17.1 44 1.463 - - 0.751 - - - - - 0.712
42. si:ch211-59h6.1 ENSDARG00000013022 193 1 - - - - - 1.000 - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
43. SOX8 SOX8 22 1 1.000 - - - - - - - -
44. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
45. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
46. slc34a2a ENSDARG00000012903 0 1 - - - - 1.000 - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-000524-1]
47. GARNL3 GARNL3 1 1 - - - - - 1.000 - - -
48. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - - - 1.000 - - - -
49. PARM1 ENSDARG00000114063 58 1 1.000 - - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
50. olfcs2 ENSDARG00000100451 1 1 1.000 - - - - - - - - olfactory receptor C family, s2 [Source:ZFIN;Acc:ZDB-GENE-060503-238]
51. sele ENSDARG00000009123 122 1 1.000 - - - - - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
52. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -
53. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - 1.000 - - - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
54. mpp5b ENSDARG00000004721 0 1 - - - - - 1.000 - - - membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-060531-2]
55. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - - - - 1.000 - - - -
56. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
57. OSBP2 ENSDARG00000053487 15 1 1.000 - - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
58. nfil3-4 ENSDARG00000092346 3 1 - - - - - 1.000 - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
59. sult2st3 ENSDARG00000028367 79 1 1.000 - - - - - - - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
60. TRIM14_14 TRIM14_14 2 1 - - - - - 1.000 - - -
61. BX936443.2 BX936443.2 28 1 - - - - 1.000 - - - -
62. CABZ01021538.1 CABZ01021538.1 67 1 - - - - 1.000 - - - -
63. fank1 ENSDARG00000039657 9 1 - - - - - 1.000 - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
64. si:ch211-114l13.12 ENSDARG00000088019 1 1 - - - - - 1.000 - - - si:ch211-114l13.12 [Source:ZFIN;Acc:ZDB-GENE-120215-211]
65. si:ch211-132b12.7 ENSDARG00000068374 30 1 - - - - - 1.000 - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
66. sycp2 ENSDARG00000088950 3 1 - - - - 1.000 - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
67. gata2b ENSDARG00000009094 16 1 - - - - - 1.000 - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
68. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
69. FKBP15_2 FKBP15_2 40 1 - - - - - 1.000 - - -
70. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1 1.000 - - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
71. ciita ENSDARG00000090851 5 1 1.000 - - - - - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
72. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1 - - - - - 1.000 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
73. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
74. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
75. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
76. sult3st2 ENSDARG00000093619, ENSDARG00000110806 1 1 - - - - 1.000 - - - - sulfotransferase family 3, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1135]
77. cdc73 ENSDARG00000020201 22 1 1.000 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
78. scn1a 8 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
79. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
80. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
81. hcrt ENSDARG00000070932 4 1 - - - - 1.000 - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
82. CABZ01079981.1 CABZ01079981.1 8 1 - - - - - 1.000 - - -
83. fabp10b ENSDARG00000091101 44 1 - - - - - 1.000 - - - fatty acid binding protein 10b, liver basic [Source:ZFIN;Acc:ZDB-GENE-100217-2]
84. ovca2 ENSDARG00000103748 38 1 1.000 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
85. slc10a4 ENSDARG00000009131 51 1 1.000 - - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
86. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - - - 1.000 - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
87. si:ch211-219a15.4 ENSDARG00000068951 3 1 1.000 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
88. hoxc9a ENSDARG00000092809 18 1 1.000 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
89. si:dkeyp-34a4.1 si:dkeyp-34a4.1 0 1 - - - - - 1.000 - - -
90. VOPP1 ENSDARG00000076373 12 1 - - - - - 1.000 - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
91. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - 1.000 - - -
92. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
93. zgc:158654 19 1 - - - - 1.000 - - - - zgc:158654, transcript variant X1
94. cyp19a1b ENSDARG00000098360 8 1 1.000 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
95. TMEM260 ENSDARG00000076362 63 1 1.000 - - - - - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
96. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
97. KBTBD3 ENSDARG00000060512 42 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
98. si:ch211-224b1.4 si:ch211-224b1.4 29 1 - - - - - 1.000 - - -
99. TGFBR3L TGFBR3L 16 1 1.000 - - - - - - - -
100. si:dkey-257e4.2 si:dkey-257e4.2 0 1 - - - - - 1.000 - - -

There are 868 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA