Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-108c6.2

Gene Name Gene ID Reads Annotation
si:ch211-108c6.2 14 si:ch211-108c6.2










Genes with expression patterns similar to si:ch211-108c6.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-108c6.2 14 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-108c6.2
2. BX927122.3 BX927122.3 19 2.847 - 1.000 - 0.847 - 1.000 - - -
3. panx1b ENSDARG00000014910, ENSDARG00000112399 136 2.754 - 1.000 - - - 0.754 1.000 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
4. TMEM136 TMEM136 13 2 - - - - - 1.000 1.000 - -
5. olfcg9 ENSDARG00000105189 1 2 - - - - - 1.000 1.000 - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
6. si:ch211-243a22.1 si:ch211-243a22.1 42 2 - 1.000 - - - 1.000 - - -
7. GABRA3 ENSDARG00000090883 5 2 - 1.000 - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
8. nid2b ENSDARG00000009471 4 2 - 1.000 - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
9. LRRK1_1 LRRK1_1 11 2 - 1.000 - - - 1.000 - - -
10. PCDH10 PCDH10 7 2 - 1.000 - - - 1.000 - - -
11. UBASH3B_1 UBASH3B_1 28 1.961 - 0.961 - - - - 1.000 - -
12. si:ch211-260c23.1 13 1.868 - - - - - 1.000 0.868 - - si:ch211-260c23.1, transcript variant X7
13. SLC5A10 ENSDARG00000074212 11 1.854 - - - - - - 1.000 - 0.854 solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
14. tdrd9 ENSDARG00000013453 22 1.843 - - - - 0.843 - 1.000 - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
15. igsf5 igsf5 85 1.821 - 1.000 - 0.821 - - - - -
16. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1.821 - 1.000 - 0.821 - - - - -
17. CCSER1 ENSDARG00000075919 16 1.813 - - - - - 1.000 - - 0.813 coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
18. si:dkey-19a16.2 ENSDARG00000058794 8 1.802 - 1.000 - 0.802 - - - - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
19. zgc:113516 20 1.8 - - - 0.800 - 1.000 - - - zgc:113516
20. stxbp6l ENSDARG00000028354, ENSDARG00000112083, ENSDARG00000113476 43 1.794 - - - - - 0.794 1.000 - - syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]
21. samd10b ENSDARG00000094377 18 1.778 - - - 0.778 - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
22. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.771 - 1.000 - - - 0.771 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
23. SNORA31 SNORA31 23 1.749 - 1.000 - - - - - - 0.749
24. sstr1a ENSDARG00000104922 22 1.749 - - - - 0.871 0.878 - - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
25. CABZ01073954.1 CABZ01073954.1 258 1.743 - 1.000 - - - - 0.743 - -
26. il21r il21r 74 1.743 - - - - - 1.000 0.743 - -
27. CU570987.1 CU570987.1 7 1.725 - - - - 0.871 - - - 0.854
28. SMARCA4 ENSDARG00000104339 48 1.717 - 1.000 - - - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
29. CU468142.1 CU468142.1 6 1.71 - - - - - 1.000 - 0.710 -
30. IKZF4 ENSDARG00000037068 36 1.644 - - - 0.802 - - 0.842 - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
31. CABZ01044356.1 CABZ01044356.1 36 1.612 - - - - - 0.749 0.863 - -
32. golga2 ENSDARG00000063197 30 1.605 - 0.794 - - 0.811 - - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
33. pax7b ENSDARG00000070818 282 1.601 - 0.866 - - - 0.735 - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
34. BX324131.3 BX324131.3 278 1.532 - 0.760 - - - 0.772 - - -
35. edil3 edil3 24 1.516 - - - - - 0.764 0.752 - -
36. SERINC4 ENSDARG00000044815 45 1.458 - - - - 0.709 0.749 - - - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
37. CLMN ENSDARG00000096867 73 1.443 - - - 0.716 - - 0.727 - - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
38. cdc42ep2 ENSDARG00000053959 32 1 - - - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
39. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
40. CU896645.1 CU896645.1 10 1 - - - - - 1.000 - - -
41. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
42. mucms1 ENSDARG00000069566 0 1 - - - - - 1.000 - - - mucin, multiple PTS and SEA group, member 1 [Source:ZFIN;Acc:ZDB-GENE-061009-17]
43. si:dkey-85k15.6 ENSDARG00000094385 4 1 - - - - - - 1.000 - - si:dkey-85k15.6 [Source:ZFIN;Acc:ZDB-GENE-100922-216]
44. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - - - - 1.000 - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
45. zgc:66455 ENSDARG00000052375 3 1 - 1.000 - - - - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
46. nmrk1 ENSDARG00000037913 18 1 - 1.000 - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
47. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
48. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
49. FBXO40_1 FBXO40_1 59 1 - 1.000 - - - - - - -
50. SAMHD1 ENSDARG00000071288 0 1 - 1.000 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
51. swsap1 ENSDARG00000093423 14 1 - 1.000 - - - - - - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
52. CHST15 ENSDARG00000074527 210 1 - - - - - - 1.000 - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
53. gpc2 ENSDARG00000104217 10 1 - 1.000 - - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
54. PLCXD1_3 PLCXD1_3 35 1 - - - - - - 1.000 - -
55. cdk5r1a ENSDARG00000037916 46 1 - 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
56. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
57. ptpn6_1 ENSDARG00000089043 22 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
58. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -
59. ccdc172 ENSDARG00000039937 1 1 - - - - - - 1.000 - - coiled-coil domain containing 172 [Source:ZFIN;Acc:ZDB-GENE-090313-1]
60. lrrc3 ENSDARG00000078415 0 1 - - - - - - 1.000 - - leucine rich repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-080327-13]
61. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
62. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - - 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
63. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
64. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
65. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
66. si:ch211-76l23.5 si:ch211-76l23.5 26 1 - - - - - 1.000 - - -
67. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
68. si:ch211-57m13.9 ENSDARG00000095884 10 1 - 1.000 - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
69. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
70. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
71. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
72. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
73. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
74. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
75. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
76. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - - - 1.000 - - -
77. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
78. scospondin ENSDARG00000067859 4 1 - - - - - - 1.000 - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
79. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
80. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
81. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
82. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
83. slc15a1a ENSDARG00000100315 23 1 - 1.000 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
84. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
85. ninj2 ENSDARG00000079824 1 1 - 1.000 - - - - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
86. cacng7b ENSDARG00000070624 18 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
87. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - - - - 1.000 - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
88. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
89. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - 1.000 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
90. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
91. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
92. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
93. frmd7 ENSDARG00000068958 1 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
94. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
95. cdh15 ENSDARG00000068191, ENSDARG00000112512, ENSDARG00000116974 121 1 - - - - - - 1.000 - - cadherin 15, type 1, M-cadherin (myotubule) [Source:ZFIN;Acc:ZDB-GENE-030131-780]
96. C14orf80 C14orf80 20 1 - - - - - 1.000 - - -
97. sez6l ENSDARG00000100594 35 1 - 1.000 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
98. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
99. CABZ01065246.2 CABZ01065246.2 45 1 - - - - - - 1.000 - -
100. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]

There are 1031 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA