Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-105c13.3

Gene Name Gene ID Reads Annotation
si:ch211-105c13.3 ENSDARG00000089441 13973 si:ch211-105c13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4483]










Genes with expression patterns similar to si:ch211-105c13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-105c13.3 ENSDARG00000089441 13973 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 si:ch211-105c13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4483]
2. abracl ENSDARG00000042876 10208 2.568 0.897 - - - 0.838 - 0.833 - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
3. gabarapl2 ENSDARG00000027200 5120 2.461 0.902 0.791 - - - - 0.768 - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
4. sepw2b 3942 2.423 - - 0.778 - - 0.815 0.830 - - selenoprotein W, 2b
5. krt4 ENSDARG00000017624, ENSDARG00000115790 2008869 2.237 - - - - 0.751 0.706 0.780 - - keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
6. zgc:165571 zgc:165571 48791 2.162 0.743 - - - 0.709 0.710 - - -
7. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 1.79 0.920 - - - - - 0.870 - - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
8. tarbp2 ENSDARG00000070471 1946 1.77 0.892 - - - - - - - 0.878 TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
9. c3a c3a 6690 1.747 - - - - - - 0.896 - 0.851
10. sec61a1 ENSDARG00000021669 20408 1.737 - - - - - - 0.926 - 0.811 Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
11. renbp ENSDARG00000008931 1848 1.736 0.932 0.804 - - - - - - - renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
12. zgc:100868 ENSDARG00000004748 2582 1.733 - - - - - - 0.831 - 0.902 zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
13. stard10 ENSDARG00000097718 1041 1.729 0.881 0.848 - - - - - - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
14. f10 ENSDARG00000088581 4968 1.723 0.900 - - - - - 0.823 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
15. mid1ip1a ENSDARG00000041051 5425 1.709 - 0.848 - - - - 0.861 - - MID1 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-990415-81]
16. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 1.704 - 0.869 - - - - 0.835 - - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
17. c9 ENSDARG00000016319 3917 1.701 0.864 - - - - - 0.837 - - complement component 9 [Source:ZFIN;Acc:ZDB-GENE-050522-442]
18. CABZ01080098.1 ENSDARG00000110680 10942 1.681 - 0.801 - - - - 0.880 - -
19. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 1.677 0.923 - - - 0.754 - - - - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
20. CYHR1 ENSDARG00000061057 2625 1.676 - - - - 0.788 - - - 0.888 cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
21. svilb ENSDARG00000014651 4449 1.674 0.823 - - - - - 0.851 - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
22. ehd1a ENSDARG00000098853 1092 1.67 - 0.847 - - - - 0.823 - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
23. f5 ENSDARG00000055705 973 1.669 - 0.845 - - - - 0.824 - - coagulation factor V [Source:ZFIN;Acc:ZDB-GENE-030131-5531]
24. glrx ENSDARG00000028106 16225 1.664 0.906 - - - 0.758 - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
25. limk2 ENSDARG00000005104 2598 1.664 - 0.863 - - - - 0.801 - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
26. ildr1a ENSDARG00000103929 2390 1.657 0.882 - - - - - 0.775 - - immunoglobulin-like domain containing receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1412]
27. sidt2 ENSDARG00000045976 1997 1.657 - 0.780 - - - - 0.877 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
28. zgc:110843 ENSDARG00000073845 940 1.651 - 0.770 - - - - - - 0.881 zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
29. b3gnt2l ENSDARG00000068219 1875 1.649 - 0.872 - - - - 0.777 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
30. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 1.646 - 0.790 - - - - 0.856 - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
31. cst3 ENSDARG00000007795 13753 1.643 - 0.756 - - - - 0.887 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
32. pls3 ENSDARG00000037655 5175 1.641 - 0.879 - - - - 0.762 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
33. ppp2r2a ppp2r2a 5785 1.639 0.864 0.775 - - - - - - -
34. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.638 - 0.936 - - - - 0.702 - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
35. ep300b ENSDARG00000061108 5173 1.636 0.901 0.735 - - - - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
36. pcbd1 ENSDARG00000031981 3373 1.635 - 0.833 - - - - 0.802 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
37. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.634 0.903 0.731 - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
38. cpne1 ENSDARG00000075536 4063 1.632 0.880 - - - - - 0.752 - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
39. CTSA ENSDARG00000098114 1154 1.626 - 0.823 - - - - 0.803 - - cathepsin A [Source:ZFIN;Acc:ZDB-GENE-030131-537]
40. cebpb ENSDARG00000042725 3921 1.625 - 0.814 - - - - 0.811 - - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
41. perp ENSDARG00000063572 6423 1.624 0.889 - - - - - 0.735 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
42. gdap2 ENSDARG00000021569 1013 1.621 0.865 - - - - - 0.756 - - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
43. vtna ENSDARG00000055388 2635 1.621 0.893 0.728 - - - - - - - vitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
44. phgdh ENSDARG00000001873 8325 1.621 0.863 - - - - - 0.758 - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
45. CU633744.1 CU633744.1 2074 1.614 0.830 - - - - - 0.784 - -
46. olfml2a ENSDARG00000005648 1157 1.613 - 0.771 - - - - 0.842 - - olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
47. cers5 ENSDARG00000002365 2540 1.612 0.852 - - - - - 0.760 - - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
48. cd2ap ENSDARG00000015224 2830 1.61 0.899 - - - - - 0.711 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
49. lrrc59 ENSDARG00000071426, ENSDARG00000109955 1998 1.609 - 0.719 - - - - - - 0.890 leucine rich repeat containing 59 [Source:ZFIN;Acc:ZDB-GENE-040426-2547]
50. TSTA3 ENSDARG00000039666 1776 1.607 - 0.793 - - - - 0.814 - - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
51. tmbim4 ENSDARG00000014361 2549 1.606 - 0.715 - - - - - - 0.891 transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
52. dpydb ENSDARG00000010267 831 1.605 - 0.717 - - - - 0.888 - - dihydropyrimidine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-2459]
53. zgc:112964 ENSDARG00000101200 4751 1.605 - 0.806 - - 0.799 - - - - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
54. itih2 ENSDARG00000045516 1893 1.604 - 0.840 - - - - 0.764 - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1942]
55. tkt tkt 7203 1.603 0.724 - - - - - - - 0.879
56. klf5a 1072 1.6 - 0.837 - - - - 0.763 - - Kruppel-like factor 5a
57. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 1.6 0.891 0.709 - - - - - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
58. itgav ENSDARG00000006314 4277 1.598 - - - - - - 0.722 - 0.876 integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
59. arpc5b ENSDARG00000019062 2786 1.591 - 0.793 - - - - 0.798 - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
60. SERP1_1 ENSDARG00000076223 6668 1.591 0.795 - - - - - 0.796 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
61. arl4ca ENSDARG00000057606 4686 1.591 0.877 0.714 - - - - - - - ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
62. hoga1 ENSDARG00000018944 800 1.591 - 0.813 - - - - 0.778 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
63. C19H6orf62 C19H6orf62 2859 1.587 - 0.707 - - - - - - 0.880
64. C7H16orf87 C7H16orf87 5197 1.583 0.872 0.711 - - - - - - -
65. naga ENSDARG00000099313 2483 1.583 - 0.848 - - - - 0.735 - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
66. trim35-28 ENSDARG00000021021 1380 1.582 - 0.800 - - - - 0.782 - - tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
67. ugt1b4 ENSDARG00000097024 1848 1.579 - 0.847 - - - - 0.732 - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
68. CU633910.1 CU633910.1 828 1.577 - 0.781 - - - - 0.796 - -
69. actr2a ENSDARG00000052438 5838 1.576 0.850 - - - - - 0.726 - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
70. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 1.574 - 0.835 - - 0.739 - - - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
71. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.573 - 0.830 - - 0.743 - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
72. pof1b ENSDARG00000054060 2355 1.565 - - - - 0.717 - 0.848 - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
73. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.563 0.809 - - - - - 0.754 - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
74. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 1.563 - 0.774 - - - - 0.789 - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]
75. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.563 - 0.758 - - - - 0.805 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
76. shc1 ENSDARG00000075437 3278 1.562 - 0.768 - - - - 0.794 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
77. ppl ENSDARG00000101043 9196 1.562 - - 0.744 - - - 0.818 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
78. serpind1 ENSDARG00000021208 665 1.561 - 0.751 - - - - 0.810 - - serpin peptidase inhibitor, clade D (heparin cofactor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030711-2]
79. f2 ENSDARG00000036041 3129 1.558 0.837 0.721 - - - - - - - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
80. neu1 ENSDARG00000008832 2848 1.555 0.736 - - - - - 0.819 - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
81. oclna ENSDARG00000005108 3280 1.552 - 0.748 - - - - 0.804 - - occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
82. krt5 ENSDARG00000058371, ENSDARG00000112017 32812 1.552 - - - - 0.825 - 0.727 - - keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
83. BX957362.1 ENSDARG00000105682 1941 1.549 - 0.702 - - - - 0.847 - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
84. tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 1.548 - 0.782 - - - - 0.766 - - TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]
85. serinc2 ENSDARG00000056532 1406 1.542 - 0.731 - - - - 0.811 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
86. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 1.54 - 0.775 - - - - 0.765 - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
87. nucb2a ENSDARG00000036299, ENSDARG00000112218 10499 1.54 0.724 - - - - - 0.816 - - nucleobindin 2a [Source:ZFIN;Acc:ZDB-GENE-030826-14]
88. cyb5b ENSDARG00000099774 1224 1.539 - 0.705 - - - - 0.834 - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
89. g6pca.2 ENSDARG00000013721 2034 1.534 - 0.751 - - - - 0.783 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
90. msxd msxd 1750 1.533 - 0.827 - - - - 0.706 - -
91. mboat1 ENSDARG00000029356, ENSDARG00000114116 1793 1.532 - 0.792 - - - - 0.740 - - membrane bound O-acyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-98]
92. txn ENSDARG00000044125, ENSDARG00000116040 4758 1.531 - 0.717 - - - - 0.814 - - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
93. s100v1 ENSDARG00000070427 6633 1.53 - - 0.746 - - - 0.784 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
94. CU469577.1 ENSDARG00000102850 1232 1.528 - 0.812 - - - - 0.716 - -
95. mgst1 mgst1 2820 1.527 - 0.720 - - - - 0.807 - -
96. si:dkey-52k20.13 si:dkey-52k20.13 428 1.527 - 0.808 - - 0.719 - - - -
97. cables2a ENSDARG00000076964 1330 1.525 - 0.714 - - - - 0.811 - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
98. ftcd ENSDARG00000007421 2228 1.525 - 0.821 - - - - 0.704 - - formimidoyltransferase cyclodeaminase [Source:ZFIN;Acc:ZDB-GENE-030131-9643]
99. tspan7 ENSDARG00000015759 13891 1.522 0.740 - - - - - 0.782 - - tetraspanin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5435]
100. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.52 - - - - - - 0.726 - 0.794 ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]

There are 1403 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA