Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-106n13.3

Gene Name Gene ID Reads Annotation
si:ch211-106n13.3 ENSDARG00000052633 3 si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]










Genes with expression patterns similar to si:ch211-106n13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-106n13.3 ENSDARG00000052633 3 4 - 1.000 - 1.000 1.000 - 1.000 - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
2. CABZ01067232.1 ENSDARG00000057408 1 2 - - - - 1.000 - 1.000 - - otolin-1-like [Source:NCBI gene;Acc:101886389]
3. si:ch211-240g9.1 36 2 - 1.000 - - - - 1.000 - - si:ch211-240g9.1
4. ccbl2 4 2 - - - - 1.000 - 1.000 - - cysteine conjugate-beta lyase 2, transcript variant X4
5. ENSDARG00000091766 ENSDARG00000091766 15 2 - - - - 1.000 - 1.000 - -
6. CR339051.1 CR339051.1 9 1.881 - - - - 0.881 - 1.000 - -
7. si:ch211-113a14.26_4 31 1.865 - - - 0.865 - - 1.000 - - si:ch211-113a14.26
8. bicc2 ENSDARG00000076557 77 1.843 - 1.000 - - - - 0.843 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
9. nrgna ENSDARG00000039626 50 1.822 - - - - 0.898 - 0.924 - - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
10. KIF21B ENSDARG00000009733 53 1.807 - - - 0.807 - - 1.000 - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
11. st8sia3 ENSDARG00000045301 3 1.803 - - - - 0.803 - 1.000 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
12. bon bon 20 1.791 - - - - 0.791 - 1.000 - -
13. shhb ENSDARG00000038867 338 1.711 - 0.944 - - - - 0.767 - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
14. BX548021.2 BX548021.2 4 1.704 - 0.704 - - 1.000 - - - -
15. si:ch211-213i16.4 8 1.704 - 0.704 - - - - 1.000 - - si:ch211-213i16.4, transcript variant X1
16. dusp3b ENSDARG00000060130 3 1.704 - 0.704 - - - - 1.000 - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
17. pappab ENSDARG00000059858 11 1.704 - 0.704 - - - - 1.000 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
18. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.694 - 0.864 - - - - 0.830 - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
19. BX088525.2 ENSDARG00000117222 11 1.671 - 0.864 - 0.807 - - - - -
20. camkvl ENSDARG00000057000 40 1.656 - - - - 0.778 - 0.878 - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
21. neurod neurod 1189 1.608 - 0.860 - - - - 0.748 - -
22. OTOS ENSDARG00000108475 180 1.601 - - - 0.720 0.881 - - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
23. zgc:171501 ENSDARG00000075375 11 1.561 - - - - 0.843 - 0.718 - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
24. adora1 adora1 149 1.543 - 0.704 - - - - 0.839 - -
25. nr4a2a ENSDARG00000017007 140 1.538 - - - - 0.772 - 0.766 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
26. NRSN2 NRSN2 57 1.531 - 0.704 - - - - 0.827 - -
27. SACS ENSDARG00000091042 15 1.469 - 0.704 - 0.765 - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
28. HDX ENSDARG00000079382 513 1.469 - 0.703 - - - - 0.766 - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
29. pih1d2 ENSDARG00000014849 389 1.469 - 0.703 - - - - 0.766 - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
30. dnajb2 ENSDARG00000058644 30 1.446 - 0.704 - - - - 0.742 - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
31. OGDHL ENSDARG00000079249 0 1 - - - - - - 1.000 - - oxoglutarate dehydrogenase like [Source:ZFIN;Acc:ZDB-GENE-111201-4]
32. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - - - - - 1.000 - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
33. U1_20 U1_20 0 1 - - - - - - 1.000 - -
34. CU928213.1 CU928213.1 0 1 - - - - 1.000 - - - -
35. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - 1.000 - -
36. ZNF337_17 ZNF337_17 12 1 - - - - 1.000 - - - -
37. samsn1b ENSDARG00000078647 8 1 - - - - 1.000 - - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
38. SCAMP5 SCAMP5 19 1 - - - - - - 1.000 - -
39. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1 - - - - - - 1.000 - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
40. bbs9 ENSDARG00000079217 4 1 - - - - 1.000 - - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
41. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1 - - - - - - 1.000 - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
42. znf423 ENSDARG00000095732 13 1 - - - - - - 1.000 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
43. si:dkey-150k17.2 si:dkey-150k17.2 40 1 - - - - - - 1.000 - -
44. PDE9A ENSDARG00000060280 58 1 - - - - - - 1.000 - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
45. ZNF835 ZNF835 6 1 - - - - 1.000 - - - -
46. PEG3_35 PEG3_35 52 1 - - - - - - 1.000 - -
47. arf3a ENSDARG00000070539 29 1 - - - - - - 1.000 - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
48. asf1ba ENSDARG00000101037 49 1 - - - - - - 1.000 - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
49. cog6 ENSDARG00000103149 39 1 - - - - - - 1.000 - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
50. si:dkey-197d18.1 si:dkey-197d18.1 4 1 - - - - 1.000 - - - -
51. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1 - - - - 1.000 - - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
52. cdk20 ENSDARG00000003867 27 1 - - - - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
53. si:dkey-27j5.5 ENSDARG00000026383 6 1 - - - - 1.000 - - - - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
54. CR626884.3 ENSDARG00000104648 1 1 - - - - 1.000 - - - -
55. myl9a ENSDARG00000038123 1207 1 - 1.000 - - - - - - - myosin, light chain 9a, regulatory [Source:ZFIN;Acc:ZDB-GENE-041010-120]
56. slc25a15a ENSDARG00000063539 50 1 - - - - 1.000 - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
57. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - 1.000 - - - -
58. PRICKLE2 PRICKLE2 69 1 - - - - - - 1.000 - -
59. HELZ2 ENSDARG00000012600 2 1 - - - - - - 1.000 - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
60. U6_24 U6_24 0 1 - - - - 1.000 - - - -
61. brinp3b ENSDARG00000075352 14 1 - - - - - - 1.000 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
62. CIT_1 CIT_1 6 1 - - - - 1.000 - - - -
63. EGR4_1 EGR4_1 14 1 - - - - - - 1.000 - -
64. znf652 ENSDARG00000062302 17 1 - 1.000 - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
65. cdc42ep2 ENSDARG00000053959 32 1 - - - - - - 1.000 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
66. lars2 ENSDARG00000075337 31 1 - - - - - - 1.000 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
67. unc5da ENSDARG00000092722 8 1 - 1.000 - - - - - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
68. DEPDC4 DEPDC4 1 1 - - - - 1.000 - - - -
69. CAMSAP2 CAMSAP2 109 1 - - - - - - 1.000 - -
70. URB1 ENSDARG00000060308 78 1 - - - - - - 1.000 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
71. si:ch211-229c8.13 ENSDARG00000067828 0 1 - - - - 1.000 - - - - si:ch211-229c8.13 [Source:ZFIN;Acc:ZDB-GENE-120214-7]
72. ptprc ENSDARG00000071437 104 1 - 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
73. si:dkey-96l17.6 ENSDARG00000094540 4 1 - - - - - - 1.000 - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
74. kdm2ba ENSDARG00000036593 96 1 - - - - - - 1.000 - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
75. rd3 ENSDARG00000031600 1085 1 - 1.000 - - - - - - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
76. BPHL ENSDARG00000102877 28 1 - - - - - - 1.000 - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
77. BX004816.4 BX004816.4 33 1 - - - - 1.000 - - - -
78. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - - 1.000 - - - -
79. fhit_1 ENSDARG00000078195 91 1 - - - - - - 1.000 - - fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
80. fem1a ENSDARG00000067966 11 1 - 1.000 - - - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
81. ZC3H12A ENSDARG00000005271 5 1 - - - - 1.000 - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
82. ankdd1a ENSDARG00000098647 8 1 - - - - - - 1.000 - - ankyrin repeat and death domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-070615-8]
83. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - 1.000 - -
84. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - - - - - - 1.000 - -
85. wbscr27 wbscr27 70 1 - - - - - - 1.000 - -
86. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1 - - - - - - 1.000 - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
87. CR548631.2 CR548631.2 0 1 - - - - 1.000 - - - -
88. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - - - - 1.000 - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
89. baiap2l2 baiap2l2 30 1 - - - - - - 1.000 - -
90. CU302326.3 CU302326.3 6 1 - 1.000 - - - - - - -
91. TMBIM1 TMBIM1 2 1 - - - - - - 1.000 - -
92. crygm2e ENSDARG00000044875 1 1 - - - - 1.000 - - - - crystallin, gamma M2e [Source:ZFIN;Acc:ZDB-GENE-081105-116]
93. zgc:92275 ENSDARG00000034048 9 1 - - - - - - 1.000 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
94. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - - 1.000 - - - -
95. si:dkey-21o19.2 ENSDARG00000088900 52 1 - - - - - - 1.000 - - si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
96. CU457819.2 ENSDARG00000105374 8 1 - - - - 1.000 - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
97. cd44a ENSDARG00000087863 4 1 - - - - - - 1.000 - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
98. acoxl ENSDARG00000020149 14 1 - - - - - - 1.000 - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
99. UTS2R_1 UTS2R_1 1 1 - - - - 1.000 - - - -
100. pip4k2ab ENSDARG00000063544 1 1 - - - - 1.000 - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]

There are 846 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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