Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-10a23.2

Gene Name Gene ID Reads Annotation
si:ch211-10a23.2 ENSDARG00000060656 471 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]










Genes with expression patterns similar to si:ch211-10a23.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-10a23.2 ENSDARG00000060656 471 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
2. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 3.243 - - - 0.889 - 0.806 0.822 - 0.726 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
3. dync1i1 ENSDARG00000060948 554 3.088 0.757 - - - - 0.824 0.747 - 0.760 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
4. pcdh19 ENSDARG00000034344 2378 3.048 - - - - - 0.800 0.752 0.706 0.790 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
5. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.047 - 0.829 - - - 0.767 0.717 - 0.734 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
6. rtca ENSDARG00000002215 3558 2.956 - - - - - 0.705 0.758 0.748 0.745 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
7. lhx9 ENSDARG00000056979 249 2.729 - - - 0.955 - - - 0.928 0.846 LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
8. CABZ01028287.1 CABZ01028287.1 626 2.624 - - - - - 0.935 0.896 - 0.793
9. SPTBN4_1 ENSDARG00000092624 473 2.62 - - - 0.944 - 0.912 - - 0.764 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
10. C8H1orf106 C8H1orf106 2690 2.611 - - - 0.868 - 0.835 0.908 - -
11. foxg1a ENSDARG00000070769 928 2.572 - - - - 0.767 - - 0.909 0.896 forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
12. mb21d2a mb21d2a 421 2.547 - - - 0.924 - 0.875 0.748 - -
13. CDK5R1 CDK5R1 562 2.524 - - - 0.902 - 0.741 0.881 - -
14. tmie ENSDARG00000069423 305 2.503 - 0.895 - - - 0.785 0.823 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
15. gabrg2 ENSDARG00000053665 434 2.495 - 0.901 - - - 0.887 0.707 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
16. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.494 - - - 0.821 - 0.860 0.813 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
17. snap25b ENSDARG00000058117 469 2.493 - 0.920 - - - - 0.761 0.812 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
18. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.492 - - - 0.806 - 0.825 - - 0.861 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
19. inab ENSDARG00000053248 3239 2.48 - 0.953 - - - 0.821 - - 0.706 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
20. unc119b ENSDARG00000044362 1528 2.476 - - - 0.874 - - 0.842 - 0.760 unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
21. ndrg4 ENSDARG00000103937 1234 2.475 - 0.763 - 0.907 - - - - 0.805 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
22. syngr3a ENSDARG00000014871 405 2.473 - - - 0.933 - 0.803 0.737 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
23. hes2.2 ENSDARG00000068168 197 2.47 0.788 - - 0.962 - - - - 0.720 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
24. her4.3 ENSDARG00000070770 613 2.467 - - - - - 0.924 0.827 - 0.716 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
25. pou3f2a ENSDARG00000070220 817 2.452 - - - - - 0.820 0.807 - 0.825 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
26. elavl3 ENSDARG00000014420 8644 2.429 - - - 0.776 - 0.855 0.798 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
27. tmem35 ENSDARG00000052567 5685 2.428 - - - - - 0.830 0.823 - 0.775 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
28. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 2.419 0.861 - - - - - 0.795 - 0.763 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
29. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.408 - - - 0.779 - - 0.857 - 0.772 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
30. ercc3 ENSDARG00000002402 340 2.405 0.705 0.761 - 0.939 - - - - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
31. tmem136a ENSDARG00000024920 535 2.399 - - - 0.767 - 0.763 0.869 - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
32. marcksa ENSDARG00000004049 2518 2.389 - - - 0.875 - - 0.737 - 0.777 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
33. scamp5 scamp5 797 2.382 - 0.830 - 0.744 - 0.808 - - -
34. CLIP3 ENSDARG00000054456 734 2.377 - - - 0.886 - - 0.706 0.785 - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
35. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.356 - - - 0.814 - - 0.756 0.786 - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
36. cxxc4 ENSDARG00000077817 197 2.351 0.797 - - - - 0.785 - - 0.769 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
37. slc18a3a ENSDARG00000006356 1285 2.348 0.768 - - - - 0.827 0.753 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
38. SSX2IP SSX2IP 316 2.346 0.807 - - - - 0.767 0.772 - -
39. clstn1 ENSDARG00000031720 5286 2.341 0.750 - - - - 0.796 0.795 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
40. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.338 - - - - - 0.760 0.821 - 0.757 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
41. her8.2 ENSDARG00000069675 315 2.33 0.760 - - - - 0.834 0.736 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
42. apba1b ENSDARG00000074328 254 2.32 - - - - - 0.799 0.788 0.733 - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
43. nupl2 ENSDARG00000029043 105 2.317 - 0.784 - - - 0.735 0.798 - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
44. ephb3a ENSDARG00000031548 1872 2.297 - - - 0.831 - 0.751 0.715 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
45. sv2c ENSDARG00000059997 592 2.293 0.701 0.884 - - - 0.708 - - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
46. gpr98 gpr98 717 2.289 - - - 0.825 - 0.734 0.730 - -
47. foxn4 ENSDARG00000010591 2332 2.286 - - - - - 0.741 0.818 - 0.727 forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
48. CABZ01111990.1 CABZ01111990.1 4374 2.277 - - - - - 0.794 0.773 0.710 -
49. arhgap39 ENSDARG00000100007 344 2.27 - 0.706 - - - 0.850 - - 0.714 Rho GTPase activating protein 39 [Source:ZFIN;Acc:ZDB-GENE-041014-247]
50. FGFBP3 FGFBP3 993 2.261 - - - - - 0.778 0.733 - 0.750
51. fyna ENSDARG00000011370 1679 2.259 - 0.744 - - - 0.780 0.735 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
52. dpysl5a ENSDARG00000011141 1827 2.239 0.708 - - - - - 0.729 - 0.802 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
53. clvs2 ENSDARG00000053122 1390 2.238 - - - 0.758 - - 0.756 - 0.724 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
54. golga7ba ENSDARG00000036295 1460 2.232 - 0.709 - 0.782 - - 0.741 - - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
55. si:ch73-21g5.7 ENSDARG00000093156 9412 2.224 0.703 - - 0.724 - - 0.797 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
56. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 2.223 - - - - - 0.705 0.715 - 0.803 zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
57. atp6v0a1b ENSDARG00000015174 1052 2.216 - - - 0.720 - 0.788 0.708 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
58. gsx1 ENSDARG00000035735 1243 2.214 - - - - - 0.734 0.753 - 0.727 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
59. rap2ip rap2ip 681 2.205 - - - - - - 0.747 0.748 0.710
60. calca ENSDARG00000056590 150 2.174 0.707 - - - - 0.719 0.748 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
61. dpysl3 ENSDARG00000002587 4381 2.155 - - - - - 0.724 0.701 - 0.730 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
62. fam49a ENSDARG00000006672 939 1.828 - - - 0.935 - 0.893 - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
63. BX511121.1 ENSDARG00000029997 1774 1.823 - - - - - 0.934 0.889 - -
64. CABZ01051991.1 CABZ01051991.1 346 1.817 - - - 0.921 - - 0.896 - -
65. CABZ01029738.1 CABZ01029738.1 327 1.804 - - - - - 0.869 0.935 - -
66. snap91 ENSDARG00000098809 844 1.793 0.793 1.000 - - - - - - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
67. HTRA4 ENSDARG00000005943 77 1.772 - 0.855 - 0.917 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
68. st18 663 1.764 - - - 0.916 - - 0.848 - - suppression of tumorigenicity 18, zinc finger
69. zgc:112001 ENSDARG00000078034 93 1.756 - - - - - 0.911 0.845 - - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
70. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.739 - - - - - 0.955 0.784 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
71. sox19b ENSDARG00000040266 532 1.727 - - - - - 0.932 0.795 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
72. fam151b ENSDARG00000020024 255 1.72 0.798 - - 0.922 - - - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
73. rxrba ENSDARG00000078954 85 1.72 - - - 0.920 - 0.800 - - - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
74. mnx2b ENSDARG00000030350 484 1.719 - - - - - 0.957 0.762 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
75. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.718 - - - 0.845 - 0.873 - - - ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
76. GADD45G GADD45G 382 1.716 - - - - - 0.952 - 0.764 -
77. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.713 - 0.855 - - - 0.858 - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
78. sept5a ENSDARG00000013843 1206 1.713 - 0.896 - - - 0.817 - - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
79. pax6b ENSDARG00000045936 349 1.713 - - - - - 0.885 0.828 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
80. si:ch211-26b3.4 ENSDARG00000075491 50 1.711 0.797 - - - - 0.914 - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
81. AGO1 ENSDARG00000092644 4521 1.71 - - - - - 0.876 0.834 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
82. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.706 - - - - - 0.867 0.839 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
83. chrm3a ENSDARG00000071091 72 1.704 - - - - - 0.879 0.825 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
84. CU683901.1 CU683901.1 187 1.7 - - - 0.919 - 0.781 - - -
85. pmelb ENSDARG00000033760 206 1.7 - - - 0.962 0.738 - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
86. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.698 - - - - - 0.889 0.809 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
87. gpm6bb ENSDARG00000001676 2005 1.696 - - - 0.900 - - - - 0.796 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
88. insm1b ENSDARG00000053301 2032 1.691 - - - - - 0.923 - - 0.768 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
89. lmo1 ENSDARG00000034504 260 1.691 - - - 0.955 - 0.736 - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
90. neurog1 ENSDARG00000056130 3924 1.689 - - - - - 0.880 0.809 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
91. rusc1 ENSDARG00000078125 617 1.687 - 0.861 - - - - 0.826 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
92. im:7162084 im:7162084 665 1.685 - - - - - 0.884 0.801 - -
93. nefma ENSDARG00000021351 790 1.685 - 0.950 - - - 0.735 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
94. DTX3 DTX3 303 1.684 - - - 0.924 - 0.760 - - -
95. fezf2 ENSDARG00000070677 224 1.682 - - - 0.895 - - - - 0.787 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
96. faxcb ENSDARG00000078981 249 1.681 - - - - - 0.757 0.924 - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
97. si:dkey-72l17.6 ENSDARG00000102008 42 1.68 0.776 0.904 - - - - - - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
98. ncam2 ENSDARG00000017466 175 1.679 - - - - - 0.872 0.807 - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
99. UBE2QL1 ENSDARG00000079276 3474 1.679 - - - 0.782 - 0.897 - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
100. CABZ01084942.1 ENSDARG00000100332 69 1.677 - 0.819 - - - 0.858 - - -

There are 2383 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA