Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-10j20.7

Gene Name Gene ID Reads Annotation
si:ch211-10j20.7 si:ch211-10j20.7 8










Genes with expression patterns similar to si:ch211-10j20.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-10j20.7 si:ch211-10j20.7 8 5 1.000 1.000 - - 1.000 - 1.000 1.000 -
2. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 3 1.000 1.000 - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
3. CSMD1 CSMD1 15 2.587 1.000 0.731 - - - - 0.856 - -
4. lppr5b lppr5b 23 2 1.000 1.000 - - - - - - -
5. si:dkey-56m15.4 si:dkey-56m15.4 39 2 1.000 1.000 - - - - - - -
6. PGBD4 ENSDARG00000079328 20 2 1.000 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
7. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 2 - 1.000 - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
8. SEMA6B SEMA6B 35 2 - 1.000 - - - - 1.000 - -
9. BX548021.2 BX548021.2 4 2 1.000 1.000 - - - - - - -
10. CABZ01065506.1 CABZ01065506.1 204 2 1.000 1.000 - - - - - - -
11. nitr3a_1 ENSDARG00000110676 44 2 - 1.000 - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
12. si:dkey-4j21.1 17 2 1.000 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
13. CR847504.1 ENSDARG00000102515 29 1.958 - 1.000 - - - - 0.958 - -
14. kcnip3a ENSDARG00000034229 63 1.933 - 1.000 - - - - 0.933 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
15. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.904 1.000 - - - - - 0.904 - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
16. helt ENSDARG00000056400 482 1.896 1.000 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
17. cnn1b ENSDARG00000102398 40 1.883 1.000 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
18. PPFIA3 ENSDARG00000077053 310 1.879 0.879 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
19. TENM2 ENSDARG00000037122 48 1.878 0.878 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
20. si:rp71-1f1.4 ENSDARG00000092476 11 1.875 - 1.000 - - - - - 0.875 - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
21. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.874 0.874 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
22. si:ch73-60p2.1 si:ch73-60p2.1 21 1.874 - - - - - - 0.933 0.941 -
23. odf3l2 36 1.86 1.000 - - - 0.860 - - - - outer dense fiber of sperm tails 3-like 2
24. XKR7 ENSDARG00000026333 175 1.856 0.856 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
25. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.854 0.854 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
26. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.833 - 1.000 - - - - - 0.833 -
27. ubxn1_1 ENSDARG00000090309 38 1.831 0.849 - - - - - 0.982 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
28. GADD45G GADD45G 382 1.813 0.813 1.000 - - - - - - -
29. WNK3 WNK3 36 1.794 - 1.000 - - - - 0.794 - -
30. kcnt1 ENSDARG00000079484 45 1.794 1.000 - - - - - 0.794 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
31. slc9a3.2 ENSDARG00000036722 31 1.794 - - - - - - 0.853 0.941 - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
32. zgc:194665 ENSDARG00000004577 136 1.783 0.783 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
33. il11a ENSDARG00000037859 5 1.771 0.771 - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
34. gpr22 gpr22 115 1.766 0.766 1.000 - - - - - - -
35. SERINC3 SERINC3 21 1.761 - 1.000 - - - - - 0.761 -
36. scin ENSDARG00000010728, ENSDARG00000111092 437 1.752 0.752 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
37. disp2 ENSDARG00000042846 53 1.751 0.896 - - - - - 0.855 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
38. cep128 ENSDARG00000103771 75 1.746 0.940 - - - - - 0.806 - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
39. npffr1l3 ENSDARG00000010712 18 1.731 - 0.731 - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
40. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.73 0.730 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
41. oprk1 ENSDARG00000006894 43 1.72 - - - - 0.744 - 0.976 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
42. fgf10b ENSDARG00000100475 17 1.714 - - - - - - 0.976 0.738 - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
43. rtn4r ENSDARG00000090035 46 1.709 1.000 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
44. ptprc ENSDARG00000071437 104 1.704 1.000 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
45. CABZ01029822.1 ENSDARG00000086931 1654 1.679 0.883 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
46. cnih3 ENSDARG00000014953 25 1.67 0.939 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
47. C2CD3 ENSDARG00000074137 51 1.658 0.802 - - - - - 0.856 - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
48. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.648 0.826 0.822 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
49. NLRC5 ENSDARG00000024631 11 1.641 - - - - 0.796 - 0.845 - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
50. FP085391.2 FP085391.2 85 1.638 - - - - 0.782 - 0.856 - -
51. si:dkey-165i8.5 si:dkey-165i8.5 21 1.627 0.854 - - - - - 0.773 - -
52. si:dkey-1h6.8 ENSDARG00000096703 45 1.611 0.771 - - - - - 0.840 - - si:dkey-1h6.8 [Source:ZFIN;Acc:ZDB-GENE-130603-8]
53. grnas ENSDARG00000091885 71 1.605 - 0.731 - - - - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
54. dmtn ENSDARG00000013110 791 1.531 0.810 - - - - - 0.721 - - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
55. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.506 0.752 0.754 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
56. atp2b3b ENSDARG00000023445 1424 1.503 0.787 0.716 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
57. KCNAB2 KCNAB2 129 1.487 0.733 - - - 0.754 - - - -
58. syngr3b ENSDARG00000025034 290 1.44 0.721 0.719 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
59. si:ch211-76l23.6 si:ch211-76l23.6 68 1.41 - 0.709 - - - - 0.701 - -
60. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
61. MAST1 MAST1 29 1 1.000 - - - - - - - -
62. CU104716.2 CU104716.2 10 1 - - - - - - 1.000 - -
63. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
64. GRAMD3 GRAMD3 4 1 - 1.000 - - - - - - -
65. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
66. CR847906.1 ENSDARG00000099493 88 1 - 1.000 - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
67. si:dkey-31e10.5 ENSDARG00000070502 4 1 - 1.000 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
68. zgc:92137 ENSDARG00000009443 0 1 - 1.000 - - - - - - - zgc:92137 [Source:ZFIN;Acc:ZDB-GENE-040801-179]
69. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
70. CABZ01085177.1 ENSDARG00000104644 6 1 - 1.000 - - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
71. CT573494.2 CT573494.2 58 1 - 1.000 - - - - - - -
72. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
73. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
74. asic1b ENSDARG00000101866 61 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
75. cbx7b ENSDARG00000087181 5 1 - 1.000 - - - - - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
76. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
77. BX571969.1 BX571969.1 8 1 - 1.000 - - - - - - -
78. si:dkey-207m2.4 ENSDARG00000089831, ENSDARG00000100654 3 1 1.000 - - - - - - - - si:dkey-207m2.4 [Source:ZFIN;Acc:ZDB-GENE-081103-58]
79. l3mbtl3 ENSDARG00000025983 12 1 - 1.000 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
80. si:dkey-233h12.2 si:dkey-233h12.2 1 1 1.000 - - - - - - - -
81. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
82. gdf10a ENSDARG00000095378 12 1 - 1.000 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
83. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
84. akt3a_1 ENSDARG00000104810 12 1 - 1.000 - - - - - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
85. nrcam nrcam 397 1 - 1.000 - - - - - - -
86. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
87. rgs5b ENSDARG00000017860 55 1 - 1.000 - - - - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
88. star ENSDARG00000006137 149 1 - 1.000 - - - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
89. BX005305.4 ENSDARG00000114385 6 1 - 1.000 - - - - - - - legumain [Source:NCBI gene;Acc:569153]
90. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 1 - 1.000 - - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
91. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
92. ggt1a ENSDARG00000023526 26 1 - 1.000 - - - - - - - gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
93. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
94. si:dkey-200l5.4 ENSDARG00000095294 13 1 1.000 - - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
95. pappab ENSDARG00000059858 11 1 - 1.000 - - - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
96. DIP2B DIP2B 18 1 1.000 - - - - - - - -
97. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
98. lratb 3 1 - - - - - - 1.000 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
99. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
100. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]

There are 1175 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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