Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-106h11.3

Gene Name Gene ID Reads Annotation
si:ch211-106h11.3 ENSDARG00000027360 154 si:ch211-106h11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-296]










Genes with expression patterns similar to si:ch211-106h11.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-106h11.3 ENSDARG00000027360 154 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-106h11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-296]
2. ARSJ ENSDARG00000077590 684 1.863 - 0.967 - 0.896 - - - - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
3. got1l1 ENSDARG00000053644 49 1.814 - 0.849 - 0.965 - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
4. rasl12 ENSDARG00000002701 66 1.787 - - - 0.904 0.883 - - - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
5. ENKD1 ENSDARG00000043550 44 1.782 - 0.834 - 0.948 - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
6. CABZ01023255.1 ENSDARG00000099984 13 1.773 - 0.892 - - 0.881 - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
7. USP54 USP54 186 1.736 - - - 0.933 0.803 - - - -
8. gbgt1l1 ENSDARG00000025275 21 1.708 - 0.908 - - 0.800 - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
9. alkbh3 ENSDARG00000045606, ENSDARG00000097208 169 1.695 - 0.862 - 0.833 - - - - - alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-040801-254]
10. rnmtl1b 116 1.681 - - - 0.945 - - 0.736 - - RNA methyltransferase like 1b
11. larp6 1695 1.678 - 0.787 - 0.891 - - - - - La ribonucleoprotein domain family, member 6
12. nf1b ENSDARG00000004184 548 1.675 - 0.916 - - - - 0.759 - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
13. si:ch1073-280h16.1 si:ch1073-280h16.1 229 1.632 - 0.818 - 0.814 - - - - -
14. osbpl5 ENSDARG00000076002 1220 1.561 - 0.702 - 0.859 - - - - - oxysterol binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5872]
15. zgc:73340 823 1.515 - - - - 0.765 0.750 - - - zgc:73340
16. cacnb2b ENSDARG00000055565 20 1.503 - 0.772 - - - 0.731 - - - calcium channel, voltage-dependent, beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-129]
17. cog4 ENSDARG00000054264 785 1.493 - 0.706 - 0.787 - - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
18. CU302376.1 CU302376.1 141 1.48 - 0.735 - - - 0.745 - - -
19. marveld2b ENSDARG00000061651 459 1.452 - 0.704 - 0.748 - - - - - MARVEL domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-050208-54]
20. CR848745.1 CR848745.1 814 1.423 - 0.719 - - - - 0.704 - -
21. cyp2k18 ENSDARG00000104593 27 0.973 - - - 0.973 - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
22. NMUR1 NMUR1 30 0.97 - - - 0.970 - - - - -
23. ctsl.1 ENSDARG00000003902 25 0.97 - - - 0.970 - - - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
24. si:dkeyp-69e1.8 ENSDARG00000055731 35 0.968 - - - 0.968 - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
25. CR318603.2 ENSDARG00000105536 199 0.967 - - - 0.967 - - - - -
26. ABCD2_1 ABCD2_1 13 0.966 - - - 0.966 - - - - -
27. lifrb ENSDARG00000039863 102 0.965 - - - 0.965 - - - - - leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
28. ENSDARG00000032477 ENSDARG00000032477 18 0.965 - - - 0.965 - - - - -
29. CST7 CST7 22 0.962 - - - 0.962 - - - - -
30. CU694372.1 ENSDARG00000097988 105 0.962 - - - 0.962 - - - - -
31. CABZ01064972.1 ENSDARG00000098966 199 0.961 - - - 0.961 - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
32. pus3 ENSDARG00000028976 52 0.961 - - - 0.961 - - - - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
33. cx28.8 ENSDARG00000071042 62 0.961 - - - 0.961 - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
34. ftr64 ENSDARG00000101514 33 0.961 - - - 0.961 - - - - - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
35. CABZ01025393.1 CABZ01025393.1 37 0.959 - - - 0.959 - - - - -
36. usp37 ENSDARG00000040990 637 0.956 - 0.956 - - - - - - - ubiquitin specific peptidase 37 [Source:ZFIN;Acc:ZDB-GENE-061013-802]
37. BEND2 BEND2 92 0.953 - - - 0.953 - - - - -
38. ccdc59 ENSDARG00000045755 297 0.952 - 0.952 - - - - - - - coiled-coil domain containing 59 [Source:ZFIN;Acc:ZDB-GENE-041210-91]
39. srd5a3 ENSDARG00000043307 142 0.952 - - - 0.952 - - - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
40. sec22bb ENSDARG00000100435 33 0.951 - - - 0.951 - - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
41. pigv ENSDARG00000101952 173 0.949 - - - 0.949 - - - - - phosphatidylinositol glycan anchor biosynthesis, class V [Source:ZFIN;Acc:ZDB-GENE-121116-1]
42. si:ch211-278j3.3 ENSDARG00000020284 478 0.948 - - - 0.948 - - - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
43. si:rp71-7l19.6 si:rp71-7l19.6 12 0.948 - 0.948 - - - - - - -
44. adarb1a ENSDARG00000041609 476 0.947 - - - 0.947 - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
45. zgc:162936 ENSDARG00000069957 95 0.947 - - - 0.947 - - - - - zgc:162936 [Source:ZFIN;Acc:ZDB-GENE-030131-5253]
46. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.946 - - - 0.946 - - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
47. BX004890.2 BX004890.2 84 0.946 - 0.946 - - - - - - -
48. btr18 ENSDARG00000103618 39 0.946 - - - 0.946 - - - - - bloodthirsty-related gene family, member 18 [Source:ZFIN;Acc:ZDB-GENE-080213-2]
49. ENSDARG00000092910 ENSDARG00000092910 44 0.945 - - - 0.945 - - - - -
50. BX649494.1 BX649494.1 195 0.945 - 0.945 - - - - - - -
51. C9H2orf40 C9H2orf40 212 0.945 - - - 0.945 - - - - -
52. tm9sf1 ENSDARG00000022970 113 0.944 - - - 0.944 - - - - - transmembrane 9 superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-64]
53. myo18ab ENSDARG00000061862 124 0.942 - - - 0.942 - - - - - myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
54. CR383676.3_1 CR383676.3_1 177 0.937 - - - 0.937 - - - - -
55. GABRR1 ENSDARG00000043902 71 0.937 - - - 0.937 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
56. fgf24 ENSDARG00000037677 242 0.936 - - - 0.936 - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
57. rasl10a ENSDARG00000062314 207 0.936 - - - 0.936 - - - - - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
58. IP6K1 ENSDARG00000073744 524 0.936 - - - 0.936 - - - - - inositol hexakisphosphate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-110317-2]
59. CR388132.2 ENSDARG00000104041 640 0.935 - - - 0.935 - - - - -
60. batf3 ENSDARG00000042577 34 0.934 - - - 0.934 - - - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
61. CC2D1A 1262 0.934 - - - 0.934 - - - - - coiled-coil and C2 domain containing 1A, transcript variant X2
62. iah1 ENSDARG00000015765 326 0.931 - 0.931 - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
63. si:rp71-1i20.2 ENSDARG00000043198 113 0.93 - - - 0.930 - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
64. crp1 ENSDARG00000071454 31 0.929 - - - - - 0.929 - - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
65. ascc2 ENSDARG00000013058 228 0.929 - - - 0.929 - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
66. FAM26E FAM26E 79 0.928 - - - 0.928 - - - - -
67. slc16a12a ENSDARG00000017773 47 0.928 - - - 0.928 - - - - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
68. si:dkey-10p5.7 26 0.928 - 0.928 - - - - - - - si:dkey-10p5.7
69. hrh3 ENSDARG00000035942 32 0.927 - 0.927 - - - - - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
70. CABZ01074309.1 CABZ01074309.1 121 0.927 - - - 0.927 - - - - -
71. PAOX PAOX 251 0.926 - - - 0.926 - - - - -
72. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 0.926 - - - 0.926 - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
73. pdik1l ENSDARG00000056509 548 0.926 - - - 0.926 - - - - - PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]
74. pou5f3 ENSDARG00000044774 212 0.926 - 0.926 - - - - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
75. toporsb ENSDARG00000105028 1898 0.924 - - - 0.924 - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
76. si:dkey-287g12.6 ENSDARG00000096808 271 0.923 - - - 0.923 - - - - - si:dkey-287g12.6 [Source:ZFIN;Acc:ZDB-GENE-130603-36]
77. CR388046.3 ENSDARG00000105537 108 0.923 - - - 0.923 - - - - -
78. cybb ENSDARG00000056615 177 0.923 - - - 0.923 - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
79. ugt2b6 ugt2b6 111 0.922 - - - 0.922 - - - - -
80. CU462878.1 ENSDARG00000090072 352 0.922 - - - 0.922 - - - - - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
81. BX897726.3 BX897726.3 220 0.921 - - - 0.921 - - - - -
82. nr1d4b ENSDARG00000059370 243 0.921 - - - 0.921 - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
83. negr1 ENSDARG00000021607 1051 0.921 - 0.921 - - - - - - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
84. ppp6r2b ENSDARG00000069654 323 0.921 - 0.921 - - - - - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
85. mettl21a ENSDARG00000012051 86 0.921 - - - 0.921 - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
86. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.92 - - - 0.920 - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
87. ing1 ENSDARG00000019116 394 0.92 - - - 0.920 - - - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
88. zgc:77486 ENSDARG00000013711, ENSDARG00000093978, ENSDARG00000111468, ENSDARG00000116962 139 0.92 - 0.920 - - - - - - - zgc:77486 [Source:ZFIN;Acc:ZDB-GENE-040426-2056]
89. tln2a ENSDARG00000017901, ENSDARG00000104934 222 0.918 - - - 0.918 - - - - - talin 2a [Source:ZFIN;Acc:ZDB-GENE-040724-263]
90. tlx2 ENSDARG00000011273 870 0.917 - 0.917 - - - - - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
91. rapgef4 ENSDARG00000079872 142 0.916 - - - 0.916 - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
92. cyb5r4 ENSDARG00000020898 119 0.91 - 0.910 - - - - - - - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
93. si:ch211-57i17.2 ENSDARG00000093354 58 0.91 - - - - - 0.910 - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
94. si:ch211-110p13.3 si:ch211-110p13.3 197 0.91 - - - - - 0.910 - - -
95. si:dkeyp-80d11.1 ENSDARG00000101087 91 0.91 - - - - - 0.910 - - - si:dkeyp-80d11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4126]
96. C21HXorf40A C21HXorf40A 216 0.908 - - - 0.908 - - - - -
97. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 0.908 - 0.908 - - - - - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
98. Metazoa_SRP_9 Metazoa_SRP_9 26 0.908 - 0.908 - - - - - - -
99. C22H19orf10_1 C22H19orf10_1 30 0.908 - 0.908 - - - - - - -
100. HMGXB4 HMGXB4 209 0.908 - 0.908 - - - - - - -

There are 823 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA