Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-525h16.1

Gene Name Gene ID Reads Annotation
si:ch1073-525h16.1 si:ch1073-525h16.1 1










Genes with expression patterns similar to si:ch1073-525h16.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-525h16.1 si:ch1073-525h16.1 1 2 1.000 - - - - - 1.000 - -
2. slitrk2 ENSDARG00000006636 40 1.848 0.919 - - - - - 0.929 - - SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
3. znhit3 ENSDARG00000023950 61 1.798 1.000 - - - - - 0.798 - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
4. zgc:174224 ENSDARG00000093875 4 1.751 0.751 - - - - - 1.000 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
5. cnrip1b ENSDARG00000037337 39 1.732 0.732 - - - - - 1.000 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
6. LRFN4 LRFN4 59 1.718 1.000 - - - - - 0.718 - -
7. CDH12 CDH12 44 1.573 0.732 - - - - - 0.841 - -
8. si:dkey-54f18.2 si:dkey-54f18.2 27 1 1.000 - - - - - - - -
9. nfatc1 ENSDARG00000036168 16 1 - - - - - - 1.000 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
10. RNF214_1 RNF214_1 5 1 1.000 - - - - - - - -
11. ptf1a ENSDARG00000014479 349 1 - - - - - - 1.000 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
12. ctrl ENSDARG00000068680 18 1 1.000 - - - - - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
13. arhgap15 ENSDARG00000062349 28 1 1.000 - - - - - - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
14. oxtrl ENSDARG00000044175 10 1 1.000 - - - - - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
15. CIT_1 CIT_1 6 1 - - - - - - 1.000 - -
16. matn3a ENSDARG00000069245 2410 1 1.000 - - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
17. PLCXD1_2 PLCXD1_2 9 1 - - - - - - 1.000 - -
18. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 1.000 - - - - - - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
19. si:dkey-189j19.1 si:dkey-189j19.1 0 1 - - - - - - 1.000 - -
20. TRPC4_1 TRPC4_1 212 1 - - - - - - 1.000 - -
21. si:ch211-168h21.3 10 1 1.000 - - - - - - - - si:ch211-168h21.3
22. CABZ01090975.1 CABZ01090975.1 9 1 1.000 - - - - - - - -
23. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
24. ccdc24 ENSDARG00000038793 7 1 - - - - - - 1.000 - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
25. ccdc170 ENSDARG00000016161 18 1 - - - - - - 1.000 - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
26. si:ch73-127m5.3 si:ch73-127m5.3 1 1 1.000 - - - - - - - -
27. rcv1 rcv1 77 1 - - - - - - 1.000 - -
28. SYTL2 SYTL2 139 1 1.000 - - - - - - - -
29. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
30. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
31. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - - 1.000 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
32. hapln4 ENSDARG00000018542 10 1 - - - - - - 1.000 - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
33. gpr19 ENSDARG00000102226 17 1 - - - - - - 1.000 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
34. CMKLR1_1 CMKLR1_1 2 1 - - - - - - 1.000 - -
35. KRT18_1 KRT18_1 17 1 1.000 - - - - - - - -
36. pcyox1 ENSDARG00000103052 20 1 - - - - - - 1.000 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
37. BPIFC BPIFC 11 1 - - - - - - 1.000 - -
38. CR391967.1 CR391967.1 135 1 - - - - - - 1.000 - -
39. BX323876.2 ENSDARG00000104577 62 1 - - - - - - 1.000 - -
40. itga6l ENSDARG00000056018 1 1 - - - - - - 1.000 - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
41. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
42. sp5l ENSDARG00000115868 361 1 - - - - - - 1.000 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
43. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
44. edar ENSDARG00000099088 1 1 - - - - - - 1.000 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
45. BX004873.3 BX004873.3 59 1 - - - - - - 1.000 - -
46. SLC35A3_1 SLC35A3_1 35 1 1.000 - - - - - - - -
47. kif3cb ENSDARG00000079500 935 1 - - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
48. tbkbp1 ENSDARG00000061473 24 1 - - - - - - 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
49. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - - - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
50. FNDC7_1 FNDC7_1 3 1 - - - - - - 1.000 - -
51. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - - - 1.000 - -
52. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - - 1.000 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
53. BX511182.1 BX511182.1 8 1 1.000 - - - - - - - -
54. BX005421.3 ENSDARG00000114309 7 1 - - - - - - 1.000 - -
55. si:ch211-142k18.1 1 1 1.000 - - - - - - - - si:ch211-142k18.1
56. ccdc129 37 1 1.000 - - - - - - - - coiled-coil domain containing 129, transcript variant X2
57. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
58. C6H22orf23 C6H22orf23 15 1 - - - - - - 1.000 - -
59. ciz1a ENSDARG00000089781 20 1 - - - - - - 1.000 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
60. Metazoa_SRP_29 Metazoa_SRP_29 1 1 1.000 - - - - - - - -
61. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 1.000 - - - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
62. dnm2a ENSDARG00000069937 32 1 1.000 - - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
63. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - - - 1.000 - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
64. BX004994.2 BX004994.2 17 1 1.000 - - - - - - - -
65. si:dkey-239j18.3 ENSDARG00000089806 12918 1 - - - - - - 1.000 - - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
66. CU693369.1 CU693369.1 2 1 - - - - - - 1.000 - -
67. ZNF407 ENSDARG00000087536 6 1 1.000 - - - - - - - - zinc finger protein 407 [Source:ZFIN;Acc:ZDB-GENE-110411-123]
68. AL935293.1 AL935293.1 2 1 1.000 - - - - - - - -
69. si:ch73-83c10.2 si:ch73-83c10.2 22 1 - - - - - - 1.000 - -
70. ZP2_1 ZP2_1 7 1 - - - - - - 1.000 - -
71. rhoga ENSDARG00000068653 13 1 1.000 - - - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
72. lpar5b ENSDARG00000068638 2 1 1.000 - - - - - - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
73. DBNDD1 DBNDD1 43 1 - - - - - - 1.000 - -
74. sntb1 ENSDARG00000041729 163 1 1.000 - - - - - - - - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
75. WDR63 ENSDARG00000105093 13 1 - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
76. opa1 ENSDARG00000070801 57 1 1.000 - - - - - - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
77. cyp2k6 ENSDARG00000009874, ENSDARG00000098995 2 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1571]
78. CABZ01072037.1 CABZ01072037.1 2 1 1.000 - - - - - - - -
79. CABZ01064671.1 ENSDARG00000039935 21 1 - - - - - - 1.000 - -
80. CDHR5 CDHR5 2 1 1.000 - - - - - - - -
81. EIF4G3 EIF4G3 24 1 - - - - - - 1.000 - -
82. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
83. lrrc48 lrrc48 50 1 - - - - - - 1.000 - -
84. CR847906.1 ENSDARG00000099493 88 1 1.000 - - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
85. ptpn20 ENSDARG00000075459 1 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
86. zgc:195633_1 142 1 - - - - - - 1.000 - - zgc:195633
87. atoh7 ENSDARG00000069552 254 1 - - - - - - 1.000 - - atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
88. C1S_1 C1S_1 11 1 1.000 - - - - - - - -
89. gper gper 4 1 1.000 - - - - - - - -
90. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -
91. si:ch211-260b17.6 32 1 1.000 - - - - - - - - si:ch211-260b17.6
92. CNTNAP3 ENSDARG00000067824 25 1 - - - - - - 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
93. si:ch1073-307h15.1 si:ch1073-307h15.1 2 1 - - - - - - 1.000 - -
94. ZNF135_3 ZNF135_3 1 1 1.000 - - - - - - - -
95. nkiras2_1 ENSDARG00000052594 31 1 1.000 - - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
96. si:dkey-78i1.2 si:dkey-78i1.2 15 1 1.000 - - - - - - - -
97. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - - - - - - 1.000 - -
98. irak1 ENSDARG00000025949 19 1 - - - - - - 1.000 - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
99. zeb1a ENSDARG00000016788 48 1 - - - - - - 1.000 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
100. SYNPR ENSDARG00000037587 20 1 - - - - - - 1.000 - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]

There are 527 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA