Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-100p3.1

Gene Name Gene ID Reads Annotation
si:ch211-100p3.1 si:ch211-100p3.1 1










Genes with expression patterns similar to si:ch211-100p3.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-100p3.1 si:ch211-100p3.1 1 2 - - 1.000 - - - - 1.000 -
2. CR847893.4 CR847893.4 2 1 - - 1.000 - - - - - -
3. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
4. SCAMP5 SCAMP5 19 1 - - 1.000 - - - - - -
5. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
6. si:busm1-180g5.7_1 si:busm1-180g5.7_1 0 1 - - 1.000 - - - - - -
7. BX927253.1 ENSDARG00000096072 1 1 - - - - - - - 1.000 -
8. ppp2r3a ENSDARG00000077722 7 1 - - 1.000 - - - - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
9. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
10. CABZ01079192.1 ENSDARG00000101629 23 1 - - 1.000 - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
11. si:ch211-155e24.2 si:ch211-155e24.2 0 1 - - 1.000 - - - - - -
12. BX511182.1 BX511182.1 8 1 - - 1.000 - - - - - -
13. SLC22A14 SLC22A14 24 1 - - 1.000 - - - - - -
14. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
15. CABZ01078849.1 CABZ01078849.1 0 1 - - 1.000 - - - - - -
16. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
17. CR339057.1 CR339057.1 7 1 - - - - - - - 1.000 -
18. CU693378.1 CU693378.1 0 1 - - 1.000 - - - - - -
19. si:dkey-109m8.1 si:dkey-109m8.1 2 1 - - - - - - - 1.000 -
20. si:dkey-156j15.1 ENSDARG00000109821 1 1 - - 1.000 - - - - - - si:dkey-156j15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-81]
21. BX119910.10 BX119910.10 0 1 - - 1.000 - - - - - -
22. CABZ01069012.1 CABZ01069012.1 0 1 - - 1.000 - - - - - -
23. 5S_rRNA_5 5S_rRNA_5 1 1 - - 1.000 - - - - - -
24. cdk20 ENSDARG00000003867 27 1 - - - - - - - 1.000 - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
25. si:busm1-228j01.6 ENSDARG00000041705 0 1 - - - - - - - 1.000 - si:busm1-228j01.6 [Source:ZFIN;Acc:ZDB-GENE-030616-396]
26. entpd8 ENSDARG00000005565 18 1 - - - - - - - 1.000 - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
27. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
28. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
29. CT583625.2 ENSDARG00000094770 57 1 - - 1.000 - - - - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
30. ZBED1_5 ZBED1_5 1 1 - - 1.000 - - - - - -
31. TMEM241 ENSDARG00000090685 11 1 - - 1.000 - - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
32. myo7bb ENSDARG00000077201 7 1 - - 1.000 - - - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
33. SNORA62_1 SNORA62_1 1 1 - - 1.000 - - - - - -
34. U1_51 U1_51 0 1 - - 1.000 - - - - - -
35. RECK ENSDARG00000090039 15 1 - - 1.000 - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
36. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - 1.000 - - - - - -
37. POLR2E POLR2E 1 1 - - 1.000 - - - - - -
38. ttll3 ENSDARG00000053728 7 1 - - - - - - - 1.000 - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
39. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
40. FBXO16 ENSDARG00000033949 10 1 - - 1.000 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
41. CABZ01044085.1 CABZ01044085.1 3 1 - - 1.000 - - - - - -
42. si:ch211-165f21.6 si:ch211-165f21.6 5 1 - - - - - - - 1.000 -
43. PEG3_28 PEG3_28 0 1 - - 1.000 - - - - - -
44. gata4 ENSDARG00000098952 11 1 - - 1.000 - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
45. viml ENSDARG00000044501 5 1 - - 1.000 - - - - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
46. si:ch211-213a13.5 ENSDARG00000071618 0 1 - - - - - - - 1.000 - si:ch211-213a13.5 [Source:ZFIN;Acc:ZDB-GENE-050208-711]
47. Metazoa_SRP_14 Metazoa_SRP_14 0 1 - - 1.000 - - - - - -
48. CMYA5 ENSDARG00000061379 65 1 - - 1.000 - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
49. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - 1.000 - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
50. si:dkey-151m22.9 si:dkey-151m22.9 6 1 - - 1.000 - - - - - -
51. si:dkey-237j11.3 ENSDARG00000094303 1 1 - - 1.000 - - - - - - si:dkey-237j11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-239]
52. si:ch211-152f22.2 si:ch211-152f22.2 0 1 - - 1.000 - - - - - -
53. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
54. PEG3_26 PEG3_26 0 1 - - 1.000 - - - - - -
55. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
56. MFAP4_5 MFAP4_5 4 1 - - 1.000 - - - - - -
57. UBXN11 ENSDARG00000053828 22 1 - - - - - - - 1.000 - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
58. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - 1.000 - - - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
59. CLPX CLPX 2 1 - - 1.000 - - - - - -
60. adgra1a ENSDARG00000054177 19 1 - - - - - - - 1.000 - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
61. SMU1 SMU1 3 1 - - 1.000 - - - - - -
62. si:dkey-153k10.6 10 1 - - 1.000 - - - - - - si:dkey-153k10.6, transcript variant X1
63. gzmk ENSDARG00000028780 1 1 - - 1.000 - - - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
64. guca1c ENSDARG00000030758 9 1 - - 1.000 - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
65. n6amt2 7 1 - - 1.000 - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
66. CABZ01024686.1 CABZ01024686.1 1 1 - - 1.000 - - - - - -
67. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - 1.000 - - - - - -
68. CR847893.2 CR847893.2 2 1 - - - - - - - 1.000 -
69. si:ch211-15j21.2 si:ch211-15j21.2 13 1 - - 1.000 - - - - - -
70. ms4a17a.6 ENSDARG00000007018 6 1 - - 1.000 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
71. ern2 ENSDARG00000058475 0 1 - - 1.000 - - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:ZFIN;Acc:ZDB-GENE-090312-15]
72. BX005082.1 ENSDARG00000098558 2 1 - - 1.000 - - - - - -
73. dennd6aa ENSDARG00000030239 1 1 - - 1.000 - - - - - - DENN/MADD domain containing 6Aa [Source:ZFIN;Acc:ZDB-GENE-041010-63]
74. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
75. AKNA_1 AKNA_1 2 1 - - 1.000 - - - - - -
76. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - 1.000 - - - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
77. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
78. agbl5 ENSDARG00000045900 2 1 - - 1.000 - - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
79. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
80. DXO ENSDARG00000036852 16 1 - - 1.000 - - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
81. ENSDARG00000075665 ENSDARG00000075665 5 1 - - 1.000 - - - - - -
82. DOCK9 ENSDARG00000114086 3 1 - - 1.000 - - - - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
83. TRIM35_2 TRIM35_2 0 1 - - - - - - - 1.000 -
84. pus7l ENSDARG00000069780 1 1 - - - - - - - 1.000 - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
85. DIAPH2 ENSDARG00000076060 1 1 - - 1.000 - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
86. CR388163.4 CR388163.4 4 1 - - 1.000 - - - - - -
87. gatsl3 7 1 - - - - - - - 1.000 - GATS protein-like 3
88. tenc1a tenc1a 3 1 - - 1.000 - - - - - -
89. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
90. phox2bb ENSDARG00000091029 2 1 - - 1.000 - - - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
91. slc34a1a ENSDARG00000028824 35 1 - - 1.000 - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
92. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - 1.000 - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
93. SUSD1 ENSDARG00000058839 4 1 - - 1.000 - - - - - - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
94. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - 1.000 - - - - - -
95. si:ch211-37p17.5 si:ch211-37p17.5 4 1 - - 1.000 - - - - - -
96. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - 1.000 - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
97. MON1B MON1B 1 1 - - - - - - - 1.000 -
98. CU694385.1 CU694385.1 1 1 - - 1.000 - - - - - -
99. AKAP13 ENSDARG00000079994 1 1 - - 1.000 - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
100. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -

There are 97 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA