Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-10j20.1

Gene Name Gene ID Reads Annotation
si:ch211-10j20.1 si:ch211-10j20.1 24










Genes with expression patterns similar to si:ch211-10j20.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-10j20.1 si:ch211-10j20.1 24 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000
2. CABZ01070637.1 CABZ01070637.1 1 2 - - 1.000 - - 1.000 - - -
3. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.994 - - - 1.000 - - - - 0.994 guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
4. UNC119 UNC119 104 1.989 - - - 1.000 - - - - 0.989
5. ETV3L ETV3L 67 1.974 - - - 0.979 - - - - 0.995
6. pdcb ENSDARG00000017634 10 1.964 - - - 0.970 - - - - 0.994 phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
7. si:dkey-58f10.4 ENSDARG00000094820 3 1.949 - - - 1.000 - - - 0.949 - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
8. CR388132.1 ENSDARG00000097728 61 1.911 - - - - - 1.000 - - 0.911
9. si:ch211-244b2.4 ENSDARG00000045530 32 1.9 - - 0.900 - - 1.000 - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
10. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1.896 - - - 1.000 - - - - 0.896 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
11. PGBD1 PGBD1 61 1.879 - - - 1.000 - 0.879 - - -
12. SLC22A7_1 SLC22A7_1 2 1.839 - - 0.839 1.000 - - - - -
13. si:ch211-190k17.13 si:ch211-190k17.13 48 1.821 - - - - 0.867 - - - 0.954
14. si:ch211-76l23.4 ENSDARG00000096242 202 1.82 - - - - - 1.000 - - 0.820 si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
15. guca1g ENSDARG00000045737, ENSDARG00000114717 22 1.819 - - - 0.858 - - - - 0.961 guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
16. zgc:158340 zgc:158340 21 1.811 - - - 0.918 - - - - 0.893
17. GPR141_1 GPR141_1 33 1.775 - - 1.000 - - - - 0.775 -
18. gabrd ENSDARG00000059763 52 1.758 - - - - 0.949 0.809 - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
19. si:dkey-22i16.9 ENSDARG00000095949 16 1.748 - - 0.748 - - 1.000 - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
20. ifit2 ifit2 11 1.725 - - - - - 1.000 - 0.725 -
21. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.717 - - - 0.745 - - - - 0.972 multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
22. si:ch211-272h9.5 ENSDARG00000092167 8 1.71 - - - - - 0.808 - 0.902 - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
23. si:rp71-26b20.1 si:rp71-26b20.1 11 1.666 - - 0.773 0.893 - - - - -
24. dlg4 88 1.568 - - - - - 0.754 - - 0.814 discs large MAGUK scaffold protein 4, transcript variant X5
25. eif2b1 ENSDARG00000091402, ENSDARG00000114640 139 1.517 - - - - - 0.812 - - 0.705 eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
26. LAMP1 1 1 - - 1.000 - - - - - - lysosomal-associated membrane protein 1
27. CABZ01084010.1 CABZ01084010.1 4 1 - - 1.000 - - - - - -
28. pdk3a ENSDARG00000014527 15 1 - - - 1.000 - - - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
29. SLC16A1 SLC16A1 37 1 - - - - - 1.000 - - -
30. mgp ENSDARG00000086189 9 1 - - 1.000 - - - - - - matrix Gla protein [Source:ZFIN;Acc:ZDB-GENE-060928-1]
31. zte38 ENSDARG00000037056 0 1 - - - 1.000 - - - - - zebrafish testis-expressed 38 [Source:ZFIN;Acc:ZDB-GENE-060312-39]
32. U1_23 U1_23 1 1 - - 1.000 - - - - - -
33. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - 1.000 - - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
34. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
35. usp46 ENSDARG00000045343 65 1 - - - - - 1.000 - - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
36. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - 1.000 - - -
37. ctdnep1b ENSDARG00000035781 65 1 - - - - - 1.000 - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
38. CR855327.1 CR855327.1 6 1 - - - - - 1.000 - - -
39. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - - - 1.000 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
40. SLC4A8 ENSDARG00000015531 16 1 - - - - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
41. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - - 1.000 - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
42. DEF6 DEF6 19 1 - - - - - 1.000 - - -
43. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 - - - 1.000 - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
44. si:dkey-4e4.1 ENSDARG00000096026, ENSDARG00000109251 48 1 - - - - - 1.000 - - - si:dkey-4e4.1 [Source:ZFIN;Acc:ZDB-GENE-110914-73]
45. si:dkey-246g23.2 ENSDARG00000062964 5 1 - - 1.000 - - - - - - si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
46. ppp1r3db ENSDARG00000076248 32 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
47. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - - - 1.000 - - - - -
48. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
49. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1 - - - - - 1.000 - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
50. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - 1.000 - - - - - -
51. CENPA 63 1 - - - - - 1.000 - - - histone H3-like centromeric protein A
52. si:ch211-133l5.4 ENSDARG00000092533 5 1 - - - 1.000 - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
53. camk1ga ENSDARG00000044526 5 1 - - 1.000 - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
54. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1 - - - - - 1.000 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
55. CABZ01041769.3 CABZ01041769.3 5 1 - - - - - 1.000 - - -
56. si:ch211-220b11.4 si:ch211-220b11.4 8 1 - - - - - 1.000 - - -
57. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - 1.000 - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
58. zgc:114037_3 17 1 - - - 1.000 - - - - - zgc:114037
59. si:dkey-29b11.3 ENSDARG00000087388 29 1 - - - 1.000 - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
60. EPHB1 ENSDARG00000076757 20 1 - - - - - 1.000 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
61. top3b ENSDARG00000027586 8 1 - - - - - 1.000 - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
62. zgc:114037_1 10 1 - - - 1.000 - - - - - zgc:114037
63. cga ENSDARG00000040479 3 1 - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
64. RD3L RD3L 15 1 - - - 1.000 - - - - -
65. ZBED1 ZBED1 2 1 - - - - - 1.000 - - -
66. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 1 - - - - - 1.000 - - -
67. APOD_1 APOD_1 7 1 - - - 1.000 - - - - -
68. hapln4 ENSDARG00000018542 10 1 - - - - - 1.000 - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
69. bdkrb1 ENSDARG00000020744 4 1 - - 1.000 - - - - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
70. MAGI2 MAGI2 1 1 - - 1.000 - - - - - -
71. clcn2 clcn2 13 1 - - - - - 1.000 - - -
72. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - 1.000 - - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
73. ABCC6 ABCC6 5 1 - - 1.000 - - - - - -
74. FAM188B2 4 1 - - - - - 1.000 - - - family with sequence similarity 188, member B2
75. NAPB_1 NAPB_1 33 1 - - 1.000 - - - - - -
76. slc35f3a ENSDARG00000075909 1 1 - - - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
77. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - 1.000 - - - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
78. AC024175.21 AC024175.21 10 1 - - - 1.000 - - - - -
79. SNORD88 SNORD88 232 1 - - - - - 1.000 - - -
80. CMKLR1_1 CMKLR1_1 2 1 - - - 1.000 - - - - -
81. RIC3 ENSDARG00000105549 3 1 - - - 1.000 - - - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
82. CABZ01055869.1 CABZ01055869.1 2 1 - - - - - 1.000 - - -
83. tmem44 ENSDARG00000068193 8 1 - - - - - 1.000 - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
84. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - 1.000 - - - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
85. tmem125b ENSDARG00000075980 2 1 - - - 1.000 - - - - - transmembrane protein 125b [Source:ZFIN;Acc:ZDB-GENE-080220-54]
86. TRIM14_3 TRIM14_3 7 1 - - 1.000 - - - - - -
87. snx24 ENSDARG00000053527 31 1 - - - - - 1.000 - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
88. mag ENSDARG00000104023 7 1 - - - 1.000 - - - - - myelin associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-041217-24]
89. si:ch211-208f21.2 ENSDARG00000094177 61 1 - - - 1.000 - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
90. CHD6 ENSDARG00000017244 219 1 - - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
91. NINL ENSDARG00000098414 0 1 - - - 1.000 - - - - - ninein-like [Source:ZFIN;Acc:ZDB-GENE-130530-768]
92. caspbl ENSDARG00000094433 1 1 - - - 1.000 - - - - - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
93. dapp1 ENSDARG00000039535 23 1 - - 1.000 - - - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
94. KBTBD13 ENSDARG00000076449 10 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
95. ppm1na ENSDARG00000010231 3 1 - - - - - 1.000 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
96. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - 1.000 - - - - -
97. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
98. lactbl1a ENSDARG00000089063, ENSDARG00000114144, ENSDARG00000116950 0 1 - - - 1.000 - - - - - lactamase, beta-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7625]
99. isg15 ENSDARG00000086374 8 1 - - - - - 1.000 - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
100. tlr20al tlr20al 0 1 - - - - - 1.000 - - -

There are 740 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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