Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-10d23.5

Gene Name Gene ID Reads Annotation
si:ch211-10d23.5 ENSDARG00000095510 2632 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]










Genes with expression patterns similar to si:ch211-10d23.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-10d23.5 ENSDARG00000095510 2632 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
2. zfand5b ENSDARG00000002271 4145 2.656 0.996 0.750 - - - - - - 0.910 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
3. BRK1 ENSDARG00000041974 6430 2.6 0.947 - - 0.757 - - - - 0.896 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
4. nr2f2 ENSDARG00000040926 5213 2.503 - - 0.806 - - - 0.724 - 0.973 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
5. nup188 ENSDARG00000030022 2398 2.465 - 0.759 - - - - 0.731 - 0.975 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
6. CABZ01034082.1 ENSDARG00000099583 2237 2.441 - 0.728 0.998 - - 0.715 - - -
7. serpinh1a ENSDARG00000075954 6488 2.412 0.979 - - - - 0.722 - - 0.711 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
8. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 2.263 - 0.828 - - - - 0.713 0.722 - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
9. prmt1 ENSDARG00000010246 11311 2.196 - 0.717 - - - - 0.712 - 0.767 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
10. necap2 ENSDARG00000046002 4372 1.93 0.984 - - - - - - - 0.946 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
11. CCDC71 CCDC71 2442 1.853 - - - - - 0.880 - - 0.973
12. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.836 0.950 - - - - - - - 0.886 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
13. eefsec ENSDARG00000004696 791 1.833 - 0.854 - - - - - - 0.979 eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
14. umps ENSDARG00000012215 4564 1.815 0.918 - 0.897 - - - - - - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
15. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.806 0.963 - - - - - - - 0.843 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
16. im:7136729 im:7136729 1625 1.804 - - - 0.825 - - - - 0.979
17. zgc:110339 ENSDARG00000046030 8180 1.801 0.859 - 0.942 - - - - - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
18. f13a1b ENSDARG00000036893 1644 1.799 0.980 - - - - - 0.819 - - coagulation factor XIII, A1 polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-9634]
19. tle2 5014 1.785 - 0.796 0.989 - - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
20. mrpl15 ENSDARG00000101306 2796 1.782 - - - - - - - 0.820 0.962 mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
21. st13 ENSDARG00000021973 7787 1.778 0.981 - - - - - - - 0.797 ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
22. Sep-02 Sep-02 10074 1.768 0.975 - - - - - 0.793 - -
23. hnrnpua ENSDARG00000015206 4012 1.767 0.994 0.773 - - - - - - - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
24. si:dkey-238c7.12 si:dkey-238c7.12 6600 1.761 - - 0.983 0.778 - - - - -
25. zgc:101640 733 1.758 - - - - - - - 0.839 0.919 zgc:101640, transcript variant X2
26. uqcrc2a ENSDARG00000014794 3949 1.757 0.988 0.769 - - - - - - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
27. cbl ENSDARG00000009958 1321 1.751 - - - - - 0.763 - - 0.988 Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
28. FAM210B ENSDARG00000052638 1755 1.75 0.997 0.753 - - - - - - - family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
29. pip5k2 pip5k2 5743 1.748 - - 0.996 - - - 0.752 - -
30. qpctla ENSDARG00000061691 869 1.746 0.995 - - - - 0.751 - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
31. uhmk1 ENSDARG00000059575 1486 1.732 - 0.760 - - - - - - 0.972 U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
32. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.73 0.992 - - - - - - - 0.738 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
33. mycla ENSDARG00000006003 1866 1.73 0.997 - - - - - - 0.733 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
34. cops5 ENSDARG00000057624 1485 1.728 - 0.731 0.997 - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
35. szrd1 ENSDARG00000056338, ENSDARG00000114005 2061 1.723 0.995 0.728 - - - - - - - SUZ RNA binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-55]
36. nt5c1bb ENSDARG00000033742 1248 1.719 - 0.738 - - - - - - 0.981 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
37. TRIO TRIO 1601 1.719 - - - - - - - 0.741 0.978
38. ppig ENSDARG00000044431 3427 1.718 - - - - - - 0.739 - 0.979 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
39. csde1_1 ENSDARG00000074758 2759 1.716 0.995 0.721 - - - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
40. knop1 ENSDARG00000077721 2198 1.716 0.997 0.719 - - - - - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
41. eif3k ENSDARG00000068289 1102 1.715 - - 0.998 - - 0.717 - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
42. srsf6a ENSDARG00000013729 8576 1.713 0.974 - - - - 0.739 - - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
43. taok2b_1 ENSDARG00000100620 2082 1.712 - - 0.998 - - - 0.714 - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
44. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 1.712 0.997 0.715 - - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
45. cdk2 ENSDARG00000026577 2835 1.708 - - 0.995 - - - 0.713 - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
46. ascc2 ENSDARG00000013058 228 1.706 - - - - - 0.729 - - 0.977 activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
47. egr2a ENSDARG00000044098 1101 1.703 - - 0.998 - - 0.705 - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
48. grina grina 4656 1.701 0.988 0.713 - - - - - - -
49. NGEF ENSDARG00000076179 445 1.694 - - - - - - 0.717 - 0.977 neuronal guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-130530-794]
50. SNRPG ENSDARG00000099667 18697 1.691 0.874 - 0.817 - - - - - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
51. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.689 - - - 0.709 - - - - 0.980 inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
52. commd4 ENSDARG00000061946 3281 1.686 - 0.718 - - - - - - 0.968 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
53. hagh ENSDARG00000025338 2911 1.686 0.975 0.711 - - - - - - - hydroxyacylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8921]
54. nap1l4b ENSDARG00000068868 3285 1.683 - 0.727 - - - - - - 0.956 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
55. HPCAL1 ENSDARG00000022763 2885 1.681 - 0.709 - - - - - - 0.972 hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
56. ptenb ENSDARG00000056623 5783 1.67 - 0.867 - - - - - - 0.803 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
57. srebf2 ENSDARG00000063438 1982 1.655 - 0.731 - - - - - - 0.924 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
58. rab20 ENSDARG00000005049 346 1.655 - - - - - - 0.810 0.845 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
59. prkx ENSDARG00000060716 530 1.653 - - - - - 0.763 - 0.890 - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
60. TRIP10 TRIP10 1079 1.65 - - - 0.778 - - - 0.872 -
61. ptbp3 ENSDARG00000043757 6760 1.645 - - - - - - 0.743 - 0.902 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
62. lepre1 lepre1 5346 1.643 - - - 0.754 - - - - 0.889
63. cyfip1 ENSDARG00000044345 5483 1.637 - 0.752 - - - - - - 0.885 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
64. MRVI1 ENSDARG00000074602 443 1.626 - - - - - 0.789 - 0.837 - murine retrovirus integration site 1 homolog [Source:ZFIN;Acc:ZDB-GENE-120221-4]
65. igdcc4 ENSDARG00000076919 1303 1.623 - - - - - - 0.779 0.844 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
66. col16a1 ENSDARG00000009194 5600 1.606 - 0.766 - - - - - - 0.840 collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
67. dazap2 ENSDARG00000007867 1805 1.602 - 0.807 - - - - 0.795 - - DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
68. rps17 ENSDARG00000104011 27028 1.599 0.750 - 0.849 - - - - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
69. exosc1 ENSDARG00000059841 6895 1.577 - 0.725 - - - - - - 0.852 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
70. hnrnpm ENSDARG00000061735 19428 1.575 - 0.709 0.866 - - - - - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
71. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.572 - - - - - - 0.714 - 0.858 cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
72. mknk1 ENSDARG00000018411 749 1.569 - 0.714 - - - - - 0.855 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
73. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.564 - - - - - - 0.795 0.769 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
74. SEMA4B SEMA4B 1259 1.556 - 0.765 - - - - - 0.791 -
75. boc ENSDARG00000074335 4832 1.554 - - - - - - 0.768 - 0.786 BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
76. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 1.55 - 0.755 - - - - - 0.795 - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
77. pcnxl3 pcnxl3 756 1.547 - - - - - 0.803 0.744 - -
78. btaf1 ENSDARG00000060089 822 1.547 - - - 0.829 - - 0.718 - - BTAF1 RNA polymerase II, B-TFIID transcription factor-associated [Source:ZFIN;Acc:ZDB-GENE-021025-1]
79. tm2d3 ENSDARG00000076618 2310 1.541 - - - 0.776 - - - - 0.765 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
80. gapdhs ENSDARG00000039914 8760 1.539 - - - 0.782 - - - - 0.757 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
81. zc3h7b 2936 1.538 - 0.748 - - - 0.790 - - - zinc finger CCCH-type containing 7B
82. sdc4 ENSDARG00000059906 10105 1.535 - 0.808 - - - - - - 0.727 syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
83. CABZ01088061.1 CABZ01088061.1 695 1.534 - - - - - - 0.717 0.817 -
84. CABZ01072585.1 CABZ01072585.1 1587 1.53 - 0.730 - - - - 0.800 - -
85. asns ENSDARG00000016375 1606 1.528 - 0.711 - - - - - 0.817 - asparagine synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1091]
86. mtap ENSDARG00000037261 610 1.52 - 0.748 - - - - 0.772 - - methylthioadenosine phosphorylase [Source:ZFIN;Acc:ZDB-GENE-040426-1505]
87. TSHZ2 ENSDARG00000079201 301 1.517 - - - - - 0.716 - 0.801 - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
88. tex10 ENSDARG00000055885 1229 1.517 - 0.798 - 0.719 - - - - - testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
89. ppp1r14aa ENSDARG00000011239 980 1.513 - 0.722 - - - - 0.791 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
90. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.507 - 0.784 - 0.723 - - - - - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
91. proza ENSDARG00000037783, ENSDARG00000116864 500 1.495 - - - - - 0.717 - 0.778 - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
92. si:dkey-18f7.2 si:dkey-18f7.2 895 1.493 - 0.708 - - - - - 0.785 -
93. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 1.488 - 0.768 - - - 0.720 - - - FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
94. slc25a12 ENSDARG00000102362 2773 1.486 - 0.727 - - - - - 0.759 - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
95. tmem176l.1 ENSDARG00000099491 860 1.486 - 0.711 - - - 0.775 - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
96. snx5 ENSDARG00000020442 2463 1.485 - 0.737 - - - - - 0.748 - sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
97. cnih cnih 8292 1.484 - 0.713 - - - - - - 0.771
98. map1lc3a ENSDARG00000033609 939 1.483 - 0.759 - - - 0.724 - - - microtubule-associated protein 1 light chain 3 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2232]
99. C19H1orf51 C19H1orf51 1776 1.48 - 0.716 - - - - 0.764 - -
100. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.475 - 0.708 - - - 0.767 - - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]

There are 1706 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA