Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-105d18.6

Gene Name Gene ID Reads Annotation
si:ch211-105d18.6 si:ch211-105d18.6 59










Genes with expression patterns similar to si:ch211-105d18.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-105d18.6 si:ch211-105d18.6 59 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 1.975 - 0.980 - - - 0.995 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
3. sowahcb ENSDARG00000059582 178 1.964 - 0.973 - - - 0.991 - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
4. RBMS1 RBMS1 258 1.939 - 0.960 - - - 0.979 - - -
5. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.905 - 0.923 - - - 0.982 - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
6. cmasb 499 1.902 - 0.977 - - - 0.925 - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
7. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.9 - 0.921 - - - 0.979 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
8. fam105bb fam105bb 1253 1.9 - 0.966 - - - 0.934 - - -
9. unc93a ENSDARG00000041554 427 1.877 - 0.943 - - - 0.934 - - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
10. si:dkey-228i19.34 si:dkey-228i19.34 43 1.873 - 0.998 - - - - - - 0.875
11. myh14 ENSDARG00000073732 502 1.861 - 0.892 - - - 0.969 - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
12. grk5 ENSDARG00000032801 490 1.853 - 0.955 - - - 0.898 - - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
13. litaf ENSDARG00000103483 217 1.851 0.923 - - - - 0.928 - - - lipopolysaccharide-induced TNF factor [Source:ZFIN;Acc:ZDB-GENE-040704-23]
14. fosb ENSDARG00000055751 170 1.84 - 0.849 - - - 0.991 - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
15. afap1 ENSDARG00000055284 730 1.808 - 0.915 - - - 0.893 - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
16. zdhhc9 ENSDARG00000060515 981 1.806 - 0.871 - - - 0.935 - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
17. ZC3H11A ENSDARG00000009754 281 1.788 - - - - - 0.992 0.796 - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
18. si:dkey-240e12.6 ENSDARG00000110137 674 1.781 - 0.790 - - - 0.991 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
19. eml2 ENSDARG00000008808 706 1.762 - 0.817 - - - 0.945 - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
20. ARSJ ENSDARG00000077590 684 1.761 - - - - - 0.946 0.815 - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
21. CABZ01085085.1 CABZ01085085.1 123 1.759 - 0.949 - - - - 0.810 - -
22. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.755 - 0.877 - - - 0.878 - - -
23. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 1.752 - 0.955 - - - - 0.797 - - regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
24. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.745 - 0.948 - - - 0.797 - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
25. grtp1b ENSDARG00000030269 24 1.732 0.925 - - - - - 0.807 - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
26. sptssa ENSDARG00000071203 2306 1.729 - 0.844 - - - 0.885 - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
27. elovl6l ENSDARG00000038639 1184 1.728 - 0.805 - - - 0.923 - - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
28. rab35 rab35 1287 1.724 - 0.795 - - - 0.929 - - -
29. snupn ENSDARG00000008395 507 1.721 0.762 0.959 - - - - - - - snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]
30. stc1 ENSDARG00000003303 28 1.715 0.828 - - - - - 0.887 - - stanniocalcin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-79]
31. cdc20 ENSDARG00000100741 3264 1.694 - 0.760 - - - 0.934 - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
32. wdfy4 ENSDARG00000077009 802 1.693 - 0.870 - - - 0.823 - - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
33. KSR1 KSR1 8 1.687 0.925 - 0.762 - - - - - -
34. BX537305.1 ENSDARG00000113834 10 1.687 0.880 - - - - - 0.807 - -
35. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.68 0.724 - - - - 0.956 - - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
36. BX000999.4_1 BX000999.4_1 222 1.676 0.722 0.954 - - - - - - -
37. si:ch211-199m9.2 si:ch211-199m9.2 9 1.646 0.839 - - - - - 0.807 - -
38. TMEM184B TMEM184B 1280 1.641 - 0.730 - - - 0.911 - - -
39. setd8b 2528 1.629 - 0.802 - - - 0.827 - - - SET domain containing (lysine methyltransferase) 8b
40. mapk13 ENSDARG00000058470 1001 1.623 - 0.721 - - - 0.902 - - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
41. bhlhe40 ENSDARG00000004060 2107 1.623 - 0.816 - - - 0.807 - - - basic helix-loop-helix family, member e40 [Source:ZFIN;Acc:ZDB-GENE-030131-3133]
42. gnpnat1 ENSDARG00000039892 709 1.62 - 0.761 - - - 0.859 - - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
43. CH25H ENSDARG00000045190 6 1.615 - - - - 0.888 - 0.727 - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
44. wtap ENSDARG00000042642 1779 1.61 - 0.900 - - - 0.710 - - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
45. RAPGEFL1 ENSDARG00000079912 1074 1.608 - 0.873 - - - 0.735 - - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
46. si:dkey-261e22.5 si:dkey-261e22.5 68 1.579 0.796 - - - - - - - 0.783
47. tmem50a ENSDARG00000015757 3244 1.579 - 0.783 - - - 0.796 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
48. rab11al ENSDARG00000014340 2116 1.578 - 0.876 - - - 0.702 - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
49. ap3s2 ENSDARG00000039882 2149 1.574 - 0.710 - - - 0.864 - - - adaptor related protein complex 3 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-040718-274]
50. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1.562 - 0.755 - - - - 0.807 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
51. eppk1 ENSDARG00000096359 4315 1.56 - 0.830 - - - 0.730 - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
52. kcnj13 ENSDARG00000043443 700 1.541 - 0.709 - - - 0.832 - - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
53. CR855387.1 CR855387.1 41 1.535 0.831 - - - - - - - 0.704
54. CARKD 1398 1.532 - 0.761 - - - 0.771 - - - carbohydrate kinase domain containing, transcript variant X7
55. si:ch211-232i5.3 ENSDARG00000086874 1256 1.495 - 0.792 - - - 0.703 - - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
56. myo6a ENSDARG00000044016 847 1.446 - 0.704 - - - 0.742 - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
57. pde3a ENSDARG00000004227 6 1 1.000 - - - - - - - - phosphodiesterase 3A, cGMP-inhibited [Source:ZFIN;Acc:ZDB-GENE-041210-23]
58. RNF207 RNF207 9 1 1.000 - - - - - - - -
59. rhoab ENSDARG00000094673 26 0.999 - - - - - 0.999 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
60. si:dkey-115f9.2 si:dkey-115f9.2 18 0.998 - - - - - 0.998 - - -
61. CT573322.1 CT573322.1 38 0.998 - 0.998 - - - - - - -
62. U3_5 U3_5 67 0.998 - 0.998 - - - - - - -
63. si:dkey-57h18.2 33 0.998 - - - - - 0.998 - - - si:dkey-57h18.2, transcript variant X1
64. CU929328.1 ENSDARG00000105332 31 0.998 - - - - - 0.998 - - -
65. CABZ01109624.1 CABZ01109624.1 25 0.998 - 0.998 - - - - - - -
66. CR759816.1 ENSDARG00000098977 27 0.998 - - - - - 0.998 - - -
67. slc6a19b ENSDARG00000056719 140 0.998 - - - - - 0.998 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
68. CIR1 ENSDARG00000099733 66 0.998 - - - - - 0.998 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
69. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.998 - - - - - 0.998 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
70. ZP2 ZP2 14 0.998 - 0.998 - - - - - - -
71. si:ch211-39a7.1 ENSDARG00000037427 31 0.998 - 0.998 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
72. ankrd39 ENSDARG00000041350 73 0.998 - - - - - 0.998 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
73. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.997 - - - - - 0.997 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
74. pcgf5b ENSDARG00000052388 163 0.997 - - - - - 0.997 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
75. zgc:110286 92 0.997 - - - - - 0.997 - - - zgc:110286
76. ppapdc2 ppapdc2 67 0.997 - 0.997 - - - - - - -
77. bace2 ENSDARG00000044781 17 0.997 - - - - - 0.997 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
78. inhbab ENSDARG00000024759 29 0.997 - - - - - 0.997 - - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
79. si:dkey-154p10.3 ENSDARG00000068366 153 0.997 - 0.997 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
80. SLC38A9 ENSDARG00000032769 35 0.997 - 0.997 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
81. TDRD15 TDRD15 46 0.997 - - - - - 0.997 - - -
82. CR388047.3 ENSDARG00000117023 89 0.996 - 0.996 - - - - - - -
83. MAP3K2 ENSDARG00000062884 34 0.996 - 0.996 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
84. CU929417.2 CU929417.2 94 0.996 - - - - - 0.996 - - -
85. CABZ01072083.1 CABZ01072083.1 56 0.996 - - - - - 0.996 - - -
86. si:ch1073-155h21.1 ENSDARG00000007582 137 0.996 - 0.996 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
87. smdt1 smdt1 99 0.996 - 0.996 - - - - - - -
88. crybb3 ENSDARG00000041301 48 0.996 - - - - - 0.996 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
89. CR759791.3 CR759791.3 134 0.995 - - - - - 0.995 - - -
90. traf2b ENSDARG00000101036 429 0.995 - - - - - 0.995 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
91. egr3 ENSDARG00000089156 71 0.995 - - - - - 0.995 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
92. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.995 - - - - - 0.995 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
93. usp45 ENSDARG00000075013 227 0.995 - 0.995 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
94. C12H10orf2 C12H10orf2 245 0.995 - 0.995 - - - - - - -
95. CU302436.3 CU302436.3 174 0.995 - - - - - 0.995 - - -
96. ccdc173 ENSDARG00000077928 260 0.995 - - - - - 0.995 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
97. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.994 - - - - - 0.994 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
98. pgap2 ENSDARG00000044596 60 0.994 - 0.994 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
99. si:dkey-114b16.4 si:dkey-114b16.4 35 0.994 - 0.994 - - - - - - -
100. znf750 ENSDARG00000102267 327 0.994 - - - - - 0.994 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]

There are 1487 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA