Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-418f12.2

Gene Name Gene ID Reads Annotation
si:ch1073-418f12.2 si:ch1073-418f12.2 15










Genes with expression patterns similar to si:ch1073-418f12.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-418f12.2 si:ch1073-418f12.2 15 5 1.000 - - - 1.000 1.000 1.000 1.000 -
2. CABZ01117474.1 CABZ01117474.1 2 2 1.000 - - - - 1.000 - - -
3. zgc:172051 ENSDARG00000086569 12 1.995 - - - - - 1.000 0.995 - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
4. atg9b ENSDARG00000055292 155 1.995 - - - - - 1.000 0.995 - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
5. si:ch211-286e11.3 si:ch211-286e11.3 20 1.995 1.000 - - - - - 0.995 - -
6. si:ch73-280o22.2 ENSDARG00000077072 67 1.965 1.000 - - - - - 0.965 - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
7. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1.915 - - - - 0.915 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
8. KHNYN ENSDARG00000092488 10 1.912 1.000 - - - 0.912 - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
9. EMB ENSDARG00000059485 35 1.902 1.000 - - - - 0.902 - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
10. si:ch211-181d7.3 ENSDARG00000068621 87 1.758 - - - - - 0.820 0.938 - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
11. sptssb ENSDARG00000091658 42 1.755 0.775 - - - - - 0.980 - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
12. si:ch73-338a16.3 ENSDARG00000101159 18 1.71 - - - - - 0.715 0.995 - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
13. si:ch211-225h9.2 si:ch211-225h9.2 16 1.702 1.000 - - - - - 0.702 - -
14. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 1.643 - - - - - 0.702 0.941 - -
15. glg1b ENSDARG00000101210 177 1.615 - - - - 0.732 - 0.883 - - golgi glycoprotein 1b [Source:ZFIN;Acc:ZDB-GENE-060825-255]
16. CABZ01071530.2 CABZ01071530.2 47 1.598 0.715 - - - 0.883 - - - -
17. grhpra ENSDARG00000068264 49 1.568 0.764 - - - - 0.804 - - - glyoxylate reductase/hydroxypyruvate reductase a [Source:ZFIN;Acc:ZDB-GENE-040724-230]
18. pif1 ENSDARG00000020289 216 1.564 0.764 - - - - - 0.800 - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
19. kif6 ENSDARG00000053240 75 1.54 - - - - 0.755 0.785 - - - kinesin family member 6 [Source:ZFIN;Acc:ZDB-GENE-061027-130]
20. mvd mvd 105 1.524 - - - - - 0.709 0.815 - -
21. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 1.491 0.733 - - - - - 0.758 - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
22. eif2ak2 ENSDARG00000068729 184 1.464 0.743 - - - - - 0.721 - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
23. CDH7 16 1 1.000 - - - - - - - - cadherin 7, type 2, transcript variant X1
24. aglb ENSDARG00000100352 22 1 1.000 - - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
25. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 1.000 - - - - - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
26. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 1.000 - - - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
27. BX005472.1 BX005472.1 2 1 - - - - - 1.000 - - -
28. fndc7 fndc7 3 1 - - - - - 1.000 - - -
29. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1 1.000 - - - - - - - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
30. si:dkey-15h8.1 si:dkey-15h8.1 17 1 - - - - - 1.000 - - -
31. cpa2 ENSDARG00000010146 28 1 1.000 - - - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
32. BX119910.8 BX119910.8 6 1 1.000 - - - - - - - -
33. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
34. MPP3 MPP3 13 1 - - - - - 1.000 - - -
35. ripply2 ENSDARG00000070535 18 1 1.000 - - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
36. grifin ENSDARG00000033382 141 1 - - - - - 1.000 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
37. itprip ENSDARG00000015576 62 1 1.000 - - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
38. dcp2_1 ENSDARG00000104242 74 1 1.000 - - - - - - - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
39. TTF1_3 TTF1_3 215 1 1.000 - - - - - - - -
40. CABZ01074946.1 CABZ01074946.1 119 1 1.000 - - - - - - - -
41. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
42. si:dkey-24i24.3 ENSDARG00000088452 27 1 1.000 - - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
43. SH3RF3 ENSDARG00000102334 1 1 1.000 - - - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
44. si:ch73-44m9.1 ENSDARG00000077115 3 1 1.000 - - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
45. si:dkey-264b2.3 19 1 1.000 - - - - - - - - si:dkey-264b2.3, transcript variant X2
46. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
47. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
48. si:ch211-66k16.28 ENSDARG00000088423 80 1 - - - - - 1.000 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
49. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 1.000 - - - - - - - - RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
50. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
51. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
52. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
53. CABZ01081748.1 ENSDARG00000102139 31 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
54. sts ENSDARG00000053241 10 1 - - - - - 1.000 - - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
55. si:dkey-43k4.4 si:dkey-43k4.4 4 1 1.000 - - - - - - - -
56. fubp3 ENSDARG00000086896 21 1 1.000 - - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
57. TRIM14_5 TRIM14_5 2 1 - - - - - 1.000 - - -
58. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
59. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11
60. tnr ENSDARG00000020771 20 1 1.000 - - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
61. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
62. zgc:152857 ENSDARG00000041034 7 1 - - - - - 1.000 - - - zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
63. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
64. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
65. adra1bb ENSDARG00000041173, ENSDARG00000116032 5 1 - - - - - 1.000 - - - adrenoceptor alpha 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-51]
66. si:ch211-212b13.1 si:ch211-212b13.1 1 1 - - - - - 1.000 - - -
67. irg1 22 1 - - - - - 1.000 - - - immunoresponsive 1 homolog (mouse)
68. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
69. si:ch211-208f21.4 si:ch211-208f21.4 4 1 1.000 - - - - - - - -
70. stk32a ENSDARG00000079499 17 1 1.000 - - - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
71. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
72. si:ch211-284d12.1 si:ch211-284d12.1 1 1 1.000 - - - - - - - -
73. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 - - - - - 1.000 - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
74. lrp2b ENSDARG00000007906 23 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
75. si:dkey-40j3.3 ENSDARG00000103597 5 1 1.000 - - - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
76. RP1 ENSDARG00000077687 6 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
77. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
78. cx45.6 cx45.6 26 1 - - - - - 1.000 - - -
79. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
80. P2RY11 ENSDARG00000014929 75 1 1.000 - - - - - - - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
81. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
82. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
83. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
84. wnt5a ENSDARG00000104973 21 1 1.000 - - - - - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
85. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
86. got1 ENSDARG00000039093 1 1 1.000 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
87. PDE1C PDE1C 1 1 1.000 - - - - - - - -
88. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
89. CR382372.1 ENSDARG00000096684 2 1 1.000 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
90. sycp2 ENSDARG00000088950 3 1 1.000 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
91. CR352328.3 CR352328.3 9 1 1.000 - - - - - - - -
92. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - 1.000 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
93. tmem119a ENSDARG00000095259 1 1 - - - - - 1.000 - - - transmembrane protein 119a [Source:ZFIN;Acc:ZDB-GENE-060526-69]
94. CU457778.1 ENSDARG00000098976 38 1 - - - - - 1.000 - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
95. C25H11orf74 C25H11orf74 161 1 1.000 - - - - - - - -
96. CABZ01072096.1 ENSDARG00000079483 168 1 1.000 - - - - - - - -
97. ARHGEF40 ENSDARG00000078979 25 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
98. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
99. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
100. zgc:114037_2 11 1 1.000 - - - - - - - - zgc:114037

There are 862 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA