Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-105d18.7

Gene Name Gene ID Reads Annotation
si:ch211-105d18.7 si:ch211-105d18.7 6










Genes with expression patterns similar to si:ch211-105d18.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-105d18.7 si:ch211-105d18.7 6 7 - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. si:ch211-283l16.1 ENSDARG00000112586 131 2.914 - - - - - 1.000 0.914 - 1.000 si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
3. si:dkey-259p7.1 si:dkey-259p7.1 59 2.824 - 1.000 - - - 1.000 0.824 - -
4. adipoqb ENSDARG00000100086 5 2 - - 1.000 - - - - - 1.000 adiponectin, C1Q and collagen domain containing, b [Source:ZFIN;Acc:ZDB-GENE-060825-220]
5. si:dkey-40n15.1 ENSDARG00000116117 1 2 - - 1.000 - - 1.000 - - - si:dkey-40n15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-64]
6. CU468142.1 CU468142.1 6 2 - - - 1.000 - 1.000 - - -
7. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 2 - - - - - 1.000 - - 1.000 zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
8. si:dkey-15f23.2 si:dkey-15f23.2 2 2 - - - - - 1.000 - - 1.000
9. arhgap23b ENSDARG00000026840 6 2 - - - 1.000 - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
10. PIAS1 PIAS1 13 1.992 - - - - 0.992 - - - 1.000
11. PCDH10 PCDH10 7 1.914 - - - - - 1.000 0.914 - -
12. top3b ENSDARG00000027586 8 1.914 - - - 1.000 - - 0.914 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
13. zp2.5 ENSDARG00000086522 15 1.914 - - - - - 1.000 0.914 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
14. bdkrb1 ENSDARG00000020744 4 1.914 - - - - - 1.000 0.914 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
15. nitr3a_1 ENSDARG00000110676 44 1.914 - - - - - 1.000 0.914 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
16. si:ch211-12e1.5 si:ch211-12e1.5 14 1.914 - - - - - 1.000 0.914 - -
17. wnt3a ENSDARG00000058822 5 1.889 - 0.975 - - - - 0.914 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
18. six7 ENSDARG00000070107 140 1.879 - - - 0.879 - 1.000 - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
19. cabp2b ENSDARG00000052277 119 1.872 - 1.000 - - - - 0.872 - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
20. grk1a ENSDARG00000058803 13 1.86 - 1.000 - - - - 0.860 - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
21. mctp1b ENSDARG00000060871 20 1.849 - - - - - 1.000 0.849 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
22. SLC35G1 ENSDARG00000063268 91 1.841 - 0.971 - - - - 0.870 - - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
23. CABZ01081747.2 CABZ01081747.2 9 1.839 - 1.000 - - - - 0.839 - -
24. igf1 ENSDARG00000094132 59 1.811 - - 0.811 - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
25. nbn ENSDARG00000040303 43 1.795 - - - - - 1.000 0.795 - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
26. trpm5 ENSDARG00000059792 3 1.783 - - 0.783 - - - - - 1.000 transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
27. si:dkey-167k11.3 si:dkey-167k11.3 3 1.783 - - 0.783 - - 1.000 - - -
28. CU302326.1 CU302326.1 1 1.783 - - 0.783 1.000 - - - - -
29. BX323882.1 ENSDARG00000101656 2 1.783 - - 0.783 - - - - - 1.000 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
30. ZNF70_10 ZNF70_10 0 1.783 - - 0.783 - - - - - 1.000
31. si:dkey-8o9.5 si:dkey-8o9.5 6 1.78 - 0.822 - - 0.958 - - - -
32. slc5a1 ENSDARG00000013871 4 1.778 - - - - - 0.864 0.914 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
33. nab1a ENSDARG00000042940 26 1.769 - - - - 0.919 0.850 - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]
34. npb ENSDARG00000078828 230 1.766 - - - - - - 0.872 - 0.894 neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
35. GM2A ENSDARG00000088439 55 1.766 - - - 1.000 - - 0.766 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
36. ucn3l ENSDARG00000087241 29 1.763 - 0.849 - - - - 0.914 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
37. DPYD DPYD 52 1.761 - 1.000 - - - 0.761 - - -
38. si:ch73-70k4.1 ENSDARG00000075915 69 1.752 - 0.812 - - 0.940 - - - - si:ch73-70k4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3788]
39. satb2 ENSDARG00000061885 6 1.742 - 0.828 - - - - 0.914 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
40. SLC35A3_1 SLC35A3_1 35 1.74 - 0.910 - - - - - - 0.830
41. si:ch211-203k16.3 ENSDARG00000069305 21 1.738 - 0.822 - - - - 0.916 - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
42. DMXL2 ENSDARG00000091293 3 1.733 - - - - - 1.000 - - 0.733 Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
43. LRRC71 LRRC71 11 1.73 - 0.730 - - - 1.000 - - -
44. BX640518.1 BX640518.1 24 1.73 - - - 0.730 - 1.000 - - -
45. HIVEP2 HIVEP2 87 1.719 - 0.973 - - - - 0.746 - -
46. si:ch73-389b16.2 ENSDARG00000103802 340 1.718 - 1.000 - - - 0.718 - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
47. FP017279.3 FP017279.3 31 1.702 - 0.707 - - 0.995 - - - -
48. si:ch211-233h19.2 ENSDARG00000042213 47 1.699 - - - 0.785 - - 0.914 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
49. gabrr2b ENSDARG00000014057 9 1.697 - - 0.783 - - - 0.914 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
50. pdcb ENSDARG00000017634 10 1.697 - - 0.783 - - - 0.914 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
51. si:ch211-190k17.13 si:ch211-190k17.13 48 1.683 - - - 0.769 - - 0.914 - -
52. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 1.678 - 0.916 - - - 0.762 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
53. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.649 - - 0.776 0.873 - - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
54. GALNTL6 ENSDARG00000040048 33 1.636 - - - - - 0.722 0.914 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
55. avpr2aa ENSDARG00000007436 43 1.627 - - - 0.713 - - 0.914 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
56. THAP6 THAP6 57 1.622 - - - - - 0.708 0.914 - -
57. CDC42EP1 CDC42EP1 50 1.605 - 0.783 - - - 0.822 - - -
58. NUFIP1 ENSDARG00000101024 229 1.593 - - - - - 0.704 0.889 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
59. hnrnpa3 ENSDARG00000059351 453 1.548 - 0.835 - - - 0.713 - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
60. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.529 - - - - - 0.708 0.821 - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
61. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 1.509 - - - - 0.731 - 0.778 - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
62. ZNF337_9 ZNF337_9 18 1.494 - - - - 0.734 - - - 0.760
63. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.49 - 0.740 - - - 0.750 - - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
64. spice1 ENSDARG00000004647 27 1.474 - - 0.706 - - - 0.768 - - spindle and centriole associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041212-64]
65. nsun4 ENSDARG00000021324 482 1.446 - 0.739 - - - - 0.707 - - NOL1/NOP2/Sun domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-041212-77]
66. coch ENSDARG00000024032 7 1 - 1.000 - - - - - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
67. CABZ01087111.1 CABZ01087111.1 42 1 - - - - - 1.000 - - -
68. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
69. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
70. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - - - - - - - 1.000
71. fgfbp2 fgfbp2 14 1 - - 1.000 - - - - - -
72. MON1B MON1B 1 1 - - - - - - - - 1.000
73. FBXO15 ENSDARG00000016897 4 1 - - - 1.000 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
74. cdadc1 ENSDARG00000036650 16 1 - 1.000 - - - - - - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
75. zgc:77880 ENSDARG00000030563 208 1 - 1.000 - - - - - - - zgc:77880 [Source:ZFIN;Acc:ZDB-GENE-040426-1901]
76. U1_1 U1_1 0 1 - - - 1.000 - - - - -
77. PEG3_27 PEG3_27 10 1 - 1.000 - - - - - - -
78. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -
79. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]
80. PEG3_10 PEG3_10 45 1 - 1.000 - - - - - - -
81. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
82. mxc ENSDARG00000024789 68 1 - 1.000 - - - - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
83. si:ch211-108c6.2 14 1 - - - - - 1.000 - - - si:ch211-108c6.2
84. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
85. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 - 1.000 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
86. PDE1A ENSDARG00000060875 0 1 - - - - - - - - 1.000 phosphodiesterase 1A, calmodulin-dependent [Source:ZFIN;Acc:ZDB-GENE-090831-2]
87. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
88. hcrt ENSDARG00000070932 4 1 - - - 1.000 - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
89. ZNF337_24 ZNF337_24 16 1 - 1.000 - - - - - - -
90. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
91. PLA2G4C_1 PLA2G4C_1 2 1 - - - 1.000 - - - - -
92. si:dkey-45e15.9 si:dkey-45e15.9 0 1 - - - - - 1.000 - - -
93. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
94. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
95. SYNGAP1_1 SYNGAP1_1 66 1 - 1.000 - - - - - - -
96. inpp5k inpp5k 2 1 - - - 1.000 - - - - -
97. dnase2 ENSDARG00000073893 141 1 - 1.000 - - - - - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
98. STX1A ENSDARG00000058994 0 1 - - - 1.000 - - - - - syntaxin 1A (brain) [Source:ZFIN;Acc:ZDB-GENE-100802-1]
99. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
100. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - 1.000 - - - - - - -

There are 1434 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA