Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-418f12.2

Gene Name Gene ID Reads Annotation
si:ch1073-418f12.2 si:ch1073-418f12.2 15










Genes with expression patterns similar to si:ch1073-418f12.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-418f12.2 si:ch1073-418f12.2 15 5 1.000 - - - 1.000 1.000 1.000 1.000 -
2. CABZ01117474.1 CABZ01117474.1 2 2 1.000 - - - - 1.000 - - -
3. atg9b ENSDARG00000055292 155 1.995 - - - - - 1.000 0.995 - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
4. zgc:172051 ENSDARG00000086569 12 1.995 - - - - - 1.000 0.995 - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
5. si:ch211-286e11.3 si:ch211-286e11.3 20 1.995 1.000 - - - - - 0.995 - -
6. si:ch73-280o22.2 ENSDARG00000077072 67 1.965 1.000 - - - - - 0.965 - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
7. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1.915 - - - - 0.915 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
8. KHNYN ENSDARG00000092488 10 1.912 1.000 - - - 0.912 - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
9. EMB ENSDARG00000059485 35 1.902 1.000 - - - - 0.902 - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
10. si:ch211-181d7.3 ENSDARG00000068621 87 1.758 - - - - - 0.820 0.938 - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
11. sptssb ENSDARG00000091658 42 1.755 0.775 - - - - - 0.980 - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
12. si:ch73-338a16.3 ENSDARG00000101159 18 1.71 - - - - - 0.715 0.995 - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
13. si:ch211-225h9.2 si:ch211-225h9.2 16 1.702 1.000 - - - - - 0.702 - -
14. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 1.643 - - - - - 0.702 0.941 - -
15. glg1b ENSDARG00000101210 177 1.615 - - - - 0.732 - 0.883 - - golgi glycoprotein 1b [Source:ZFIN;Acc:ZDB-GENE-060825-255]
16. CABZ01071530.2 CABZ01071530.2 47 1.598 0.715 - - - 0.883 - - - -
17. grhpra ENSDARG00000068264 49 1.568 0.764 - - - - 0.804 - - - glyoxylate reductase/hydroxypyruvate reductase a [Source:ZFIN;Acc:ZDB-GENE-040724-230]
18. pif1 ENSDARG00000020289 216 1.564 0.764 - - - - - 0.800 - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
19. kif6 ENSDARG00000053240 75 1.54 - - - - 0.755 0.785 - - - kinesin family member 6 [Source:ZFIN;Acc:ZDB-GENE-061027-130]
20. mvd mvd 105 1.524 - - - - - 0.709 0.815 - -
21. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 1.491 0.733 - - - - - 0.758 - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
22. eif2ak2 ENSDARG00000068729 184 1.464 0.743 - - - - - 0.721 - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
23. myo7ab ENSDARG00000044632 1 1 - - - - - 1.000 - - - myosin VIIAb [Source:ZFIN;Acc:ZDB-GENE-091110-4]
24. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
25. PLD1 PLD1 158 1 1.000 - - - - - - - -
26. GRM5_1 GRM5_1 18 1 1.000 - - - - - - - -
27. cyp27a7 ENSDARG00000033802 216 1 1.000 - - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
28. spata2l ENSDARG00000068814 152 1 1.000 - - - - - - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
29. ZPLD1 ZPLD1 1 1 - - - - - 1.000 - - -
30. CU929052.1 CU929052.1 642 1 - - - - - 1.000 - - -
31. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5
32. si:dkey-80c24.1 ENSDARG00000070692 1 1 1.000 - - - - - - - - si:dkey-80c24.1 [Source:ZFIN;Acc:ZDB-GENE-061207-69]
33. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
34. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
35. crfb4 ENSDARG00000068711 51 1 - - - - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
36. OCEL1 OCEL1 27 1 - - - - - 1.000 - - -
37. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
38. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
39. tdo2b ENSDARG00000023176 8 1 1.000 - - - - - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
40. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 1.000 - - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
41. chpfb ENSDARG00000078037 30 1 - - - - - 1.000 - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
42. ablim1a ENSDARG00000060149 228 1 1.000 - - - - - - - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
43. si:dkey-43k4.4 si:dkey-43k4.4 4 1 1.000 - - - - - - - -
44. CU695221.1 CU695221.1 1 1 - - - - - 1.000 - - -
45. crispld1a ENSDARG00000077275 7 1 1.000 - - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
46. ARHGEF40 ENSDARG00000078979 25 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
47. xkr6 xkr6 286 1 1.000 - - - - - - - -
48. efemp2b_1 ENSDARG00000020811 77 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
49. OXLD1 8 1 1.000 - - - - - - - - oxidoreductase-like domain containing 1, transcript variant X1
50. CR847990.1 CR847990.1 21 1 1.000 - - - - - - - -
51. BX927308.3 BX927308.3 126 1 - - - - - 1.000 - - -
52. si:dkey-9i23.8 ENSDARG00000095407 1 1 - - - - - 1.000 - - - si:dkey-9i23.8 [Source:ZFIN;Acc:ZDB-GENE-090313-367]
53. si:dkey-15h8.1 si:dkey-15h8.1 17 1 - - - - - 1.000 - - -
54. mmrn2a ENSDARG00000076135 37 1 1.000 - - - - - - - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
55. CABZ01071909.3 CABZ01071909.3 14 1 - - - - - 1.000 - - -
56. ZNF512B ENSDARG00000071055 7 1 - - - - - 1.000 - - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
57. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1 1.000 - - - - - - - - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
58. MPP3 MPP3 13 1 - - - - - 1.000 - - -
59. glulc ENSDARG00000013227 6 1 - - - - - 1.000 - - - glutamate-ammonia ligase (glutamine synthase) c [Source:ZFIN;Acc:ZDB-GENE-060929-540]
60. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 1.000 - - - - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
61. lrp2b ENSDARG00000007906 23 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
62. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1 1.000 - - - - - - - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
63. CACNA2D1_1 ENSDARG00000073752 2 1 1.000 - - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
64. ENSDARG00000032477 ENSDARG00000032477 18 1 - - - - - 1.000 - - -
65. glcea ENSDARG00000005095 33 1 1.000 - - - - - - - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
66. si:ch211-30g3.8 si:ch211-30g3.8 10 1 - - - - - 1.000 - - -
67. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - - - - 1.000 - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
68. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
69. gpr19 ENSDARG00000102226 17 1 1.000 - - - - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
70. NUMA1 141 1 - - - - - 1.000 - - - nuclear mitotic apparatus protein 1, transcript variant X2
71. itprip ENSDARG00000015576 62 1 1.000 - - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
72. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 1 1.000 - - - - - - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
73. itfg2 ENSDARG00000002174 114 1 1.000 - - - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
74. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
75. cabp2a ENSDARG00000052016 19 1 - - - - - 1.000 - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
76. xrra1 ENSDARG00000089578 18 1 - - - - - 1.000 - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
77. hs6st3b ENSDARG00000069500 5 1 1.000 - - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
78. TRPM4 TRPM4 60 1 1.000 - - - - - - - -
79. IMPG2 IMPG2 1 1 1.000 - - - - - - - -
80. si:dkey-14o1.18 si:dkey-14o1.18 23 1 - - - - - 1.000 - - -
81. UNC13A UNC13A 36 1 1.000 - - - - - - - -
82. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
83. adprhl1 ENSDARG00000041589 34 1 1.000 - - - - - - - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
84. ARHGAP6 33 1 1.000 - - - - - - - - Rho GTPase activating protein 6
85. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
86. si:ch73-44m9.1 ENSDARG00000077115 3 1 1.000 - - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
87. CR394546.2 ENSDARG00000090061 3 1 1.000 - - - - - - - -
88. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
89. WDR6 ENSDARG00000078571 28 1 1.000 - - - - - - - - WD repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-081104-368]
90. BX927369.1 ENSDARG00000105047 21 1 - - - - - 1.000 - - -
91. BX530409.1 BX530409.1 65 1 1.000 - - - - - - - -
92. CABZ01072096.1 ENSDARG00000079483 168 1 1.000 - - - - - - - -
93. BX119910.8 BX119910.8 6 1 1.000 - - - - - - - -
94. otx1a 1607 1 - - - - - 1.000 - - - orthodenticle homeobox 1a
95. rapgef6 ENSDARG00000010945 3 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6972]
96. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
97. CU571315.2 ENSDARG00000101956 15 1 - - - - - 1.000 - - -
98. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11
99. si:dkey-151m22.9 si:dkey-151m22.9 6 1 1.000 - - - - - - - -
100. tmem151a ENSDARG00000079908 2 1 1.000 - - - - - - - - transmembrane protein 151A [Source:ZFIN;Acc:ZDB-GENE-091118-118]

There are 862 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA