Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-525h16.1

Gene Name Gene ID Reads Annotation
si:ch1073-525h16.1 si:ch1073-525h16.1 1










Genes with expression patterns similar to si:ch1073-525h16.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-525h16.1 si:ch1073-525h16.1 1 2 1.000 - - - - - 1.000 - -
2. slitrk2 ENSDARG00000006636 40 1.848 0.919 - - - - - 0.929 - - SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
3. znhit3 ENSDARG00000023950 61 1.798 1.000 - - - - - 0.798 - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
4. zgc:174224 ENSDARG00000093875 4 1.751 0.751 - - - - - 1.000 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
5. cnrip1b ENSDARG00000037337 39 1.732 0.732 - - - - - 1.000 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
6. LRFN4 LRFN4 59 1.718 1.000 - - - - - 0.718 - -
7. CDH12 CDH12 44 1.573 0.732 - - - - - 0.841 - -
8. zdhhc18a ENSDARG00000069807 8 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
9. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 - - - - - - 1.000 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
10. dnm2a ENSDARG00000069937 32 1 1.000 - - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
11. si:dkey-271j15.3 ENSDARG00000091627 88 1 - - - - - - 1.000 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
12. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
13. clock clock 32 1 - - - - - - 1.000 - -
14. MEX3D MEX3D 293 1 - - - - - - 1.000 - -
15. C6H22orf23 C6H22orf23 15 1 - - - - - - 1.000 - -
16. sez6l ENSDARG00000100594 35 1 - - - - - - 1.000 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
17. tbr1a ENSDARG00000076259 341 1 - - - - - - 1.000 - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
18. lpar5b ENSDARG00000068638 2 1 1.000 - - - - - - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
19. si:dkey-30f3.2 ENSDARG00000098087 6 1 1.000 - - - - - - - - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
20. ZNF407 ENSDARG00000087536 6 1 1.000 - - - - - - - - zinc finger protein 407 [Source:ZFIN;Acc:ZDB-GENE-110411-123]
21. rhoga ENSDARG00000068653 13 1 1.000 - - - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
22. or135-1 ENSDARG00000053648 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 135, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-32]
23. carm1l ENSDARG00000091531 13 1 1.000 - - - - - - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
24. si:dkey-20j10.2 si:dkey-20j10.2 8 1 - - - - - - 1.000 - -
25. BX897714.3 BX897714.3 3 1 1.000 - - - - - - - -
26. si:dkeyp-46h3.8 ENSDARG00000093704 9 1 1.000 - - - - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
27. CABZ01090975.1 CABZ01090975.1 9 1 1.000 - - - - - - - -
28. si:dkey-258p11.1 si:dkey-258p11.1 48 1 - - - - - - 1.000 - -
29. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
30. cyp2k6 ENSDARG00000009874, ENSDARG00000098995 2 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1571]
31. hapln4 ENSDARG00000018542 10 1 - - - - - - 1.000 - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
32. PRR12 PRR12 38 1 - - - - - - 1.000 - -
33. eomesa ENSDARG00000006640 257 1 - - - - - - 1.000 - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
34. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
35. fam129ab ENSDARG00000023053 1 1 1.000 - - - - - - - - family with sequence similarity 129, member Ab [Source:ZFIN;Acc:ZDB-GENE-070912-688]
36. DUSP13_1 DUSP13_1 425 1 1.000 - - - - - - - -
37. CABZ01072557.1 CABZ01072557.1 9 1 1.000 - - - - - - - -
38. cart4 ENSDARG00000070142 55 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
39. fzd8b ENSDARG00000038569, ENSDARG00000110687 52 1 - - - - - - 1.000 - - frizzled class receptor 8b [Source:ZFIN;Acc:ZDB-GENE-000328-4]
40. C25H19orf40 C25H19orf40 17 1 1.000 - - - - - - - -
41. MSH4 ENSDARG00000075826 37 1 1.000 - - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
42. tceb3 40 1 1.000 - - - - - - - - transcription elongation factor B (SIII), polypeptide 3
43. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1 - - - - - - 1.000 - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
44. zbtb38 ENSDARG00000100607 17 1 - - - - - - 1.000 - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
45. npas4a ENSDARG00000055752 5 1 - - - - - - 1.000 - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
46. ccdc24 ENSDARG00000038793 7 1 - - - - - - 1.000 - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
47. PRPF6 ENSDARG00000091367 48 1 - - - - - - 1.000 - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
48. CR391967.1 CR391967.1 135 1 - - - - - - 1.000 - -
49. si:dkey-235h8.1 si:dkey-235h8.1 2457 1 - - - - - - 1.000 - -
50. CU633740.1 CU633740.1 8 1 - - - - - - 1.000 - -
51. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
52. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
53. CIT_1 CIT_1 6 1 - - - - - - 1.000 - -
54. ADAM12 ENSDARG00000116062 35 1 1.000 - - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
55. cx30.9 ENSDARG00000070362 17 1 1.000 - - - - - - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
56. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
57. matn3a ENSDARG00000069245 2410 1 1.000 - - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
58. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 1.000 - - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
59. si:ch211-113a14.18 ENSDARG00000051735 1253 1 - - - - - - 1.000 - - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
60. si:ch211-277p15.1 2 1 - - - - - - 1.000 - - si:ch211-277p15.1, transcript variant X5
61. ANGEL1 ENSDARG00000077567 38 1 - - - - - - 1.000 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
62. TBC1D10C ENSDARG00000037408 18 1 - - - - - - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
63. si:ch211-195i24.1 si:ch211-195i24.1 10 1 1.000 - - - - - - - -
64. ptpn20 ENSDARG00000075459 1 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
65. si:ch211-255g12.5 si:ch211-255g12.5 7 1 - - - - - - 1.000 - -
66. cyp3c4 ENSDARG00000070021 95 1 - - - - - - 1.000 - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
67. ccdc129 37 1 1.000 - - - - - - - - coiled-coil domain containing 129, transcript variant X2
68. CU468142.1 CU468142.1 6 1 - - - - - - 1.000 - -
69. sp5l ENSDARG00000115868 361 1 - - - - - - 1.000 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
70. ptpn6_1 ENSDARG00000089043 22 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
71. tbkbp1 ENSDARG00000061473 24 1 - - - - - - 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
72. CABZ01036418.1 CABZ01036418.1 0 1 - - - - - - 1.000 - -
73. si:ch211-113a14.26_2 0 1 - - - - - - 1.000 - - si:ch211-113a14.26
74. ZBTB42 ENSDARG00000102761 2 1 1.000 - - - - - - - - zinc finger and BTB domain containing 42 [Source:ZFIN;Acc:ZDB-GENE-130730-2]
75. FOXL2 239 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
76. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - 1.000 - -
77. ptk2ba ENSDARG00000022841 19 1 - - - - - - 1.000 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
78. tecta ENSDARG00000059558 15 1 1.000 - - - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
79. ccdc170 ENSDARG00000016161 18 1 - - - - - - 1.000 - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
80. ms4a17a.1 ENSDARG00000043798 7 1 1.000 - - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
81. WDR63 ENSDARG00000105093 13 1 - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
82. SLC9A3R2_1 SLC9A3R2_1 28 1 1.000 - - - - - - - -
83. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
84. zgc:195633_2 34 1 1.000 - - - - - - - - zgc:195633
85. si:ch211-142k18.1 1 1 1.000 - - - - - - - - si:ch211-142k18.1
86. fabp7b ENSDARG00000034650 397 1 - - - - - - 1.000 - - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
87. CABZ01064671.1 ENSDARG00000039935 21 1 - - - - - - 1.000 - -
88. RNF214_1 RNF214_1 5 1 1.000 - - - - - - - -
89. CU469531.1 ENSDARG00000067872 0 1 - - - - - - 1.000 - -
90. BX323876.2 ENSDARG00000104577 62 1 - - - - - - 1.000 - -
91. CABZ01072037.1 CABZ01072037.1 2 1 1.000 - - - - - - - -
92. rcv1 rcv1 77 1 - - - - - - 1.000 - -
93. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - - - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
94. EIF4G3 EIF4G3 24 1 - - - - - - 1.000 - -
95. sntb1 ENSDARG00000041729 163 1 1.000 - - - - - - - - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
96. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
97. ZP2_1 ZP2_1 7 1 - - - - - - 1.000 - -
98. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - - 1.000 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
99. RNF122 RNF122 29 1 1.000 - - - - - - - -
100. pvalb5 ENSDARG00000032836 242 1 1.000 - - - - - - - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]

There are 527 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA